BLASTX nr result

ID: Glycyrrhiza23_contig00008798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008798
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551474.1| PREDICTED: uncharacterized protein LOC100797...   251   6e-65
ref|XP_003537538.1| PREDICTED: nuclear pore complex protein Nup5...   244   4e-63
gb|AFK45985.1| unknown [Medicago truncatula]                          242   2e-62
ref|XP_003601806.1| Nuclear pore complex protein Nup54 [Medicago...   242   2e-62
gb|ACJ85361.1| unknown [Medicago truncatula]                          242   2e-62

>ref|XP_003551474.1| PREDICTED: uncharacterized protein LOC100797030 [Glycine max]
          Length = 391

 Score =  251 bits (640), Expect = 6e-65
 Identities = 123/127 (96%), Positives = 126/127 (99%)
 Frame = +1

Query: 1   RDVQAIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMESADR 180
           RDVQ IVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMESADR
Sbjct: 138 RDVQTIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMESADR 197

Query: 181 ERLWPQVVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIQRMKQK 360
           ERLWPQ+VQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWI+R+KQK
Sbjct: 198 ERLWPQLVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIKRLKQK 257

Query: 361 EQILQQR 381
           EQILQQR
Sbjct: 258 EQILQQR 264


>ref|XP_003537538.1| PREDICTED: nuclear pore complex protein Nup54-like [Glycine max]
          Length = 349

 Score =  244 bits (624), Expect = 4e-63
 Identities = 119/126 (94%), Positives = 124/126 (98%)
 Frame = +1

Query: 1   RDVQAIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMESADR 180
           RDVQ IVDAYK+DPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEA+GKL+GMES DR
Sbjct: 103 RDVQTIVDAYKDDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAIGKLQGMESPDR 162

Query: 181 ERLWPQVVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIQRMKQK 360
           ERLWPQ+VQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIQR+KQK
Sbjct: 163 ERLWPQLVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIQRLKQK 222

Query: 361 EQILQQ 378
           EQILQQ
Sbjct: 223 EQILQQ 228


>gb|AFK45985.1| unknown [Medicago truncatula]
          Length = 396

 Score =  242 bits (618), Expect = 2e-62
 Identities = 117/127 (92%), Positives = 124/127 (97%)
 Frame = +1

Query: 1   RDVQAIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMESADR 180
           RD+QAI+D+YKED GNPKYAFKHLLFSVT+PQFRVKPAGVSDIMWAEAMGKLEGMESADR
Sbjct: 127 RDIQAILDSYKEDAGNPKYAFKHLLFSVTDPQFRVKPAGVSDIMWAEAMGKLEGMESADR 186

Query: 181 ERLWPQVVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIQRMKQK 360
           ERLWPQ VQGFKDLSQRLK+QDEVIVSDAERL +TQSNVKMLQRHFQADTLPWIQR+KQK
Sbjct: 187 ERLWPQQVQGFKDLSQRLKLQDEVIVSDAERLSVTQSNVKMLQRHFQADTLPWIQRLKQK 246

Query: 361 EQILQQR 381
           EQILQQR
Sbjct: 247 EQILQQR 253


>ref|XP_003601806.1| Nuclear pore complex protein Nup54 [Medicago truncatula]
           gi|355490854|gb|AES72057.1| Nuclear pore complex protein
           Nup54 [Medicago truncatula]
          Length = 385

 Score =  242 bits (618), Expect = 2e-62
 Identities = 117/127 (92%), Positives = 124/127 (97%)
 Frame = +1

Query: 1   RDVQAIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMESADR 180
           RD+QAI+D+YKED GNPKYAFKHLLFSVT+PQFRVKPAGVSDIMWAEAMGKLEGMESADR
Sbjct: 127 RDIQAILDSYKEDAGNPKYAFKHLLFSVTDPQFRVKPAGVSDIMWAEAMGKLEGMESADR 186

Query: 181 ERLWPQVVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIQRMKQK 360
           ERLWPQ VQGFKDLSQRLK+QDEVIVSDAERL +TQSNVKMLQRHFQADTLPWIQR+KQK
Sbjct: 187 ERLWPQQVQGFKDLSQRLKLQDEVIVSDAERLSVTQSNVKMLQRHFQADTLPWIQRLKQK 246

Query: 361 EQILQQR 381
           EQILQQR
Sbjct: 247 EQILQQR 253


>gb|ACJ85361.1| unknown [Medicago truncatula]
          Length = 384

 Score =  242 bits (618), Expect = 2e-62
 Identities = 117/127 (92%), Positives = 124/127 (97%)
 Frame = +1

Query: 1   RDVQAIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMESADR 180
           RD+QAI+D+YKED GNPKYAFKHLLFSVT+PQFRVKPAGVSDIMWAEAMGKLEGMESADR
Sbjct: 127 RDIQAILDSYKEDAGNPKYAFKHLLFSVTDPQFRVKPAGVSDIMWAEAMGKLEGMESADR 186

Query: 181 ERLWPQVVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIQRMKQK 360
           ERLWPQ VQGFKDLSQRLK+QDEVIVSDAERL +TQSNVKMLQRHFQADTLPWIQR+KQK
Sbjct: 187 ERLWPQQVQGFKDLSQRLKLQDEVIVSDAERLSVTQSNVKMLQRHFQADTLPWIQRLKQK 246

Query: 361 EQILQQR 381
           EQILQQR
Sbjct: 247 EQILQQR 253


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