BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008829
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ...   188   1e-45
ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycin...   154   3e-35
ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I sub...   151   1e-34
ref|XP_003554366.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   140   3e-31
gb|ACA24493.1| TFIIS domain-containing protein [Cucumis sativus]      138   2e-30

>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
           gi|357470681|ref|XP_003605625.1| DNA-directed RNA
           polymerase I subunit RPA12 [Medicago truncatula]
           gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
           gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
          Length = 115

 Score =  188 bits (477), Expect = 1e-45
 Identities = 89/114 (78%), Positives = 94/114 (82%)
 Frame = +2

Query: 191 YSRGRDFSFCRLCGTMLTVPSTEYAECPLCKSRQNIKDIRGKEISYTISAXXXXXXXXXX 370
           YSRGRDF FC LCGTMLTVPST+YA CPLCK++ NIKDI+GKEISYTISA          
Sbjct: 2   YSRGRDFLFCHLCGTMLTVPSTDYALCPLCKTKCNIKDIKGKEISYTISAEDIRRELGID 61

Query: 371 XXXXQKVQLSKVNKKCEKCGHDEASFYTRQMRSADEGQTTFYTCTRCGHQFQEN 532
               QKVQLSKVNK CEKCGH EA+FYTRQMRSADEGQTTFYTCTRCGHQFQEN
Sbjct: 62  LIEEQKVQLSKVNKTCEKCGHGEAAFYTRQMRSADEGQTTFYTCTRCGHQFQEN 115


>ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycine max]
           gi|255632466|gb|ACU16583.1| unknown [Glycine max]
          Length = 116

 Score =  154 bits (388), Expect = 3e-35
 Identities = 78/117 (66%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
 Frame = +2

Query: 185 MAYSRGRDFSFCRLCGTMLTVPSTEYAECPLCKSRQNIKDIRGKEISYTISAXXXXXXXX 364
           MA SR  DF FC LCGTMLTVPSTEYA+CPLCK+R++I+DI  KEIS+TIS         
Sbjct: 1   MASSR-LDFLFCNLCGTMLTVPSTEYAQCPLCKTRRDIQDICDKEISFTISDEDIRRELG 59

Query: 365 XXXXXXQKV-QLSKVNKKCEKCGHDEASFYTRQMRSADEGQTTFYTCTRCGHQFQEN 532
                   V + SKV+KKCEKCGH EA++YTRQMRSADEGQTTFYTCT CGHQ QEN
Sbjct: 60  MEIIEEHAVMEYSKVSKKCEKCGHGEATYYTRQMRSADEGQTTFYTCTGCGHQSQEN 116


>ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           1 [Cucumis sativus] gi|449450516|ref|XP_004143008.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform 2 [Cucumis sativus]
           gi|449450518|ref|XP_004143009.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
           sativus] gi|449500372|ref|XP_004161079.1| PREDICTED:
           DNA-directed RNA polymerase I subunit RPA12-like isoform
           1 [Cucumis sativus] gi|449500375|ref|XP_004161080.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform 2 [Cucumis sativus]
           gi|449500379|ref|XP_004161081.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
           sativus]
          Length = 116

 Score =  151 bits (382), Expect = 1e-34
 Identities = 70/116 (60%), Positives = 87/116 (75%)
 Frame = +2

Query: 185 MAYSRGRDFSFCRLCGTMLTVPSTEYAECPLCKSRQNIKDIRGKEISYTISAXXXXXXXX 364
           MAYSRG DF FC LCGTML+  ST+Y ECP CKSR++ K+I G+EISYT++A        
Sbjct: 1   MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLG 60

Query: 365 XXXXXXQKVQLSKVNKKCEKCGHDEASFYTRQMRSADEGQTTFYTCTRCGHQFQEN 532
                 +K+QL+K  ++CEKCG+DEA F +RQMRSADEGQTTFYTCT+C HQ +EN
Sbjct: 61  ISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN 116


>ref|XP_003554366.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA12-like [Glycine max]
          Length = 116

 Score =  140 bits (354), Expect = 3e-31
 Identities = 71/117 (60%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = +2

Query: 185 MAYSRGRDFSFCRLCGTMLTVPSTEYAECPLCKSRQNIKDIRGKEISYTISAXXXXXXXX 364
           MA SR  DF FC LCGT+LTVPSTEYA+CPLCK+ ++++D+  KEIS+TI          
Sbjct: 1   MASSR-LDFLFCHLCGTLLTVPSTEYAQCPLCKTHRDMQDVCDKEISFTIHDEDIRKELG 59

Query: 365 XXXXXXQKV-QLSKVNKKCEKCGHDEASFYTRQMRSADEGQTTFYTCTRCGHQFQEN 532
                   V + S V KKC KCGH EA++YTRQMRSADEGQTTFYTCT CGHQ QEN
Sbjct: 60  MEIIEEHTVMEYSXVCKKCGKCGHGEATYYTRQMRSADEGQTTFYTCTGCGHQSQEN 116


>gb|ACA24493.1| TFIIS domain-containing protein [Cucumis sativus]
          Length = 116

 Score =  138 bits (347), Expect = 2e-30
 Identities = 66/116 (56%), Positives = 83/116 (71%)
 Frame = +2

Query: 185 MAYSRGRDFSFCRLCGTMLTVPSTEYAECPLCKSRQNIKDIRGKEISYTISAXXXXXXXX 364
           MAYSRG DF FC L GTML+  ST+Y ECP CKSR++ K+I G+EISYT++A        
Sbjct: 1   MAYSRGHDFLFCNLGGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIKKQLG 60

Query: 365 XXXXXXQKVQLSKVNKKCEKCGHDEASFYTRQMRSADEGQTTFYTCTRCGHQFQEN 532
                   +QL+K  ++CEKCG+DEA F +RQMRSADEGQTTFYTC++C  Q +EN
Sbjct: 61  ISLIDENNMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCSKCLPQTREN 116