BLASTX nr result

ID: Glycyrrhiza23_contig00008307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008307
         (1750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor ...   754   0.0  
ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor ...   736   0.0  
ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor ...   736   0.0  
gb|ACU19502.1| unknown [Glycine max]                                  729   0.0  
ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi...   672   0.0  

>ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max]
          Length = 497

 Score =  754 bits (1948), Expect(2) = 0.0
 Identities = 363/411 (88%), Positives = 380/411 (92%), Gaps = 1/411 (0%)
 Frame = -3

Query: 1745 KPLLDLSNRELGELPARNFPHRLGGSEDLVLRLDVFRKLEKHRGCVNTVGFNADGDIVVS 1566
            K + DL NRELG LP RNF  RLG SEDLVLRL++ R L+KHRGCVNTV FNADGD +VS
Sbjct: 13   KAIPDLCNRELGHLPPRNFALRLGASEDLVLRLELLRNLQKHRGCVNTVSFNADGDTLVS 72

Query: 1565 GSDDRRVILWDWESGHIKLSFHSGHSNNVFQAKIMPHSDDRSIVTCAADGQVRHAQILEN 1386
            GSDD  VILWDWE+G IKLSFHSGHSNNVFQAK MPHS DR+IVTCAADGQVRHAQILEN
Sbjct: 73   GSDDWGVILWDWETGRIKLSFHSGHSNNVFQAKFMPHSHDRTIVTCAADGQVRHAQILEN 132

Query: 1385 GGVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQPIKDRW 1206
            G VETK LAKHQGRAHKLA+EPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQPIKDRW
Sbjct: 133  GRVETKCLAKHQGRAHKLAVEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQPIKDRW 192

Query: 1205 NYMPVIHLNAIAIDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPTDFFCPPHLIG 1026
            +YMPVIHLNAIAIDPRNPNLFAVAGSDEY RLYDIR+YKWDGSTDFGQPTDFFCPPHLIG
Sbjct: 193  SYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRRYKWDGSTDFGQPTDFFCPPHLIG 252

Query: 1025 DERVGITGLAFSEQRELLVSYNDEFIYLFTQDMGLGPNPV-PGSPLSISSDASEMGGSHG 849
            D++VGITGLAFSEQRELLVSYNDE IYLFTQDMGLGPNP  PGSP S++SDASE+G SHG
Sbjct: 253  DQQVGITGLAFSEQRELLVSYNDELIYLFTQDMGLGPNPPDPGSPKSMNSDASEIGFSHG 312

Query: 848  SAQSPSNTDADDKITPQVFKGHRNCETVKGVNFFGPNCEYVVSGSDCGRIFIWKKKGGQL 669
            S  S SN DADDKITPQVFKGHRNCETVKGVNFFGP CEYVVSGSDCGRIFIWKKKGGQL
Sbjct: 313  SVSSQSNMDADDKITPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGQL 372

Query: 668  VRVMEADKHVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKIIEQ 516
            +RVMEADKHVVNCIESHPHTMVLASSGIE+DIKIWTPKALEKATLPK IEQ
Sbjct: 373  IRVMEADKHVVNCIESHPHTMVLASSGIENDIKIWTPKALEKATLPKNIEQ 423



 Score = 85.1 bits (209), Expect(2) = 0.0
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -1

Query: 433 QKPKARGWMYQIASPEDLMLQLFSLPRRRIRTRSNGENSAADRELLELILTF 278
           QKPKA+GWMY+IA PEDLM QL SLPRRR+RT SNGENS+ DR+LL+LILTF
Sbjct: 423 QKPKAKGWMYRIAYPEDLM-QLISLPRRRVRTESNGENSSTDRDLLQLILTF 473


>ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 1 [Glycine
            max]
          Length = 489

 Score =  736 bits (1901), Expect(2) = 0.0
 Identities = 355/411 (86%), Positives = 375/411 (91%), Gaps = 1/411 (0%)
 Frame = -3

Query: 1745 KPLLDLSNRELGELPARNFPHRLGGSEDLVLRLDVFRKLEKHRGCVNTVGFNADGDIVVS 1566
            K L DL NRE+G L  RNF  RLG SEDLVLRL + R L+KHRGCVN V FNADGDI+VS
Sbjct: 5    KALPDLCNREVGHLSPRNFALRLGSSEDLVLRLQLLRNLQKHRGCVNAVSFNADGDILVS 64

