BLASTX nr result

ID: Glycyrrhiza23_contig00008324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008324
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543006.1| PREDICTED: THO complex subunit 7 homolog [Gl...   408   e-111
ref|XP_003593729.1| THO complex subunit-like protein [Medicago t...   397   e-108
gb|ABK96424.1| unknown [Populus trichocarpa x Populus deltoides]      370   e-100
ref|XP_002520058.1| conserved hypothetical protein [Ricinus comm...   367   3e-99
ref|XP_002319257.1| predicted protein [Populus trichocarpa] gi|2...   366   5e-99

>ref|XP_003543006.1| PREDICTED: THO complex subunit 7 homolog [Glycine max]
          Length = 242

 Score =  408 bits (1049), Expect = e-111
 Identities = 209/242 (86%), Positives = 224/242 (92%)
 Frame = +3

Query: 69  MLGKTRKVSGRGEAVAANYAFGPSEDDVIIKHXXXXXXXXXXGEPPLKKLQKKFTSFVSE 248
           MLGKTRKVS RGE+VAANYAFGPSEDDVIIKH          G+PPLKKLQKKFTSFVSE
Sbjct: 1   MLGKTRKVSARGESVAANYAFGPSEDDVIIKHRLLTRTTTTRGDPPLKKLQKKFTSFVSE 60

Query: 249 VGKEEDNNYNDCEKLARAFLQELTTFEIPLLKSKAIVEANVREKDNFNELKGEMNRQILQ 428
           V K+EDNNYN+C+KLARAFLQELTTFEIPLLKSKAIVEAN+REK+NFNELK EMNRQILQ
Sbjct: 61  VDKDEDNNYNECDKLARAFLQELTTFEIPLLKSKAIVEANIREKENFNELKEEMNRQILQ 120

Query: 429 AQADIEDLKKQLEESKVERRHKEECEAIRKLIAQQPPRSETQKLITDLEKEIAALDAENT 608
           AQ DIEDLKKQLEESKVERRHKEECEAIRKLIA QPPRSET K+I++LE EIAALDAENT
Sbjct: 121 AQDDIEDLKKQLEESKVERRHKEECEAIRKLIAMQPPRSETMKVISELENEIAALDAENT 180

Query: 609 AGSRLLELRKKQFALLLHVVDELQNTIEEEQKSLVEEMRIASEELKNGLEDASGGSEAMA 788
           AGSRLLELRKKQFALLLHVVDELQNTIEEEQKSLVEEMR+A+EELKNG+ED +GG+EAMA
Sbjct: 181 AGSRLLELRKKQFALLLHVVDELQNTIEEEQKSLVEEMRMATEELKNGMEDTNGGAEAMA 240

Query: 789 ID 794
           ID
Sbjct: 241 ID 242


>ref|XP_003593729.1| THO complex subunit-like protein [Medicago truncatula]
           gi|355482777|gb|AES63980.1| THO complex subunit-like
           protein [Medicago truncatula]
           gi|388493192|gb|AFK34662.1| unknown [Medicago
           truncatula]
          Length = 242

 Score =  397 bits (1019), Expect = e-108
 Identities = 207/242 (85%), Positives = 220/242 (90%)
 Frame = +3

Query: 69  MLGKTRKVSGRGEAVAANYAFGPSEDDVIIKHXXXXXXXXXXGEPPLKKLQKKFTSFVSE 248
           M G+ RKVS RGE VAANYAFGPS DDVIIKH          GEPPLKKLQKKFTSFVSE
Sbjct: 1   MQGRVRKVSARGEPVAANYAFGPSIDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVSE 60

Query: 249 VGKEEDNNYNDCEKLARAFLQELTTFEIPLLKSKAIVEANVREKDNFNELKGEMNRQILQ 428
           V K+EDN YNDCEKLARAFLQELTTFEIPLLKSKAIVEANVREKDNFNELK EMNRQI Q
Sbjct: 61  VDKDEDN-YNDCEKLARAFLQELTTFEIPLLKSKAIVEANVREKDNFNELKDEMNRQIAQ 119

Query: 429 AQADIEDLKKQLEESKVERRHKEECEAIRKLIAQQPPRSETQKLITDLEKEIAALDAENT 608
           AQ DIEDLKKQLEESKVERRHKEECEAIRKLIA QPPRSETQK++++LEKEIAALDAENT
Sbjct: 120 AQVDIEDLKKQLEESKVERRHKEECEAIRKLIAVQPPRSETQKVLSELEKEIAALDAENT 179

Query: 609 AGSRLLELRKKQFALLLHVVDELQNTIEEEQKSLVEEMRIASEELKNGLEDASGGSEAMA 788
           AGSRLLELRKKQF+LLL VVDELQNTIEE+QKSLVEEMR+A+EELKNG+EDASGGS+AMA
Sbjct: 180 AGSRLLELRKKQFSLLLQVVDELQNTIEEDQKSLVEEMRLATEELKNGMEDASGGSDAMA 239

Query: 789 ID 794
           +D
Sbjct: 240 VD 241


>gb|ABK96424.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 240

 Score =  370 bits (949), Expect = e-100
 Identities = 187/239 (78%), Positives = 213/239 (89%)
 Frame = +3

Query: 78  KTRKVSGRGEAVAANYAFGPSEDDVIIKHXXXXXXXXXXGEPPLKKLQKKFTSFVSEVGK 257
           K RK+SGRGE VAANYAFGP EDDVIIKH          GEPPLKKLQKKF S+VSE+ K
Sbjct: 3   KGRKISGRGETVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFASYVSEIEK 62

