BLASTX nr result

ID: Glycyrrhiza23_contig00008280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008280
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ...   100   8e-19
ref|NP_085590.1| hypothetical protein ArthMp112 [Arabidopsis tha...    64   1e-17
ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula] ...    95   3e-17
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    95   3e-17
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]    85   3e-14

>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
           gi|355477358|gb|AES58561.1| hypothetical protein
           MTR_1g005810 [Medicago truncatula]
          Length = 146

 Score = 99.8 bits (247), Expect = 8e-19
 Identities = 55/67 (82%), Positives = 55/67 (82%), Gaps = 10/67 (14%)
 Frame = +2

Query: 272 ERNESFALGKRFA----------RAKLRPLLLVTSGRLIPSPEIQVSTGKDLLIPRGRAG 421
           ERNESFALGKRFA          RAKLRP LLVTSGRL PSPEIQVSTGKDLLIPRGRAG
Sbjct: 15  ERNESFALGKRFAVAKLTASLSPRAKLRPRLLVTSGRLFPSPEIQVSTGKDLLIPRGRAG 74

Query: 422 LEASYLS 442
           LEASYLS
Sbjct: 75  LEASYLS 81


>ref|NP_085590.1| hypothetical protein ArthMp112 [Arabidopsis thaliana]
           gi|45477081|sp|P92567.1|M1410_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg01410;
           AltName: Full=ORF204 gi|1785791|emb|CAA69788.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 204

 Score = 63.5 bits (153), Expect(2) = 1e-17
 Identities = 26/56 (46%), Positives = 40/56 (71%)
 Frame = -2

Query: 629 PLFTITHH*VMFYCEEKVYPGQRLTRYAILGDDVCIADENVASLYRQTVNDLGLAI 462
           P F ++HH ++++C ++V+PG R T YA+LGDDV IAD+ VA +Y   +  LG+ I
Sbjct: 102 PTFALSHHILVWWCAKQVHPGVRFTSYAVLGDDVVIADQEVAKVYESALGGLGVKI 157



 Score = 53.1 bits (126), Expect(2) = 1e-17
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = -3

Query: 850 DR*KGFSKVYSFDLKSATDRWPLSLQTNLIRTFFGKSF-GDCLDAIFSRSIFEVPF--LR 680
           DR  G    +SFDLKSATDRWPL     +++  F +SF    +++ F+ +IFEVPF  L+
Sbjct: 22  DRLVGSRHSFSFDLKSATDRWPLVFLFEVVQYLFDRSFASSVVNSAFACNIFEVPFVKLK 81

Query: 679 SXXXXXXXXXGQPLGF 632
                     GQPLG+
Sbjct: 82  RRFSQVCFVAGQPLGY 97


>ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477460|gb|AES58663.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 159

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 53/67 (79%), Positives = 53/67 (79%), Gaps = 10/67 (14%)
 Frame = -1

Query: 432 LASKPARPRGIKRSLPVLTWISGDGIRRPEVTSSSGRSLAL----------AKRLPSAKD 283
           LASKPARPRGIKRSLPVLTWISGDG RRPEVTSS GRSLAL          AKRLPSAKD
Sbjct: 38  LASKPARPRGIKRSLPVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 97

Query: 282 SFLSQRA 262
           SFLS  A
Sbjct: 98  SFLSPDA 104


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477385|gb|AES58588.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 1152

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 53/67 (79%), Positives = 53/67 (79%), Gaps = 10/67 (14%)
 Frame = -1

Query: 432  LASKPARPRGIKRSLPVLTWISGDGIRRPEVTSSSGRSLAL----------AKRLPSAKD 283
            LASKPARPRGIKRSLPVLTWISGDG RRPEVTSS GRSLAL          AKRLPSAKD
Sbjct: 1031 LASKPARPRGIKRSLPVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 1090

Query: 282  SFLSQRA 262
            SFLS  A
Sbjct: 1091 SFLSPDA 1097


>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 44/56 (78%), Positives = 46/56 (82%)
 Frame = +2

Query: 302 RFARAKLRPLLLVTSGRLIPSPEIQVSTGKDLLIPRGRAGLEASYLSPISPPFLLR 469
           RF RAKLRP LLV SGRLIPSPEIQVSTGKDLLIPRGRAGLEASY   ++  F  R
Sbjct: 35  RFRRAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYRKLLATRFYAR 90


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