BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008317
         (2416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...   484   e-134
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...   470   e-130
ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containi...   463   e-128
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|2...   460   e-127
ref|XP_003615448.1| Pentatricopeptide repeat-containing protein ...   444   e-122

>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
            [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
            protein product [Vitis vinifera]
          Length = 423

 Score =  484 bits (1245), Expect = e-134
 Identities = 243/358 (67%), Positives = 282/358 (78%), Gaps = 8/358 (2%)
 Frame = -3

Query: 1967 SRKRMSHQVDDHL--------PPKQSTLPALMLYYAENGLFHQAQTTWEQLLNSSFVPSV 1812
            SRKR+ H   + L         P  STL ALML YA+NGLF +AQ  W++++NSSF P++
Sbjct: 66   SRKRLPHVAQELLFEMKSEGFLPNNSTLSALMLCYADNGLFPKAQALWDEIINSSFGPNI 125

Query: 1811 RFISKLFDAYGKQGKFDEVMNVLHCVSLRNFSTLPDVYSLAISCFGRGGQLELMEETTRE 1632
            + +SKL DAYGK G F EV  +LH VS R+F+ + +VYSLAISCFG+GGQLE+ME   +E
Sbjct: 126  QIVSKLIDAYGKMGHFGEVTRILHQVSSRDFNFMHEVYSLAISCFGKGGQLEMMENALKE 185

Query: 1631 MVSRGFHMDSKTGNAFLFYYSIFGSLKEMENAYGRFQRSRFLIEKEVIRAMASAYVKERK 1452
            MVSRGF +DS TGNAF+ YYSIFGSL EME AY R ++SR LIE+E IRAM+ AY+KE+K
Sbjct: 186  MVSRGFPVDSATGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMSFAYIKEKK 245

Query: 1451 FYELGEFLRGVGLGRKNVGXXXXXXXXLSYAANFKMKSLQREFLRMVESGFRPDVTTFNI 1272
            +Y LG+FLR VGLGRKNVG        LSYAANFKMKSLQREFL MVE+GF PD+TTFNI
Sbjct: 246  YYRLGQFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLEMVEAGFAPDLTTFNI 305

Query: 1271 RALAFSRMSLFWDLHLSIEHMRHERVIPDLVTYGCVVDAYLDRRLGRNLDFVLNKMNVDD 1092
            RALAFSRMSLFWDLHLS+EHM+H +V+ DLVTYGCVVDAYLDRRLG+NLDF L KMN+DD
Sbjct: 306  RALAFSRMSLFWDLHLSLEHMQHVKVVADLVTYGCVVDAYLDRRLGKNLDFALKKMNMDD 365

Query: 1091 SSLLLTDPFVFEVLGKGDFHMSSEAFLEYNTQQKWTYRVLIQKYLKKHYRRNQIFWNY 918
            S L+ TD FVFEVLGKGDFH SSEAFLE     KWTYR LI  YLKK YR NQIFWNY
Sbjct: 366  SPLVSTDHFVFEVLGKGDFHSSSEAFLESKRNGKWTYRKLIATYLKKKYRSNQIFWNY 423


>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score =  470 bits (1209), Expect = e-130
 Identities = 231/361 (63%), Positives = 281/361 (77%), Gaps = 8/361 (2%)
 Frame = -3

Query: 1976 RNSSRKRMSHQVDDHLPPKQS--------TLPALMLYYAENGLFHQAQTTWEQLLNSSFV 1821
            +N   KR  H   + L   +S        TL A++L YA+NGL  QAQ  W+ +LN SF 
Sbjct: 67   QNLHSKRTPHLAQEILLEMKSQGYVLNNPTLSAILLCYADNGLLPQAQAIWKHMLNGSFT 126

Query: 1820 PSVRFISKLFDAYGKQGKFDEVMNVLHCVSLRNFSTLPDVYSLAISCFGRGGQLELMEET 1641
            PS++ +S+L DAY K+G F+EVMN+L  +S  NFS L + YSLAISCFG+GGQL+LME  
Sbjct: 127  PSIQIVSRLIDAYSKKGHFNEVMNILDQLSYSNFSLLHEAYSLAISCFGKGGQLQLMENA 186

Query: 1640 TREMVSRGFHMDSKTGNAFLFYYSIFGSLKEMENAYGRFQRSRFLIEKEVIRAMASAYVK 1461
             ++MV RGF +D  TGNAF+ YYSI GSL +ME+AY R +RSR L+++E IRA++ AYVK
Sbjct: 187  LKDMVLRGFPVDYATGNAFIRYYSIHGSLTDMESAYSRLKRSRHLVDREGIRAVSLAYVK 246

Query: 1460 ERKFYELGEFLRGVGLGRKNVGXXXXXXXXLSYAANFKMKSLQREFLRMVESGFRPDVTT 1281
            ERKFY LGEFLR VGLGRK+VG        LS+AANFKMKSLQREFLRM+E+GF PDVTT
Sbjct: 247  ERKFYRLGEFLRDVGLGRKDVGNLIWNFLLLSFAANFKMKSLQREFLRMLEAGFHPDVTT 306

