BLASTX nr result

ID: Glycyrrhiza23_contig00008438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008438
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539932.1| PREDICTED: ATP synthase mitochondrial F1 com...   433   e-119
ref|XP_003527426.1| PREDICTED: uncharacterized protein LOC100803...   382   e-103
ref|XP_004134937.1| PREDICTED: uncharacterized protein LOC101220...   369   1e-99
ref|XP_002272818.1| PREDICTED: ATP synthase mitochondrial F1 com...   369   1e-99
ref|XP_002305764.1| predicted protein [Populus trichocarpa] gi|2...   353   7e-95

>ref|XP_003539932.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1
            [Glycine max]
          Length = 251

 Score =  433 bits (1113), Expect = e-119
 Identities = 209/251 (83%), Positives = 227/251 (90%), Gaps = 2/251 (0%)
 Frame = -3

Query: 1030 MQRVSSTSKIWRSIASKAR-NLFLFNDP-GARSFSAVSVGVTAQKLHQPGIPCDFLKWGS 857
            MQRVS TS IWR+I SKAR N+F  NDP  ARSFSAV V   A+KLHQP IP DF KWGS
Sbjct: 1    MQRVSPTSTIWRTIVSKARKNVFFINDPFAARSFSAVPVVAAAKKLHQPEIPSDFQKWGS 60

Query: 856  LGFCRTSRFATGFNPLQRKPLDSIVDVERLKDRYPDDITSIWDDYHIGRGHVGASMKAKL 677
            +GFCRTS+FA+GFNPLQ KPLDSIVDV RLKDRYP+DI S+WDDYHIGRGH+GA+MKAKL
Sbjct: 61   VGFCRTSKFASGFNPLQPKPLDSIVDVHRLKDRYPEDIASVWDDYHIGRGHIGATMKAKL 120

Query: 676  YHLLEHRAKECRYFVIPLWRGSGYTTMFVQVQMPHMLFTGLEDYKARGTQAAPYYTVSFY 497
            YHLLEHRA ECRYFVIPLWRGSGYTTMFVQVQ PHM+FTGLEDYKARGTQAAPY+T++FY
Sbjct: 121  YHLLEHRASECRYFVIPLWRGSGYTTMFVQVQTPHMIFTGLEDYKARGTQAAPYFTLTFY 180

Query: 496  TEFAETKDLVLIRGDVVFTSKLTDSEAKWLLETAQSFYLNDVRYRLVERFNKETRDFEFK 317
            TEFAE+KDLVLIRGDVVFTSKLTD EAKWLLETAQSFYLND RY+LVERFN++T DFEFK
Sbjct: 181  TEFAESKDLVLIRGDVVFTSKLTDPEAKWLLETAQSFYLNDARYKLVERFNRQTHDFEFK 240

Query: 316  DVLQALDMPIL 284
            DVLQ LDMPIL
Sbjct: 241  DVLQVLDMPIL 251


>ref|XP_003527426.1| PREDICTED: uncharacterized protein LOC100803504 isoform 1 [Glycine
            max]
          Length = 237

 Score =  382 bits (980), Expect = e-103
 Identities = 193/252 (76%), Positives = 210/252 (83%), Gaps = 3/252 (1%)
 Frame = -3

Query: 1030 MQRVSSTSKIWRSIASKAR-NLFLFNDPGA-RSFSAVSV-GVTAQKLHQPGIPCDFLKWG 860
            MQRVS TSKIWR++ASKAR N+F  NDP A RSFSAV V   T +KLHQP IP  F KWG
Sbjct: 1    MQRVSQTSKIWRTVASKARINVFSINDPFASRSFSAVPVVAATTRKLHQPEIPSSFQKWG 60

Query: 859  SLGFCRTSRFATGFNPLQRKPLDSIVDVERLKDRYPDDITSIWDDYHIGRGHVGASMKAK 680
            S+GF RTS+FA+GFNPLQRKPLD               +  IW  YHIGRGH+GA+MKAK
Sbjct: 61   SVGFFRTSKFASGFNPLQRKPLD---------------LGRIWSTYHIGRGHIGATMKAK 105

