BLASTX nr result

ID: Glycyrrhiza23_contig00008358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008358
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chlorop...   379   e-103
gb|AFK43716.1| unknown [Medicago truncatula]                          379   e-103
ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chlorop...   374   e-101
gb|ACU23468.1| unknown [Glycine max]                                  370   e-100
ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chlorop...   369   e-100

>ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1
           [Glycine max]
          Length = 226

 Score =  379 bits (974), Expect = e-103
 Identities = 184/217 (84%), Positives = 205/217 (94%)
 Frame = +2

Query: 131 MASSVTSSFQISNFKSVFLGERSKLGVPSVPTAHVGFLRKTTECKESRIGKQPVVIPSNV 310
           MASSVTSSF+ISN KSVF+GE +KL V SVP AHVGF RKT ECKESRIGKQP+ +PSNV
Sbjct: 1   MASSVTSSFRISNLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNV 60

Query: 311 TIKLEGQDIQVKGPLGELSLTYPREVKVERQETGTLRVSKAVETRRANQMHGLFRTLTDN 490
           T+KLEGQDIQVKGPLGEL+LTYPREV VER+E+GTLRV KAVETRRANQMHGLFRTLTDN
Sbjct: 61  TVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDN 120

Query: 491 LVVGVSKGFEKKLELIGVGYRATVEGNEVVLNLGFSHPVRMPIPEGLKVKVEENTKITIS 670
           LV+GVSKGF+KKL+L+GVGYRA VEGNEVVLNLGFSHPV+M IP+GLKVKVEENT+IT+S
Sbjct: 121 LVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVS 180

Query: 671 GYDKSDIGQFAASIRKWRPPEPYKGKGIKYADEVVRR 781
           GYDKS++GQFAASIRKWRPPEPYKGKG+KYADE+VRR
Sbjct: 181 GYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIVRR 217


>gb|AFK43716.1| unknown [Medicago truncatula]
          Length = 226

 Score =  379 bits (972), Expect = e-103
 Identities = 185/217 (85%), Positives = 201/217 (92%)
 Frame = +2

Query: 131 MASSVTSSFQISNFKSVFLGERSKLGVPSVPTAHVGFLRKTTECKESRIGKQPVVIPSNV 310
           MASSVTSSFQ+SNFKS F+GERS++ + S P  HVGF RKTTECKESRIGKQP+ +PSNV
Sbjct: 1   MASSVTSSFQLSNFKSSFVGERSRIRISSAPATHVGFFRKTTECKESRIGKQPIPVPSNV 60

Query: 311 TIKLEGQDIQVKGPLGELSLTYPREVKVERQETGTLRVSKAVETRRANQMHGLFRTLTDN 490
           TIK+EGQ    KGPLGELSLTYPREVKVERQE G L+VSKAVETRRANQMHGLFRTLTDN
Sbjct: 61  TIKMEGQYFHAKGPLGELSLTYPREVKVERQEEGVLKVSKAVETRRANQMHGLFRTLTDN 120

Query: 491 LVVGVSKGFEKKLELIGVGYRATVEGNEVVLNLGFSHPVRMPIPEGLKVKVEENTKITIS 670
           +VVGVSKGFEKKL+LIGVGYRATVEGNEVVLNLGFSHPV+M IPEGLKVKV+ENT+IT+S
Sbjct: 121 IVVGVSKGFEKKLQLIGVGYRATVEGNEVVLNLGFSHPVKMTIPEGLKVKVDENTRITVS 180

Query: 671 GYDKSDIGQFAASIRKWRPPEPYKGKGIKYADEVVRR 781
           GYDKS+IGQFAASIRKWRPPEPYKGKGIKY DEVVRR
Sbjct: 181 GYDKSEIGQFAASIRKWRPPEPYKGKGIKYEDEVVRR 217


>ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Glycine
           max]
          Length = 226

 Score =  374 bits (961), Expect = e-101
 Identities = 181/217 (83%), Positives = 203/217 (93%)
 Frame = +2

Query: 131 MASSVTSSFQISNFKSVFLGERSKLGVPSVPTAHVGFLRKTTECKESRIGKQPVVIPSNV 310
           M SSVTSSF+ISN  SVF+GE +K  V +VP AHVGF+RKT ECKESRIGKQP+ +PSNV
Sbjct: 1   MTSSVTSSFRISNLNSVFVGETNKFRVSTVPGAHVGFIRKTVECKESRIGKQPIPVPSNV 60

