BLASTX nr result

ID: Glycyrrhiza23_contig00008726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008726
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   144   7e-33
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   144   7e-33
ref|XP_002530492.1| cell cycle control protein cwf22, putative [...   142   4e-32
emb|CBI38093.3| unnamed protein product [Vitis vinifera]              137   9e-31
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   137   9e-31

>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/78 (88%), Positives = 76/78 (97%)
 Frame = -3

Query: 328 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEVSLDEDIDPETSLDIFRPD 149
           DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQ+THEVSLDE+IDPE SLDIF+PD
Sbjct: 484 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEEIDPEISLDIFKPD 543

Query: 148 LNYMENEKRYEELKKTIL 95
            N++ENEKRYEELKK++L
Sbjct: 544 PNFLENEKRYEELKKSML 561


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/78 (88%), Positives = 76/78 (97%)
 Frame = -3

Query: 328 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEVSLDEDIDPETSLDIFRPD 149
           DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQ+THEVSLDE+IDPE SLDIF+PD
Sbjct: 500 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEEIDPEISLDIFKPD 559

Query: 148 LNYMENEKRYEELKKTIL 95
            N++ENEKRYEELKK++L
Sbjct: 560 PNFLENEKRYEELKKSML 577


>ref|XP_002530492.1| cell cycle control protein cwf22, putative [Ricinus communis]
           gi|223529949|gb|EEF31876.1| cell cycle control protein
           cwf22, putative [Ricinus communis]
          Length = 810

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/78 (87%), Positives = 75/78 (96%)
 Frame = -3

Query: 328 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEVSLDEDIDPETSLDIFRPD 149
           DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHE+SL EDIDPE +LDIF+PD
Sbjct: 401 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEISLQEDIDPEITLDIFKPD 460

Query: 148 LNYMENEKRYEELKKTIL 95
            +++ENEKRYEELKK+IL
Sbjct: 461 PDFLENEKRYEELKKSIL 478


>emb|CBI38093.3| unnamed protein product [Vitis vinifera]
          Length = 2607

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/78 (84%), Positives = 74/78 (94%)
 Frame = -3

Query: 328 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEVSLDEDIDPETSLDIFRPD 149
           DKRVQFLIEGLFAIRKAKFQG+PAVRPELDLVEQEDQLTHE+SL+E IDPE +LDIF+PD
Sbjct: 128 DKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVEQEDQLTHEISLEEKIDPEITLDIFKPD 187

Query: 148 LNYMENEKRYEELKKTIL 95
             ++E+EKRYEELKKTIL
Sbjct: 188 PQFLESEKRYEELKKTIL 205


>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/78 (84%), Positives = 74/78 (94%)
 Frame = -3

Query: 328 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEVSLDEDIDPETSLDIFRPD 149
           DKRVQFLIEGLFAIRKAKFQG+PAVRPELDLVEQEDQLTHE+SL+E IDPE +LDIF+PD
Sbjct: 404 DKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVEQEDQLTHEISLEEKIDPEITLDIFKPD 463

Query: 148 LNYMENEKRYEELKKTIL 95
             ++E+EKRYEELKKTIL
Sbjct: 464 PQFLESEKRYEELKKTIL 481


Top