Query: 679  LYHLLEHRAKECRYFVIPLWRGSGYTTMFVQVQMPHMLFTGLEDYKARGTQAAPYYTVSF 500
            LYHLLEHRA ECRYFVIPLWRGSGYTTMF+QVQ  HM+FTGLEDYKARGTQAAPY+TVSF
Sbjct: 106  LYHLLEHRASECRYFVIPLWRGSGYTTMFIQVQTQHMVFTGLEDYKARGTQAAPYFTVSF 165

Query: 499  YTEFAETKDLVLIRGDVVFTSKLTDSEAKWLLETAQSFYLNDVRYRLVERFNKETRDFEF 320
            YTEFAE+KDLVLIRGDVVFTSKLTDSEAKWLLE AQSFYLND RY+LVERFN++T DFEF
Sbjct: 166  YTEFAESKDLVLIRGDVVFTSKLTDSEAKWLLEAAQSFYLNDARYKLVERFNRQTHDFEF 225

Query: 319  KDVLQALDMPIL 284
            KDVLQ LDMPIL
Sbjct: 226  KDVLQVLDMPIL 237


>ref|XP_004134937.1| PREDICTED: uncharacterized protein LOC101220963 [Cucumis sativus]
            gi|449479251|ref|XP_004155549.1| PREDICTED:
            uncharacterized protein LOC101229737 [Cucumis sativus]
          Length = 248

 Score =  369 bits (946), Expect = 1e-99
 Identities = 178/246 (72%), Positives = 205/246 (83%), Gaps = 1/246 (0%)
 Frame = -3

Query: 1018 SSTSKIWRSIASKARNLFLFNDPGARSFS-AVSVGVTAQKLHQPGIPCDFLKWGSLGFCR 842
            SS+ +  R+IA   + +   + P  R  S +     +  KL +   P DFLKW SLGF R
Sbjct: 3    SSSLQTLRTIAGSVKTVIASSSPVVRQSSRSYFANPSLGKLQKETNPSDFLKWSSLGFFR 62

Query: 841  TSRFATGFNPLQRKPLDSIVDVERLKDRYPDDITSIWDDYHIGRGHVGASMKAKLYHLLE 662
            TS+FATGFNPLQ KPLDSI+D+ER KDR P+D+ SIWDDYH+GRGH+G SMKAKLYHLLE
Sbjct: 63   TSKFATGFNPLQPKPLDSIIDMERAKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHLLE 122

Query: 661  HRAKECRYFVIPLWRGSGYTTMFVQVQMPHMLFTGLEDYKARGTQAAPYYTVSFYTEFAE 482
             RA +CRYFVIPLWRGSGYTTMFVQVQ PH++FTGLEDYKARGTQAAPY+TVS+Y EFAE
Sbjct: 123  QRAADCRYFVIPLWRGSGYTTMFVQVQTPHIIFTGLEDYKARGTQAAPYFTVSYYKEFAE 182

Query: 481  TKDLVLIRGDVVFTSKLTDSEAKWLLETAQSFYLNDVRYRLVERFNKETRDFEFKDVLQA 302
            +KDLVLIRGD+VFTSKLTD EA+WLLET QSFYLNDVRY+LVERFN++TRDFEFKDVLQA
Sbjct: 183  SKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVLQA 242

Query: 301  LDMPIL 284
            LDMPIL
Sbjct: 243  LDMPIL 248


>ref|XP_002272818.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1
            [Vitis vinifera] gi|297740461|emb|CBI30643.3| unnamed
            protein product [Vitis vinifera]
          Length = 245

 Score =  369 bits (946), Expect = 1e-99
 Identities = 184/249 (73%), Positives = 207/249 (83%)
 Frame = -3

Query: 1030 MQRVSSTSKIWRSIASKARNLFLFNDPGARSFSAVSVGVTAQKLHQPGIPCDFLKWGSLG 851
            MQRVS   ++ R I S   +L L      +SF   SV    +KL Q GIP DF KWGSLG
Sbjct: 1    MQRVSG--RVSRIITSSVASL-LVRASSTQSFGTFSVKPNFRKLQQ-GIPGDFPKWGSLG 56