Query: 1565 GSDDRRVILWDWESGHIKLSFHSGHSNNVFQAKIMPHSDDRSIVTCAADGQVRHAQILEN 1386
            GSDD  +ILWDWE+G I+LSFHSGHSNNVFQAKIMPHSDDR+IVTCAADGQVRHAQ+LEN
Sbjct: 65   GSDDCGIILWDWETGRIRLSFHSGHSNNVFQAKIMPHSDDRTIVTCAADGQVRHAQLLEN 124

Query: 1385 GGVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQPIKDRW 1206
            G VETK LAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQ FDLRTGAATELFTCQPIKDRW
Sbjct: 125  GRVETKCLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQRFDLRTGAATELFTCQPIKDRW 184

Query: 1205 NYMPVIHLNAIAIDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPTDFFCPPHLIG 1026
            +YMPVIHLNAIAIDPRNPNLFAVAGSDEY RLYDIRKYKWDGSTDFGQPT+FFCPPHLIG
Sbjct: 185  SYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRKYKWDGSTDFGQPTNFFCPPHLIG 244

Query: 1025 DERVGITGLAFSEQRELLVSYNDEFIYLFTQDMGLGPNPV-PGSPLSISSDASEMGGSHG 849
            D++VGITGLAFSE RELLVSYNDE IYLFTQDMGLGPNP  P SP S++SDASE+G SHG
Sbjct: 245  DQQVGITGLAFSELRELLVSYNDELIYLFTQDMGLGPNPPDPVSPKSMNSDASEIGFSHG 304

Query: 848  SAQSPSNTDADDKITPQVFKGHRNCETVKGVNFFGPNCEYVVSGSDCGRIFIWKKKGGQL 669
            S  S S  DAD+K+TPQVFKGHRNCETVKGVNFFGP CEYVVSGSDCGRIFIWKKK GQL
Sbjct: 305  SVSSQSKMDADEKVTPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKSGQL 364

Query: 668  VRVMEADKHVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKIIEQ 516
            +RVMEADK+VVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPK IEQ
Sbjct: 365  IRVMEADKYVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKNIEQ 415



 Score = 85.1 bits (209), Expect(2) = 0.0
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -1

Query: 433 QKPKARGWMYQIASPEDLMLQLFSLPRRRIRTRSNGENSAADRELLELILTF 278
           QKPKA+GWMY+IA PEDLM QL SLPRRR+RT SNGENS+ DR+LL+LILTF
Sbjct: 415 QKPKAKGWMYRIAYPEDLM-QLISLPRRRVRTESNGENSSTDRDLLQLILTF 465


>ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 2 [Glycine
            max]
          Length = 490

 Score =  736 bits (1901), Expect(2) = 0.0
 Identities = 355/411 (86%), Positives = 375/411 (91%), Gaps = 1/411 (0%)
 Frame = -3

Query: 1745 KPLLDLSNRELGELPARNFPHRLGGSEDLVLRLDVFRKLEKHRGCVNTVGFNADGDIVVS 1566
            K L DL NRE+G L  RNF  RLG SEDLVLRL + R L+KHRGCVN V FNADGDI+VS
Sbjct: 5    KALPDLCNREVGHLSPRNFALRLGSSEDLVLRLQLLRNLQKHRGCVNAVSFNADGDILVS 64

Query: 1565 GSDDRRVILWDWESGHIKLSFHSGHSNNVFQAKIMPHSDDRSIVTCAADGQVRHAQILEN 1386
            GSDD  +ILWDWE+G I+LSFHSGHSNNVFQAKIMPHSDDR+IVTCAADGQVRHAQ+LEN
Sbjct: 65   GSDDCGIILWDWETGRIRLSFHSGHSNNVFQAKIMPHSDDRTIVTCAADGQVRHAQLLEN 124

Query: 1385 GGVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQPIKDRW 1206
            G VETK LAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQ FDLRTGAATELFTCQPIKDRW
Sbjct: 125  GRVETKCLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQRFDLRTGAATELFTCQPIKDRW 184

Query: 1205 NYMPVIHLNAIAIDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPTDFFCPPHLIG 1026
            +YMPVIHLNAIAIDPRNPNLFAVAGSDEY RLYDIRKYKWDGSTDFGQPT+FFCPPHLIG
Sbjct: 185  SYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRKYKWDGSTDFGQPTNFFCPPHLIG 244

