BLASTX nr result

ID: Glycyrrhiza23_contig00008345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008345
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237307.1| uncharacterized protein LOC100500390 [Glycin...   219   6e-55
sp|P11894.2|RK9_PEA RecName: Full=50S ribosomal protein L9, chlo...   214   4e-53
ref|NP_001235742.1| uncharacterized protein LOC100500279 [Glycin...   213   6e-53
ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|1...   204   4e-50
ref|XP_003606325.1| 50S ribosomal protein L9 [Medicago truncatul...   202   8e-50

>ref|NP_001237307.1| uncharacterized protein LOC100500390 [Glycine max]
           gi|255630210|gb|ACU15460.1| unknown [Glycine max]
          Length = 197

 Score =  219 bits (559), Expect = 6e-55
 Identities = 120/168 (71%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
 Frame = +3

Query: 144 FTGNSKGS-SQFPNKSAGLLVFAQXXXXXXXXXXXXEDVVDVGKKGQLLDVKAGFFRNFL 320
           FTGNSK   +QFPNKSA   VFAQ            EDV DVGK+GQLLDV+AGFFRN+L
Sbjct: 20  FTGNSKAPITQFPNKSARFSVFAQKKAKKLRKIILKEDVTDVGKQGQLLDVRAGFFRNYL 79

Query: 321 LPNGKAQIVTPLLLKXXXXXXXXXXXXXXXXXXXXQQLALIFETVGAFKVKRKGGKGKQI 500
           LP GKAQ+VTP LLK                    QQLALIFETVGAFKVKRKGGKG QI
Sbjct: 80  LPMGKAQLVTPQLLKEMKIEEERIEAEKRRVKEEAQQLALIFETVGAFKVKRKGGKGNQI 139

Query: 501 FGSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAEIKLHPEVT 644
           FGSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAE+KLHPEVT
Sbjct: 140 FGSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAELKLHPEVT 187


>sp|P11894.2|RK9_PEA RecName: Full=50S ribosomal protein L9, chloroplastic; AltName:
           Full=CL9; Flags: Precursor gi|20881|emb|CAA32184.1|
           unnamed protein product [Pisum sativum]
          Length = 194

 Score =  214 bits (544), Expect = 4e-53
 Identities = 112/167 (67%), Positives = 124/167 (74%)
 Frame = +3

Query: 144 FTGNSKGSSQFPNKSAGLLVFAQXXXXXXXXXXXXEDVVDVGKKGQLLDVKAGFFRNFLL 323
           F  N K  SQFPNKS+G +VFAQ            ED+V+VGKKG+LLDV+ GFFRNFL 
Sbjct: 18  FAANLKTCSQFPNKSSGFMVFAQKKTKKTRKIILKEDIVNVGKKGELLDVRVGFFRNFLF 77

Query: 324 PNGKAQIVTPLLLKXXXXXXXXXXXXXXXXXXXXQQLALIFETVGAFKVKRKGGKGKQIF 503
           P+GKAQ+VTP +LK                    QQLAL FET GAFKVKRKGGKGKQIF
Sbjct: 78  PSGKAQLVTPGVLKEMKIEEERIEAEKRRVLEEAQQLALFFETFGAFKVKRKGGKGKQIF 137

Query: 504 GSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAEIKLHPEVT 644
           GSVTAQDLVDIIKAQLQREVDKRIV+LPEIRETGEYIAE+KLHP+VT
Sbjct: 138 GSVTAQDLVDIIKAQLQREVDKRIVNLPEIRETGEYIAELKLHPDVT 184


>ref|NP_001235742.1| uncharacterized protein LOC100500279 [Glycine max]
           gi|255629919|gb|ACU15311.1| unknown [Glycine max]
          Length = 198

 Score =  213 bits (542), Expect = 6e-53
 Identities = 118/169 (69%), Positives = 125/169 (73%), Gaps = 2/169 (1%)
 Frame = +3

