BLASTX nr result

ID: Glycyrrhiza23_contig00008458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008458
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236064.1| uncharacterized protein LOC100305996 [Glycin...   148   5e-34
ref|XP_003519385.1| PREDICTED: 60S acidic ribosomal protein P0-l...   147   7e-34
ref|XP_003621750.1| 60S acidic ribosomal protein P0 [Medicago tr...   147   7e-34
gb|AFK45016.1| unknown [Lotus japonicus]                              147   1e-33
ref|XP_003626217.1| 60S acidic ribosomal protein P0 [Medicago tr...   109   2e-22

>ref|NP_001236064.1| uncharacterized protein LOC100305996 [Glycine max]
           gi|255627221|gb|ACU13955.1| unknown [Glycine max]
          Length = 187

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = +3

Query: 3   VPLLVGNVALVFTKADLREVSKQVAKYKVVNPILMCPKYMSYDSYHTCSYMQSGQLPLGL 182
           VPLLVGNVAL+FTK DLREVS+Q+AKYKVV PILMCPKY SYD+Y  C+YMQSGQ+PLGL
Sbjct: 78  VPLLVGNVALIFTKGDLREVSEQIAKYKVVQPILMCPKYTSYDTYQNCTYMQSGQIPLGL 137

Query: 183 TCCQQQSSQASEPFLVCSKF 242
           TCC QQSSQASEPFLVCSKF
Sbjct: 138 TCCNQQSSQASEPFLVCSKF 157


>ref|XP_003519385.1| PREDICTED: 60S acidic ribosomal protein P0-like [Glycine max]
          Length = 187

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = +3

Query: 3   VPLLVGNVALVFTKADLREVSKQVAKYKVVNPILMCPKYMSYDSYHTCSYMQSGQLPLGL 182
           VPLLVGNVAL+FTK DLREVS+Q+AKYKVV PILMCPKY SYD+Y  C+YMQSGQLPLGL
Sbjct: 78  VPLLVGNVALIFTKGDLREVSEQIAKYKVVQPILMCPKYTSYDTYQNCTYMQSGQLPLGL 137

Query: 183 TCCQQQSSQASEPFLVCSKF 242
           TCC QQS+QASEPFLVCSKF
Sbjct: 138 TCCNQQSAQASEPFLVCSKF 157


>ref|XP_003621750.1| 60S acidic ribosomal protein P0 [Medicago truncatula]
           gi|355496765|gb|AES77968.1| 60S acidic ribosomal protein
           P0 [Medicago truncatula]
          Length = 188

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/80 (87%), Positives = 75/80 (93%)
 Frame = +3

Query: 3   VPLLVGNVALVFTKADLREVSKQVAKYKVVNPILMCPKYMSYDSYHTCSYMQSGQLPLGL 182
           VPLLVGNVAL+FTK DLR+VS+++AK KVVNPILMCPKYMSYDSY TCSYMQSGQLPLGL
Sbjct: 79  VPLLVGNVALIFTKGDLRDVSERIAKLKVVNPILMCPKYMSYDSYKTCSYMQSGQLPLGL 138

Query: 183 TCCQQQSSQASEPFLVCSKF 242
           TCC QQSSQASEPFLV SKF
Sbjct: 139 TCCNQQSSQASEPFLVSSKF 158


>gb|AFK45016.1| unknown [Lotus japonicus]
          Length = 187

 Score =  147 bits (370), Expect = 1e-33
 Identities = 68/80 (85%), Positives = 75/80 (93%)
 Frame = +3

Query: 3   VPLLVGNVALVFTKADLREVSKQVAKYKVVNPILMCPKYMSYDSYHTCSYMQSGQLPLGL 182
           VPLLVGNVAL+FTK DLREVS+Q+AKYKVV+PILMCPKYM+YDSY TCSY+QSGQLPLGL
Sbjct: 78  VPLLVGNVALIFTKGDLREVSEQIAKYKVVDPILMCPKYMTYDSYRTCSYLQSGQLPLGL 137

Query: 183 TCCQQQSSQASEPFLVCSKF 242
           TCC QQS+Q SEPFLV SKF
Sbjct: 138 TCCNQQSTQTSEPFLVSSKF 157


>ref|XP_003626217.1| 60S acidic ribosomal protein P0 [Medicago truncatula]
           gi|355501232|gb|AES82435.1| 60S acidic ribosomal protein
           P0 [Medicago truncatula]
          Length = 203

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +3

Query: 84  KVVNPILMCPKYMSYDSYHTCSYMQSGQLPLGLTCCQQQSSQASEPFLVCSKF 242
           KVVNPILMCPKYMSYDSY TCS+MQSGQLPLGLTCC QQSSQASEPFL+CSKF
Sbjct: 88  KVVNPILMCPKYMSYDSYKTCSFMQSGQLPLGLTCCNQQSSQASEPFLICSKF 140


Top