Query: 1280 FNIRALAFSRMSLFWDLHLSIEHMRHERVIPDLVTYGCVVDAYLDRRLGRNLDFVLNKMN 1101
            FNIRALAFSRMSL WDLHL++EHM+HE+V PD+VTYGC+VDAYLDRRLG+NLDF + KMN
Sbjct: 307  FNIRALAFSRMSLLWDLHLTLEHMKHEKVSPDIVTYGCIVDAYLDRRLGKNLDFAIKKMN 366

Query: 1100 VDDSSLLLTDPFVFEVLGKGDFHMSSEAFLEYNTQQKWTYRVLIQKYLKKHYRRNQIFWN 921
            +D S +LLTDPFVFEVLGKGDFH S+EAFLE+  Q+KWTYR L+  YL+K YR NQIFWN
Sbjct: 367  LDGSPVLLTDPFVFEVLGKGDFHSSAEAFLEFKRQRKWTYRELVSIYLRKQYRSNQIFWN 426

Query: 920  Y 918
            Y
Sbjct: 427  Y 427


>ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like
            [Cucumis sativus] gi|449507537|ref|XP_004163059.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At3g42630-like [Cucumis sativus]
          Length = 388

 Score =  463 bits (1192), Expect = e-128
 Identities = 228/337 (67%), Positives = 268/337 (79%)
 Frame = -3

Query: 1928 PPKQSTLPALMLYYAENGLFHQAQTTWEQLLNSSFVPSVRFISKLFDAYGKQGKFDEVMN 1749
            P   STL  +M++Y ++G   QAQ  WE++LNS F PSV+ ISKLF+AYGK G FD +  
Sbjct: 52   PLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISKLFNAYGKMGHFDYITK 111

Query: 1748 VLHCVSLRNFSTLPDVYSLAISCFGRGGQLELMEETTREMVSRGFHMDSKTGNAFLFYYS 1569
            VL  V LR    LP+ YSLAISCFG+  QLELME T REMVS GF ++S TGN+F+ YYS
Sbjct: 112  VLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSSGFTVNSATGNSFIIYYS 171

Query: 1568 IFGSLKEMENAYGRFQRSRFLIEKEVIRAMASAYVKERKFYELGEFLRGVGLGRKNVGXX 1389
            +FGSL EME AYGR +RSRFLIEK+ I AMA AY+++RKFY LGEFLR VGLGRKNVG  
Sbjct: 172  MFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRDVGLGRKNVGNL 231

Query: 1388 XXXXXXLSYAANFKMKSLQREFLRMVESGFRPDVTTFNIRALAFSRMSLFWDLHLSIEHM 1209
                  LSYAANFKMKSLQREFL+MV++GF PD+TTFNIRALAFSRM L WDLHLS+EHM
Sbjct: 232  LWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALAFSRMDLLWDLHLSLEHM 291

Query: 1208 RHERVIPDLVTYGCVVDAYLDRRLGRNLDFVLNKMNVDDSSLLLTDPFVFEVLGKGDFHM 1029
            +H  + PDLVTYGCVVDAY+DRRLGRNL+F+L+KMN D   + LTD FVFE LGKGDFHM
Sbjct: 292  KHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQPPVSLTDSFVFEALGKGDFHM 351

Query: 1028 SSEAFLEYNTQQKWTYRVLIQKYLKKHYRRNQIFWNY 918
            SSEAF+++  Q+KWTYR LI  YLKKH+RRNQ+FWNY
Sbjct: 352  SSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 388


>ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|222873650|gb|EEF10781.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  460 bits (1184), Expect = e-127
 Identities = 238/384 (61%), Positives = 288/384 (75%), Gaps = 9/384 (2%)
 Frame = -3

Query: 2042 WRRNGKGYFGGATDKCVPSLAERNSSRKRMSHQVDDHLP--------PKQSTLPALMLYY 1887
            W+R+ +G FG  T     SL +     +R  H  ++ L         P   TL A+ML Y
Sbjct: 47   WKRD-QGVFGKETCADCASLIQTLCKHRR-PHLAEELLLELKCEGFLPDNRTLSAMMLCY 104

Query: 1886 AENGLFHQAQTTWEQLLNSSFVPSVRFISKLFDAYGKQGKFDEVMNVLHCVS-LRNFSTL 1710
            A++GL  QAQ  WE++L SSFVPSV+ IS L D Y K G FDEV+ +L  +S LR F  L
Sbjct: 105  ADSGLLPQAQAIWEEMLYSSFVPSVQVISDLIDIYAKSGLFDEVIKILDQLSSLRTFDFL 164

