BLASTX nr result

ID: Glycyrrhiza23_contig00008407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008407
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ...   152   4e-72
gb|AFK41303.1| unknown [Medicago truncatula]                          150   2e-71
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin...   148   3e-71
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin...   148   3e-71
gb|AFK38034.1| unknown [Lotus japonicus]                              150   6e-70

>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|355511987|gb|AES93610.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 [Medicago truncatula]
          Length = 410

 Score =  152 bits (384), Expect(2) = 4e-72
 Identities = 75/76 (98%), Positives = 76/76 (100%)
 Frame = +1

Query: 337 LLVNIKEHVLVPEHQVLNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII 516
           LLVNIKEHVLVPEHQ+LNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII
Sbjct: 335 LLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII 394

Query: 517 RPSETAGRYVTYRFVV 564
           RPSETAGRYVTYRFVV
Sbjct: 395 RPSETAGRYVTYRFVV 410



 Score =  145 bits (366), Expect(2) = 4e-72
 Identities = 69/78 (88%), Positives = 74/78 (94%)
 Frame = +3

Query: 3   KHEFKSKYGEHMKREDLVINKTKKDNPSDQIYVFFPEEHKVGVKTMKTYTNRMNSENVYR 182
           KH+FK KYGE+MKREDLVINKTKKD PSDQIYVFFPEE KVGVKTMKTYTNRMNSENVYR
Sbjct: 242 KHDFKDKYGENMKREDLVINKTKKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYR 301

Query: 183 AILVLQTNLTPFARTCVA 236
           AILV QT+LTPFA+TCV+
Sbjct: 302 AILVCQTSLTPFAKTCVS 319


>gb|AFK41303.1| unknown [Medicago truncatula]
          Length = 206

 Score =  150 bits (378), Expect(2) = 2e-71
 Identities = 74/76 (97%), Positives = 75/76 (98%)
 Frame = +1

Query: 337 LLVNIKEHVLVPEHQVLNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII 516
           LLVNIKEHVLVPEHQ+LNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII
Sbjct: 131 LLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII 190

Query: 517 RPSETAGRYVTYRFVV 564
           RPSETAGRYVTYR VV
Sbjct: 191 RPSETAGRYVTYRLVV 206



 Score =  145 bits (366), Expect(2) = 2e-71
 Identities = 69/78 (88%), Positives = 74/78 (94%)
 Frame = +3

Query: 3   KHEFKSKYGEHMKREDLVINKTKKDNPSDQIYVFFPEEHKVGVKTMKTYTNRMNSENVYR 182
           KH+FK KYGE+MKREDLVINKTKKD PSDQIYVFFPEE KVGVKTMKTYTNRMNSENVYR
Sbjct: 38  KHDFKDKYGENMKREDLVINKTKKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYR 97

Query: 183 AILVLQTNLTPFARTCVA 236
           AILV QT+LTPFA+TCV+
Sbjct: 98  AILVCQTSLTPFAKTCVS 115


>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
           gi|255627545|gb|ACU14117.1| unknown [Glycine max]
          Length = 206

 Score =  148 bits (374), Expect(2) = 3e-71
 Identities = 70/78 (89%), Positives = 74/78 (94%)
 Frame = +3

Query: 3   KHEFKSKYGEHMKREDLVINKTKKDNPSDQIYVFFPEEHKVGVKTMKTYTNRMNSENVYR 182
           KHEFKSKYGEHMKREDLVINK+KKDN  DQIYVFFP+E KVGVKTMKTYTNRMNSENVYR
Sbjct: 38  KHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYR 97

Query: 183 AILVLQTNLTPFARTCVA 236
           AILV QTNLTPFARTC++
Sbjct: 98  AILVTQTNLTPFARTCIS 115



 Score =  146 bits (368), Expect(2) = 3e-71
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +1

Query: 337 LLVNIKEHVLVPEHQVLNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII 516
           LLVNIKEH LVPEHQVL D EKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII
Sbjct: 131 LLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII 190

Query: 517 RPSETAGRYVTYRFVV 564
           RPSETAGRYVTYRFVV
Sbjct: 191 RPSETAGRYVTYRFVV 206


>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
           gi|255625665|gb|ACU13177.1| unknown [Glycine max]
          Length = 206

 Score =  148 bits (374), Expect(2) = 3e-71
 Identities = 70/78 (89%), Positives = 74/78 (94%)
 Frame = +3

Query: 3   KHEFKSKYGEHMKREDLVINKTKKDNPSDQIYVFFPEEHKVGVKTMKTYTNRMNSENVYR 182
           KHEFKSKYGEHMKREDLVINK+KKDN  DQIYVFFP+E KVGVKTMKTYTNRMNSENVYR
Sbjct: 38  KHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYR 97

Query: 183 AILVLQTNLTPFARTCVA 236
           AILV QTNLTPFARTC++
Sbjct: 98  AILVTQTNLTPFARTCIS 115



 Score =  146 bits (368), Expect(2) = 3e-71
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +1

Query: 337 LLVNIKEHVLVPEHQVLNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII 516
           LLVNIKEH LVPEHQVL D EKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII
Sbjct: 131 LLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII 190

Query: 517 RPSETAGRYVTYRFVV 564
           RPSETAGRYVTYRFVV
Sbjct: 191 RPSETAGRYVTYRFVV 206


>gb|AFK38034.1| unknown [Lotus japonicus]
          Length = 206

 Score =  150 bits (378), Expect(2) = 6e-70
 Identities = 72/76 (94%), Positives = 76/76 (100%)
 Frame = +1

Query: 337 LLVNIKEHVLVPEHQVLNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII 516
           LLVNIKEHVLVPEHQ+LN+TEKKTLLERYTVKETQLPRIQ+TDPVARYYGLKRGQVVKII
Sbjct: 131 LLVNIKEHVLVPEHQILNETEKKTLLERYTVKETQLPRIQITDPVARYYGLKRGQVVKII 190

Query: 517 RPSETAGRYVTYRFVV 564
           RPSETAGRY+TYRFVV
Sbjct: 191 RPSETAGRYITYRFVV 206



 Score =  140 bits (353), Expect(2) = 6e-70
 Identities = 64/78 (82%), Positives = 74/78 (94%)
 Frame = +3

Query: 3   KHEFKSKYGEHMKREDLVINKTKKDNPSDQIYVFFPEEHKVGVKTMKTYTNRMNSENVYR 182
           +HEFK+KYG++MKREDL INKTKKD PSDQIYVFFP+E KVGVKTMKTYTNRMNSENV+R
Sbjct: 38  RHEFKTKYGDNMKREDLTINKTKKDGPSDQIYVFFPDEPKVGVKTMKTYTNRMNSENVFR 97

Query: 183 AILVLQTNLTPFARTCVA 236
           AILV Q+NLTPFA+TC++
Sbjct: 98  AILVCQSNLTPFAKTCIS 115


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