Query: 1025 DERVGITGLAFSEQRELLVSYNDEFIYLFTQDMGLGPNPV-PGSPLSISSDASEMGGSHG 849
            D++VGITGLAFSE RELLVSYNDE IYLFTQDMGLGPNP  P SP S++SDASE+G SHG
Sbjct: 245  DQQVGITGLAFSELRELLVSYNDELIYLFTQDMGLGPNPPDPVSPKSMNSDASEIGFSHG 304

Query: 848  SAQSPSNTDADDKITPQVFKGHRNCETVKGVNFFGPNCEYVVSGSDCGRIFIWKKKGGQL 669
            S  S S  DAD+K+TPQVFKGHRNCETVKGVNFFGP CEYVVSGSDCGRIFIWKKK GQL
Sbjct: 305  SVSSQSKMDADEKVTPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKSGQL 364

Query: 668  VRVMEADKHVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKIIEQ 516
            +RVMEADK+VVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPK IEQ
Sbjct: 365  IRVMEADKYVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKNIEQ 415



 Score = 83.2 bits (204), Expect(2) = 0.0
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = -1

Query: 430 KPKARGWMYQIASPEDLMLQLFSLPRRRIRTRSNGENSAADRELLELILTF 278
           KPKA+GWMY+IA PEDLM QL SLPRRR+RT SNGENS+ DR+LL+LILTF
Sbjct: 417 KPKAKGWMYRIAYPEDLM-QLISLPRRRVRTESNGENSSTDRDLLQLILTF 466


>gb|ACU19502.1| unknown [Glycine max]
          Length = 489

 Score =  729 bits (1881), Expect(2) = 0.0
 Identities = 352/411 (85%), Positives = 372/411 (90%), Gaps = 1/411 (0%)
 Frame = -3

Query: 1745 KPLLDLSNRELGELPARNFPHRLGGSEDLVLRLDVFRKLEKHRGCVNTVGFNADGDIVVS 1566
            K L DL NRE+G L  RNF  RL  SEDLVLRL + R L+KHRGCVN V FNADGDI+VS
Sbjct: 5    KALPDLCNREVGHLSPRNFALRLDSSEDLVLRLQLLRNLQKHRGCVNAVSFNADGDILVS 64

Query: 1565 GSDDRRVILWDWESGHIKLSFHSGHSNNVFQAKIMPHSDDRSIVTCAADGQVRHAQILEN 1386
            GSDD  +ILWDWE+G I+LSFHSGHSNNVFQAKIMPHSDDR+IVTCAADGQVRHAQ+LEN
Sbjct: 65   GSDDCGIILWDWETGRIRLSFHSGHSNNVFQAKIMPHSDDRTIVTCAADGQVRHAQLLEN 124

Query: 1385 GGVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQPIKDRW 1206
            G VETK LAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQ FDLRTGAATELFTCQPIKDRW
Sbjct: 125  GRVETKCLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQRFDLRTGAATELFTCQPIKDRW 184

Query: 1205 NYMPVIHLNAIAIDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPTDFFCPPHLIG 1026
            +YMPVIHLNAIAIDPRNPNLFAVAGSDEY RLYDIRKYKWDGST FGQPT+FFCPPHLIG
Sbjct: 185  SYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRKYKWDGSTGFGQPTNFFCPPHLIG 244

Query: 1025 DERVGITGLAFSEQRELLVSYNDEFIYLFTQDMGLGPNPV-PGSPLSISSDASEMGGSHG 849
            D++VGITGLAFSE RELLVSYNDE IYLFTQDMGLGPNP  P SP S++SDASE+G SHG
Sbjct: 245  DQQVGITGLAFSELRELLVSYNDELIYLFTQDMGLGPNPPDPVSPKSMNSDASEIGFSHG 304

Query: 848  SAQSPSNTDADDKITPQVFKGHRNCETVKGVNFFGPNCEYVVSGSDCGRIFIWKKKGGQL 669
            S  S S  DAD+K+TPQVFKGHRNCETVKGVNFFGP CEYVVSGSDCGRIFIWKKK GQL
Sbjct: 305  SVSSQSKMDADEKVTPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKSGQL 364