Query: 1709 PDVYSLAISCFGRGGQLELMEETTREMVSRGFHMDSKTGNAFLFYYSIFGSLKEMENAYG 1530
            P VYSLAISCFG+GGQLELME+T ++MVS+GF +DS TGNAF+ YYS+ GSL EME AY 
Sbjct: 165  PQVYSLAISCFGKGGQLELMEDTLKKMVSKGFWVDSATGNAFVVYYSLHGSLAEMEAAYD 224

Query: 1529 RFQRSRFLIEKEVIRAMASAYVKERKFYELGEFLRGVGLGRKNVGXXXXXXXXLSYAANF 1350
            R +RSR LIE+E IRAM+ AY+KERKFY L EFLR VGLGRKN+G        LSY+ANF
Sbjct: 225  RLKRSRLLIEREGIRAMSFAYIKERKFYGLSEFLRDVGLGRKNLGNLIWNLLLLSYSANF 284

Query: 1349 KMKSLQREFLRMVESGFRPDVTTFNIRALAFSRMSLFWDLHLSIEHMRHERVIPDLVTYG 1170
            KMK+LQREFL M+E+GF PD+TTFNIRALAFSRMSL WDLHL +EHM+H++V PDLVTYG
Sbjct: 285  KMKTLQREFLNMLEAGFHPDLTTFNIRALAFSRMSLLWDLHLGLEHMKHDKVAPDLVTYG 344

Query: 1169 CVVDAYLDRRLGRNLDFVLNKMNVDDSSLLLTDPFVFEVLGKGDFHMSSEAFLEYNTQQK 990
            C+VDAYLDRRL RNL+F L+KM+VD+S +L TDPFVFEV GKGDFH SSEAF+E+  Q+K
Sbjct: 345  CIVDAYLDRRLVRNLEFALSKMHVDNSPVLSTDPFVFEVFGKGDFHSSSEAFMEFKRQRK 404

Query: 989  WTYRVLIQKYLKKHYRRNQIFWNY 918
            WTYR LI+ YL+K +R   IFWNY
Sbjct: 405  WTYRELIKIYLRKQHRSKHIFWNY 428


>ref|XP_003615448.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355516783|gb|AES98406.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 310

 Score =  444 bits (1142), Expect = e-122
 Identities = 224/327 (68%), Positives = 263/327 (80%), Gaps = 1/327 (0%)
 Frame = -3

Query: 1898 MLYYAENGLFHQAQTTWEQLLNSSFVPSVRFISKLFDAYGKQGKFDEVMNVLHCVSLRNF 1719
            ML+Y EN LFHQ+Q+TWEQLLNSS+ PS+ FISKLF +Y KQ KF+E++N+LH +S +  
Sbjct: 1    MLHYTENALFHQSQSTWEQLLNSSYNPSLHFISKLFKSYTKQNKFNEIINILHSLSSKKL 60

Query: 1718 STLPDVYSLAISCFGRGGQLELMEETTREMVSRGFHMDSKTGNAFLFYYSIFGSLKEMEN 1539
            + LP  YSLAISCFG  G+++LMEET  EMVS+GF +DSKTGN  L  YS+FGSL EMEN
Sbjct: 61   TLLPQFYSLAISCFGAAGKVKLMEETIDEMVSKGFQIDSKTGNEILLCYSVFGSLNEMEN 120

Query: 1538 AYGRFQRSRFLIEKEVIRAMASAYVKERKFYELGEFLRGVGLGRKNVGXXXXXXXXLSYA 1359
            AYGRF+RSRFLIE+ VIRAM+  Y+K+RKFYELG+F+R VGLGR+NVG        LSY+
Sbjct: 121  AYGRFKRSRFLIEENVIRAMSYGYLKKRKFYELGQFVRDVGLGRRNVGNLLWNLLLLSYS 180

Query: 1358 ANFKMKSLQREFLRMVESGFRPDVTTFNIRALAFSRMSLFWDLHLSIEHMRHERVIPDLV 1179
            ANFKMKSLQREF+RMVE GFRPDVTTFNIRALAFSRM                 V+ DLV
Sbjct: 181  ANFKMKSLQREFVRMVELGFRPDVTTFNIRALAFSRM-----------------VVSDLV 223

Query: 1178 TYGCVVDAYLDRRLGRNLDFVLNKMNVDDSSLLLTDPFVFEVLGKGDFHMSSEAFLEYNT 999
            TYGCVVDAYLDRR GRNL+FVLNKM+VDD   LLTDPFVFEVLGKGDFH+SSEAF+E  T
Sbjct: 224  TYGCVVDAYLDRRHGRNLEFVLNKMDVDDCPWLLTDPFVFEVLGKGDFHLSSEAFMECKT 283

Query: 998  QQ-KWTYRVLIQKYLKKHYRRNQIFWN 921
            QQ +W+YRVLI+KYLKK +R +QIFWN
Sbjct: 284  QQHEWSYRVLIKKYLKKQHRMDQIFWN 310