BLASTX nr result

ID: Glycyrrhiza23_contig00008472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008472
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33981.1| unknown [Lotus japonicus]                               79   3e-13
ref|XP_003531024.1| PREDICTED: RING-H2 finger protein ATL54-like...    76   3e-12
ref|XP_003541479.1| PREDICTED: putative RING-H2 finger protein A...    72   5e-11
gb|ACU18698.1| unknown [Glycine max]                                   71   9e-11
gb|AFK34021.1| unknown [Medicago truncatula]                           67   2e-09

>gb|AFK33981.1| unknown [Lotus japonicus]
          Length = 404

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/63 (69%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = +3

Query: 270 SKRVGGNGNLVTAAKGGSSSRT-RSLQSAPSSMKRSRSFNGKHLLSWYSRSQKKSNAPPL 446
           SKRV GN NL   +KG SS R+ R L+  PSSMKRSRS+NGK+LLSWYSRSQKK NA  L
Sbjct: 343 SKRVSGNENLAIISKGSSSFRSLRYLRGVPSSMKRSRSYNGKYLLSWYSRSQKKQNA-NL 401

Query: 447 RSF 455
           RSF
Sbjct: 402 RSF 404


>ref|XP_003531024.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
          Length = 358

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 45/62 (72%), Positives = 48/62 (77%)
 Frame = +3

Query: 270 SKRVGGNGNLVTAAKGGSSSRTRSLQSAPSSMKRSRSFNGKHLLSWYSRSQKKSNAPPLR 449
           SKRVGGNGNL T  KGGSSS      S+ SS+KRS SFN KHLLSWYSRSQ+K NA PLR
Sbjct: 305 SKRVGGNGNLAT--KGGSSSC-----SSTSSVKRSLSFNAKHLLSWYSRSQRKPNA-PLR 356

Query: 450 SF 455
           SF
Sbjct: 357 SF 358


>ref|XP_003541479.1| PREDICTED: putative RING-H2 finger protein ATL53-like [Glycine max]
          Length = 352

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/62 (67%), Positives = 46/62 (74%)
 Frame = +3

Query: 270 SKRVGGNGNLVTAAKGGSSSRTRSLQSAPSSMKRSRSFNGKHLLSWYSRSQKKSNAPPLR 449
           SKRV GN N   + KGGSSS      S+ SS+KRSRSFN KHLLSWYSRSQ+K NA PLR
Sbjct: 297 SKRVVGNVNGNLSTKGGSSS-----SSSSSSVKRSRSFNAKHLLSWYSRSQRKPNA-PLR 350

Query: 450 SF 455
           SF
Sbjct: 351 SF 352


>gb|ACU18698.1| unknown [Glycine max]
          Length = 352

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 42/62 (67%), Positives = 46/62 (74%)
 Frame = +3

Query: 270 SKRVGGNGNLVTAAKGGSSSRTRSLQSAPSSMKRSRSFNGKHLLSWYSRSQKKSNAPPLR 449
           SKRV GN N   + KGGSSS      S+ SS+KRSRSFN KHLLSWYSRSQ+K NA PLR
Sbjct: 297 SKRVVGNVNGNLSTKGGSSS-----SSSSSSVKRSRSFNTKHLLSWYSRSQRKPNA-PLR 350

Query: 450 SF 455
           SF
Sbjct: 351 SF 352


>gb|AFK34021.1| unknown [Medicago truncatula]
          Length = 360

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/62 (61%), Positives = 42/62 (67%)
 Frame = +3

Query: 270 SKRVGGNGNLVTAAKGGSSSRTRSLQSAPSSMKRSRSFNGKHLLSWYSRSQKKSNAPPLR 449
           SK+VG NGN+V            ++ SAP SM RSRSFNGKHLLS YS SQKK NAPP R
Sbjct: 312 SKKVGENGNMV------------NMHSAPCSMNRSRSFNGKHLLSLYSSSQKKKNAPP-R 358

Query: 450 SF 455
           SF
Sbjct: 359 SF 360


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