Query: 668  VRVMEADKHVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKIIEQ 516
            +RVMEADK+VVNCIE HPHTMVLASSGIEHDIKIWTPKALEKATLPK IEQ
Sbjct: 365  IRVMEADKYVVNCIEFHPHTMVLASSGIEHDIKIWTPKALEKATLPKNIEQ 415



 Score = 85.1 bits (209), Expect(2) = 0.0
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -1

Query: 433 QKPKARGWMYQIASPEDLMLQLFSLPRRRIRTRSNGENSAADRELLELILTF 278
           QKPKA+GWMY+IA PEDLM QL SLPRRR+RT SNGENS+ DR+LL+LILTF
Sbjct: 415 QKPKAKGWMYRIAYPEDLM-QLISLPRRRVRTESNGENSSTDRDLLQLILTF 465


>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
            gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 482

 Score =  672 bits (1733), Expect(2) = 0.0
 Identities = 319/405 (78%), Positives = 356/405 (87%)
 Frame = -3

Query: 1745 KPLLDLSNRELGELPARNFPHRLGGSEDLVLRLDVFRKLEKHRGCVNTVGFNADGDIVVS 1566
            K +L++  RE+GEL  RNF HRL  SEDLVLRLD+++KL+KHRGCVNTV FNA+GDI+VS
Sbjct: 11   KAVLNVWQREVGELSTRNFAHRLAASEDLVLRLDLYKKLDKHRGCVNTVSFNANGDILVS 70

Query: 1565 GSDDRRVILWDWESGHIKLSFHSGHSNNVFQAKIMPHSDDRSIVTCAADGQVRHAQILEN 1386
            GSDDRRVILWDWESG IKLSFHSGH+ NVFQAKIMP++DDRSIVTCAADGQVR AQILE 
Sbjct: 71   GSDDRRVILWDWESGRIKLSFHSGHTKNVFQAKIMPYTDDRSIVTCAADGQVRFAQILEC 130

Query: 1385 GGVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQPIKDRW 1206
            G VET LLAKHQGRAHKLAIEPGSP+I YTCGEDGLVQHFDLRT  ATELF+C+PI DR 
Sbjct: 131  GAVETTLLAKHQGRAHKLAIEPGSPYILYTCGEDGLVQHFDLRTRRATELFSCRPIDDRR 190

Query: 1205 NYMPVIHLNAIAIDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPTDFFCPPHLIG 1026
             YMPV+HLNAI IDPRNPNLFAVAGSDEYTRLYDIR YKWDGST+FGQPTD+FCPPHLIG
Sbjct: 191  EYMPVVHLNAITIDPRNPNLFAVAGSDEYTRLYDIRMYKWDGSTEFGQPTDYFCPPHLIG 250

Query: 1025 DERVGITGLAFSEQRELLVSYNDEFIYLFTQDMGLGPNPVPGSPLSISSDASEMGGSHGS 846
            DERVGITGL+FS+Q ELLVSYNDE IYLFT+DMGLGPNP P SP+SI S A E+      
Sbjct: 251  DERVGITGLSFSDQSELLVSYNDELIYLFTRDMGLGPNPDPSSPVSIGSSAGEL------ 304

Query: 845  AQSPSNTDADDKITPQVFKGHRNCETVKGVNFFGPNCEYVVSGSDCGRIFIWKKKGGQLV 666
                +  D D K++PQV++GH+NCETVKGV+FFGP CEYVVSGSDCGRIFIWKKKGG+L+
Sbjct: 305  ----ACMDVDGKVSPQVYEGHQNCETVKGVSFFGPGCEYVVSGSDCGRIFIWKKKGGELI 360

Query: 665  RVMEADKHVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLP 531
            R MEADKHVVNCIE HPH  VLASSGIE+DIK+WTPKA+E+ATLP
Sbjct: 361  RAMEADKHVVNCIEPHPHATVLASSGIENDIKMWTPKAIERATLP 405



 Score = 72.4 bits (176), Expect(2) = 0.0
 Identities = 37/51 (72%), Positives = 41/51 (80%)
 Frame = -1

Query: 430 KPKARGWMYQIASPEDLMLQLFSLPRRRIRTRSNGENSAADRELLELILTF 278
           KPKARGWMY+IASP+DLMLQLFSL R R       E+SAA RELLEL+LTF
Sbjct: 412 KPKARGWMYRIASPQDLMLQLFSLQRWRTSPERIEESSAAGRELLELMLTF 462


Top