BLASTX nr result

ID: Glycyrrhiza23_contig00008575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008575
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48881.1| unknown [Medicago truncatula]                           78   7e-13
gb|AFK35502.1| unknown [Medicago truncatula]                           78   7e-13
ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
gb|ABK95784.1| unknown [Populus trichocarpa]                           68   9e-10
ref|XP_002532881.1| DAG protein, chloroplast precursor, putative...    67   2e-09

>gb|AFK48881.1| unknown [Medicago truncatula]
          Length = 217

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/65 (58%), Positives = 41/65 (63%)
 Frame = +1

Query: 109 RPSMARPSHAARFTAVRCRVNRAGGDXXXXXXXXXXXXXXXXERPPTDMAPLFPGCDYQH 288
           RPS   PS + RFT V+CRVNRAG                  ERPPTDMAPLFPGCDY+H
Sbjct: 28  RPSQVTPSSSFRFTTVQCRVNRAGNSTYSPLNSGNSNFS---ERPPTDMAPLFPGCDYEH 84

Query: 289 WLIVM 303
           WLIVM
Sbjct: 85  WLIVM 89


>gb|AFK35502.1| unknown [Medicago truncatula]
          Length = 217

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/65 (58%), Positives = 41/65 (63%)
 Frame = +1

Query: 109 RPSMARPSHAARFTAVRCRVNRAGGDXXXXXXXXXXXXXXXXERPPTDMAPLFPGCDYQH 288
           RPS   PS + RFT V+CRVNRAG                  ERPPTDMAPLFPGCDY+H
Sbjct: 28  RPSQVTPSSSFRFTTVQCRVNRAGNSTYSPLNSGNSNFS---ERPPTDMAPLFPGCDYEH 84

Query: 289 WLIVM 303
           WLIVM
Sbjct: 85  WLIVM 89


>ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|222852411|gb|EEE89958.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/58 (56%), Positives = 38/58 (65%)
 Frame = +1

Query: 130 SHAARFTAVRCRVNRAGGDXXXXXXXXXXXXXXXXERPPTDMAPLFPGCDYQHWLIVM 303
           S AARFT++RCRVNRAG                  +RPP +MAPLFPGCDY+HWLIVM
Sbjct: 60  SPAARFTSIRCRVNRAGNSGYSPLNSGSNFS----DRPPNEMAPLFPGCDYEHWLIVM 113


>gb|ABK95784.1| unknown [Populus trichocarpa]
          Length = 241

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/63 (49%), Positives = 40/63 (63%)
 Frame = +1

Query: 115 SMARPSHAARFTAVRCRVNRAGGDXXXXXXXXXXXXXXXXERPPTDMAPLFPGCDYQHWL 294
           S+ + ++  RFT++RCRVNRAG                  +RPP +MAPLFPGCDY+HWL
Sbjct: 55  SINKTTNPTRFTSIRCRVNRAGNSGYSPLNSGSNFS----DRPPNEMAPLFPGCDYEHWL 110

Query: 295 IVM 303
           IVM
Sbjct: 111 IVM 113


>ref|XP_002532881.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
           gi|223527366|gb|EEF29510.1| DAG protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 248

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
 Frame = +1

Query: 109 RPSMARPSHAA------RFTAVRCRVNRAGGDXXXXXXXXXXXXXXXXERPPTDMAPLFP 270
           R S+   SHA       RFT++RCRVNRAG                  +RPP +MAPLFP
Sbjct: 54  RRSLLPLSHAVHSIKPTRFTSIRCRVNRAGNSAYSPLNSGSNFS----DRPPNEMAPLFP 109

Query: 271 GCDYQHWLIVM 303
           GCDY+HWLIVM
Sbjct: 110 GCDYEHWLIVM 120


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