Query: 311 TIKLEGQDIQVKGPLGELSLTYPREVKVERQETGTLRVSKAVETRRANQMHGLFRTLTDN 490
           T+KLEGQDIQVKGPLGEL+L+YPREV VER+E+GTLRV KAVETRRANQMHGLFRTLTDN
Sbjct: 61  TVKLEGQDIQVKGPLGELALSYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDN 120

Query: 491 LVVGVSKGFEKKLELIGVGYRATVEGNEVVLNLGFSHPVRMPIPEGLKVKVEENTKITIS 670
           LV+GVSKGFEKKL+L+GVGYRA VEGNEVVLNLGFSHPV+M IP+GLKVKVEENT+IT+S
Sbjct: 121 LVIGVSKGFEKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMIIPDGLKVKVEENTRITVS 180

Query: 671 GYDKSDIGQFAASIRKWRPPEPYKGKGIKYADEVVRR 781
           GYDKS++GQFAASIRKWRPPEPYKGKG+KYADEVVRR
Sbjct: 181 GYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEVVRR 217


>gb|ACU23468.1| unknown [Glycine max]
          Length = 226

 Score =  370 bits (949), Expect = e-100
 Identities = 180/217 (82%), Positives = 202/217 (93%)
 Frame = +2

Query: 131 MASSVTSSFQISNFKSVFLGERSKLGVPSVPTAHVGFLRKTTECKESRIGKQPVVIPSNV 310
           MASSVTSSF+ISN KSVF+GE +KL V SVP AHVGF RKT ECKESRIGKQP+ +PSNV
Sbjct: 1   MASSVTSSFRISNLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNV 60

Query: 311 TIKLEGQDIQVKGPLGELSLTYPREVKVERQETGTLRVSKAVETRRANQMHGLFRTLTDN 490
           T+KLEGQDIQVKGPLGEL+LTYPREV VER+E+GTLRV KAVETRRANQMHGLFRTLTDN
Sbjct: 61  TVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDN 120

Query: 491 LVVGVSKGFEKKLELIGVGYRATVEGNEVVLNLGFSHPVRMPIPEGLKVKVEENTKITIS 670
           LV+GVSKGF+KKL+L+GVGYRA VEGNEVVLNLGFSHPV+M IP+GLKVKVEE+T+IT+S
Sbjct: 121 LVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEEDTRITVS 180

Query: 671 GYDKSDIGQFAASIRKWRPPEPYKGKGIKYADEVVRR 781
           GYDK ++GQFAASI KWRPPEPY GKG+KYADE+VRR
Sbjct: 181 GYDKFEVGQFAASIMKWRPPEPYIGKGVKYADEIVRR 217


>ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 2
           [Glycine max]
          Length = 223

 Score =  369 bits (947), Expect = e-100
 Identities = 181/217 (83%), Positives = 203/217 (93%)
 Frame = +2

Query: 131 MASSVTSSFQISNFKSVFLGERSKLGVPSVPTAHVGFLRKTTECKESRIGKQPVVIPSNV 310
           MASSVTSSF+I   +SVF+GE +KL V SVP AHVGF RKT ECKESRIGKQP+ +PSNV
Sbjct: 1   MASSVTSSFRI---RSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNV 57

Query: 311 TIKLEGQDIQVKGPLGELSLTYPREVKVERQETGTLRVSKAVETRRANQMHGLFRTLTDN 490
           T+KLEGQDIQVKGPLGEL+LTYPREV VER+E+GTLRV KAVETRRANQMHGLFRTLTDN
Sbjct: 58  TVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDN 117

Query: 491 LVVGVSKGFEKKLELIGVGYRATVEGNEVVLNLGFSHPVRMPIPEGLKVKVEENTKITIS 670
           LV+GVSKGF+KKL+L+GVGYRA VEGNEVVLNLGFSHPV+M IP+GLKVKVEENT+IT+S
Sbjct: 118 LVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVS 177

Query: 671 GYDKSDIGQFAASIRKWRPPEPYKGKGIKYADEVVRR 781
           GYDKS++GQFAASIRKWRPPEPYKGKG+KYADE+VRR
Sbjct: 178 GYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIVRR 214


Top