Query: 850  FCRTSRFATGFNPLQRKPLDSIVDVERLKDRYPDDITSIWDDYHIGRGHVGASMKAKLYH 671
            FCRT  FA+GF PLQ KPL SI+D+ER+KDR  +DI SIWDDYH+GRGH+ ASMK KLYH
Sbjct: 57   FCRTLGFASGFTPLQPKPLGSILDIERVKDRSSEDIASIWDDYHLGRGHIAASMKPKLYH 116

Query: 670  LLEHRAKECRYFVIPLWRGSGYTTMFVQVQMPHMLFTGLEDYKARGTQAAPYYTVSFYTE 491
            LLEHRA  CR+FVIPLWRGSGY TMF QVQM HM+FTGLEDYKARGTQAAPY+TV+FYT+
Sbjct: 117  LLEHRAANCRHFVIPLWRGSGYATMFAQVQMQHMIFTGLEDYKARGTQAAPYFTVTFYTD 176

Query: 490  FAETKDLVLIRGDVVFTSKLTDSEAKWLLETAQSFYLNDVRYRLVERFNKETRDFEFKDV 311
            FAE+KDLVLIRGD+VFTSKL+DSEAKWLLETAQSFYLNDVRY+LVERFNKETR+FEFKDV
Sbjct: 177  FAESKDLVLIRGDIVFTSKLSDSEAKWLLETAQSFYLNDVRYKLVERFNKETREFEFKDV 236

Query: 310  LQALDMPIL 284
            LQALDMP+L
Sbjct: 237  LQALDMPVL 245


>ref|XP_002305764.1| predicted protein [Populus trichocarpa] gi|222848728|gb|EEE86275.1|
            predicted protein [Populus trichocarpa]
          Length = 244

 Score =  353 bits (905), Expect = 7e-95
 Identities = 172/250 (68%), Positives = 204/250 (81%), Gaps = 1/250 (0%)
 Frame = -3

Query: 1030 MQRVSSTSKIWRSIASKARNLFLFNDPGARSFSAVSV-GVTAQKLHQPGIPCDFLKWGSL 854
            MQR+SS      S+++      L      RS +  S+     QK  +P IP  FLKWGSL
Sbjct: 1    MQRISSRLTRTSSLST------LLTQTIKRSSNTHSLKSANLQKQQEPAIPGHFLKWGSL 54

Query: 853  GFCRTSRFATGFNPLQRKPLDSIVDVERLKDRYPDDITSIWDDYHIGRGHVGASMKAKLY 674
            GF RTSRFATGF PL+ KPLDSI+D+ER K + P+D+ SIWDDYH+GRGH+GASMKAKLY
Sbjct: 55   GFVRTSRFATGFTPLEPKPLDSIMDIERAKTKSPEDLASIWDDYHLGRGHIGASMKAKLY 114

Query: 673  HLLEHRAKECRYFVIPLWRGSGYTTMFVQVQMPHMLFTGLEDYKARGTQAAPYYTVSFYT 494
             LL  RA +C+YFVIPLWRGSGYTTMF QVQMPHM+FTGLEDYK+RGTQA+PY TV FYT
Sbjct: 115  QLLVQRAADCKYFVIPLWRGSGYTTMFAQVQMPHMIFTGLEDYKSRGTQASPYLTVKFYT 174

Query: 493  EFAETKDLVLIRGDVVFTSKLTDSEAKWLLETAQSFYLNDVRYRLVERFNKETRDFEFKD 314
            EFAE+KDLVLIRGD+VFTSKLTD EA+W+LETAQSFYLNDVR++LVE+FNK+TRDFEFKD
Sbjct: 175  EFAESKDLVLIRGDIVFTSKLTDEEAEWILETAQSFYLNDVRFKLVEQFNKQTRDFEFKD 234

Query: 313  VLQALDMPIL 284
            VL++L+MPI+
Sbjct: 235  VLRSLNMPIM 244


Top