BLASTX nr result

ID: Glycyrrhiza23_contig00008696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008696
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631087.1| HMG-Y-related protein A [Medicago truncatula...   115   1e-23
ref|XP_003533338.1| PREDICTED: uncharacterized protein LOC100788...    92   1e-16
ref|XP_003518169.1| PREDICTED: uncharacterized protein LOC100789...    92   1e-16
ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] g...    89   1e-15
ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|157062...    87   4e-15

>ref|XP_003631087.1| HMG-Y-related protein A [Medicago truncatula]
           gi|92870991|gb|ABE80152.1| High mobility group proteins
           HMG-I and HMG-Y; Linker histone, N-terminal [Medicago
           truncatula] gi|355525109|gb|AET05563.1| HMG-Y-related
           protein A [Medicago truncatula]
          Length = 422

 Score =  115 bits (289), Expect = 1e-23
 Identities = 81/192 (42%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
 Frame = -1

Query: 656 HPPYAEMIYRAIEALKEKDGSSKRAIGKYIEQAYRGLLPPEPAHSTLLAQHLKHLKSTGL 477
           HPPYAEMIY+AIEALKEKDGSSKRAIGKYIE  Y+ +LPPE  HSTLL QHL HLKS GL
Sbjct: 27  HPPYAEMIYKAIEALKEKDGSSKRAIGKYIEHVYKQVLPPE--HSTLLTQHLNHLKSAGL 84

Query: 476 LVMVXXXXXXXXXXXXXXXXPAAGSDDPTPHXXXXXXXXXXXXPNP------IQNAQPVF 315
           L+M                     SD    H              P      I NAQPVF
Sbjct: 85  LIMFKKSYKLPSSLPPPPTLNR--SDHSEAHLPFTPLTQRGRGRPPKHKPILIPNAQPVF 142

Query: 314 VSLGLSDDXXXXXXXXXXXXXXXXXXXXXXXGTAXXXXXXXXXXXXXXXXXXSGLKRRPG 135
           VSL                            G                    +GLKRRPG
Sbjct: 143 VSL-----------DPPPPTTAVEPVLSVKRGRGRPPGTFRSKSIKKPKSVSNGLKRRPG 191

Query: 134 RPPKIQSQPTVI 99
           RPPK QS PT +
Sbjct: 192 RPPKTQSHPTTV 203


>ref|XP_003533338.1| PREDICTED: uncharacterized protein LOC100788215 [Glycine max]
          Length = 477

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 49/64 (76%), Positives = 49/64 (76%)
 Frame = -1

Query: 656 HPPYAEMIYRAIEALKEKDGSSKRAIGKYIEQAYRGLLPPEPAHSTLLAQHLKHLKSTGL 477
           HPPYAEMIY AIEALKEKDGSSKRAI KYIEQ Y  L    P HS LL QHL HLKS GL
Sbjct: 38  HPPYAEMIYTAIEALKEKDGSSKRAIAKYIEQVYTQL---PPNHSDLLTQHLNHLKSRGL 94

Query: 476 LVMV 465
           L MV
Sbjct: 95  LQMV 98


>ref|XP_003518169.1| PREDICTED: uncharacterized protein LOC100789987 [Glycine max]
          Length = 484

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 49/64 (76%), Positives = 49/64 (76%)
 Frame = -1

Query: 656 HPPYAEMIYRAIEALKEKDGSSKRAIGKYIEQAYRGLLPPEPAHSTLLAQHLKHLKSTGL 477
           HPPYAEMIY AIEALKEKDGSSKRAI KYIEQ Y  L    P HS LL QHL HLKS GL
Sbjct: 223 HPPYAEMIYTAIEALKEKDGSSKRAIAKYIEQVYTQL---PPNHSNLLTQHLTHLKSRGL 279

Query: 476 LVMV 465
           L MV
Sbjct: 280 LQMV 283


>ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis]
           gi|223525178|gb|EEF27887.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 435

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 45/64 (70%), Positives = 49/64 (76%)
 Frame = -1

Query: 656 HPPYAEMIYRAIEALKEKDGSSKRAIGKYIEQAYRGLLPPEPAHSTLLAQHLKHLKSTGL 477
           HPPY +MIY AI ALKE+DGSSKRAI KYIE+ Y GL    P HS LL  HLK LK+TGL
Sbjct: 69  HPPYTDMIYAAITALKERDGSSKRAIAKYIERVYPGL---PPTHSALLTHHLKRLKNTGL 125

Query: 476 LVMV 465
           LVMV
Sbjct: 126 LVMV 129


>ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|15706274|emb|CAC69997.1| HMG
           I/Y like protein [Glycine max]
          Length = 413

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 44/64 (68%), Positives = 48/64 (75%)
 Frame = -1

Query: 656 HPPYAEMIYRAIEALKEKDGSSKRAIGKYIEQAYRGLLPPEPAHSTLLAQHLKHLKSTGL 477
           HPPY EMIY AI ALKEKDGSSKRAIGKY+EQ Y+ L    P HS LL  HL  LKS GL
Sbjct: 34  HPPYDEMIYTAIGALKEKDGSSKRAIGKYMEQVYKDL---PPTHSALLTHHLNRLKSAGL 90

Query: 476 LVMV 465
           L++V
Sbjct: 91  LILV 94


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