Query: 144 FTGNSKG--SSQFPNKSAGLLVFAQXXXXXXXXXXXXEDVVDVGKKGQLLDVKAGFFRNF 317
           FTGNSK   ++QFPNK+    VFAQ            EDV  VGK+GQLLDVKAGFFRN+
Sbjct: 20  FTGNSKAPPTTQFPNKNVRFSVFAQKKAKKLRKIILKEDVAYVGKQGQLLDVKAGFFRNY 79

Query: 318 LLPNGKAQIVTPLLLKXXXXXXXXXXXXXXXXXXXXQQLALIFETVGAFKVKRKGGKGKQ 497
           LLP GKAQ+VT  LLK                    QQLALIFETVGAFKVKRKGGKGKQ
Sbjct: 80  LLPMGKAQLVTLQLLKEMKIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQ 139

Query: 498 IFGSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAEIKLHPEVT 644
           IFGSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAE+KLHPEVT
Sbjct: 140 IFGSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAELKLHPEVT 188


>ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|118488503|gb|ABK96065.1|
           unknown [Populus trichocarpa]
           gi|222873559|gb|EEF10690.1| predicted protein [Populus
           trichocarpa]
          Length = 198

 Score =  204 bits (518), Expect = 4e-50
 Identities = 108/167 (64%), Positives = 122/167 (73%)
 Frame = +3

Query: 144 FTGNSKGSSQFPNKSAGLLVFAQXXXXXXXXXXXXEDVVDVGKKGQLLDVKAGFFRNFLL 323
           F G +   S+FP+K   +LV AQ            EDV D+GKKGQL+DVKAGF+RNFLL
Sbjct: 22  FVGPTNEISKFPDKRIPMLVLAQKKAKKTRKIILKEDVTDLGKKGQLVDVKAGFYRNFLL 81

Query: 324 PNGKAQIVTPLLLKXXXXXXXXXXXXXXXXXXXXQQLALIFETVGAFKVKRKGGKGKQIF 503
           P GKAQIVTP L+K                    QQLALIFETVGAFKVKRKGGKG+QIF
Sbjct: 82  PTGKAQIVTPGLVKEMRMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGRQIF 141

Query: 504 GSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAEIKLHPEVT 644
           G+VTAQDLVDIIKAQ+QR+VDKRIV LP+IRETGEYIAE+KLHPEVT
Sbjct: 142 GTVTAQDLVDIIKAQIQRDVDKRIVSLPDIRETGEYIAELKLHPEVT 188


>ref|XP_003606325.1| 50S ribosomal protein L9 [Medicago truncatula]
           gi|217069924|gb|ACJ83322.1| unknown [Medicago
           truncatula] gi|355507380|gb|AES88522.1| 50S ribosomal
           protein L9 [Medicago truncatula]
           gi|388495282|gb|AFK35707.1| unknown [Medicago
           truncatula]
          Length = 192

 Score =  202 bits (515), Expect = 8e-50
 Identities = 109/167 (65%), Positives = 121/167 (72%)
 Frame = +3

Query: 144 FTGNSKGSSQFPNKSAGLLVFAQXXXXXXXXXXXXEDVVDVGKKGQLLDVKAGFFRNFLL 323
           FT N   SSQF NK++  L+FAQ            ED+++VGKKG+LLDVKAGFFRN+L 
Sbjct: 16  FTSNLNTSSQFSNKTSRFLIFAQKKAKKTRKIILKEDILNVGKKGELLDVKAGFFRNYLF 75

Query: 324 PNGKAQIVTPLLLKXXXXXXXXXXXXXXXXXXXXQQLALIFETVGAFKVKRKGGKGKQIF 503
           P+GKAQI T  LLK                     QLA I E+VGAFKVKRKGGKGKQIF
Sbjct: 76  PSGKAQIATADLLKELKIEEERIEAEKQRVKEEALQLAQILESVGAFKVKRKGGKGKQIF 135

Query: 504 GSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAEIKLHPEVT 644
           GSVTAQDLVDIIKAQLQREVDKRIV+LPEIRETGEYIAE+KLHPEVT
Sbjct: 136 GSVTAQDLVDIIKAQLQREVDKRIVELPEIRETGEYIAELKLHPEVT 182


Top