Query: 258 EEDNNYNDCEKLARAFLQELTTFEIPLLKSKAIVEANVREKDNFNELKGEMNRQILQAQA 437
           +EDN YNDC KL++AFLQEL+TFEIPLLKSKA++++NVREK+NFNELK ++NRQILQAQA
Sbjct: 63  DEDN-YNDCVKLSKAFLQELSTFEIPLLKSKAVIDSNVREKENFNELKDDINRQILQAQA 121

Query: 438 DIEDLKKQLEESKVERRHKEECEAIRKLIAQQPPRSETQKLITDLEKEIAALDAENTAGS 617
           DIEDLKKQLEESK+ER+HKEECEAIRKLIA QPPRS  QK+ITDLEKEIAAL+AENTA S
Sbjct: 122 DIEDLKKQLEESKIERQHKEECEAIRKLIATQPPRSLMQKVITDLEKEIAALEAENTASS 181

Query: 618 RLLELRKKQFALLLHVVDELQNTIEEEQKSLVEEMRIASEELKNGLEDASGGSEAMAID 794
           RLLELRKKQF LLLHVVDELQNTIEE++K+L+EEMR+A+EE KNG+EDA G SEAMA+D
Sbjct: 182 RLLELRKKQFVLLLHVVDELQNTIEEDEKNLIEEMRVATEEQKNGMEDAGGVSEAMAVD 240


>ref|XP_002520058.1| conserved hypothetical protein [Ricinus communis]
           gi|223540822|gb|EEF42382.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 242

 Score =  367 bits (942), Expect = 3e-99
 Identities = 183/240 (76%), Positives = 211/240 (87%)
 Frame = +3

Query: 78  KTRKVSGRGEAVAANYAFGPSEDDVIIKHXXXXXXXXXXGEPPLKKLQKKFTSFVSEVGK 257
           K RK+SGRGE VAANYAFGP EDD++IKH          GEPPLKKLQKKFTSFV EV K
Sbjct: 3   KGRKISGRGETVAANYAFGPLEDDIVIKHRLLTRTTTTRGEPPLKKLQKKFTSFVVEVEK 62

Query: 258 EEDNNYNDCEKLARAFLQELTTFEIPLLKSKAIVEANVREKDNFNELKGEMNRQILQAQA 437
            +++NYNDC +L++AFLQEL+TFEIPLLKSKA+++AN+REK+NF EL  E+ RQI QAQ 
Sbjct: 63  NDEDNYNDCVRLSKAFLQELSTFEIPLLKSKAVIDANLREKENFTELIDEITRQISQAQD 122

Query: 438 DIEDLKKQLEESKVERRHKEECEAIRKLIAQQPPRSETQKLITDLEKEIAALDAENTAGS 617
           DIEDLKKQLEESK+ER+HKEECEAIRKLIA QPPRSETQKLI DLEKEIA L+AEN AGS
Sbjct: 123 DIEDLKKQLEESKIERQHKEECEAIRKLIAMQPPRSETQKLIEDLEKEIAGLEAENIAGS 182

Query: 618 RLLELRKKQFALLLHVVDELQNTIEEEQKSLVEEMRIASEELKNGLEDASGGSEAMAIDQ 797
           RLLELRKKQFALLLHVVDELQN+IEE+QK+L+EEMR+A+E+ KNG+EDA GGSEAMA+DQ
Sbjct: 183 RLLELRKKQFALLLHVVDELQNSIEEDQKNLIEEMRMATEDQKNGMEDADGGSEAMAVDQ 242


>ref|XP_002319257.1| predicted protein [Populus trichocarpa] gi|222857633|gb|EEE95180.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  366 bits (940), Expect = 5e-99
 Identities = 185/239 (77%), Positives = 212/239 (88%)
 Frame = +3

Query: 78  KTRKVSGRGEAVAANYAFGPSEDDVIIKHXXXXXXXXXXGEPPLKKLQKKFTSFVSEVGK 257
           K RK+SGRGE VAANYAFGP EDDVIIKH          GEPPLKKLQKKF S+VSE+ K
Sbjct: 3   KGRKISGRGETVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFASYVSEIEK 62

Query: 258 EEDNNYNDCEKLARAFLQELTTFEIPLLKSKAIVEANVREKDNFNELKGEMNRQILQAQA 437
           +EDN Y+DC KL++AFLQEL+TFEIPLLKSKA++++NVREK+NFNELK ++NRQILQAQA
Sbjct: 63  DEDN-YHDCVKLSKAFLQELSTFEIPLLKSKAVIDSNVREKENFNELKDDINRQILQAQA 121

Query: 438 DIEDLKKQLEESKVERRHKEECEAIRKLIAQQPPRSETQKLITDLEKEIAALDAENTAGS 617
           DIEDLKKQLEESK+ER+HKEECEAIRKLIA QPPRS  QK+ITDLEKEIAAL+AENTA S
Sbjct: 122 DIEDLKKQLEESKIERQHKEECEAIRKLIATQPPRSLMQKVITDLEKEIAALEAENTASS 181

Query: 618 RLLELRKKQFALLLHVVDELQNTIEEEQKSLVEEMRIASEELKNGLEDASGGSEAMAID 794
           RLLELRKKQF LLLHVVDELQNTIEE++K+L+EEMR+A+EE KNG+ED  G SEAMA+D
Sbjct: 182 RLLELRKKQFVLLLHVVDELQNTIEEDEKNLIEEMRVATEEQKNGMEDTGGVSEAMAVD 240


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