BLASTX nr result

ID: Glycyrrhiza23_contig00008255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008255
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530783.1| PREDICTED: uncharacterized protein LOC100818...   147   3e-34
ref|XP_003600257.1| ABI3-interacting protein [Medicago truncatul...   105   2e-21
ref|XP_003617693.1| CCP [Medicago truncatula] gi|355519028|gb|AE...    94   1e-18
ref|XP_003518541.1| PREDICTED: protein FRIGIDA-like [Glycine max]      85   1e-14
ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinif...    64   1e-08

>ref|XP_003530783.1| PREDICTED: uncharacterized protein LOC100818664 [Glycine max]
          Length = 546

 Score =  147 bits (370), Expect(2) = 3e-34
 Identities = 88/157 (56%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
 Frame = +3

Query: 141 MATLKTISAALSLIDAKKENLKKAFXXXXXXXXXXXXXXXXX--HFTSLQHSLTHRFHLL 314
           MATLKTISAAL+L+D+KKENLKKAF                   HFT+L HSLTHRF+LL
Sbjct: 1   MATLKTISAALNLVDSKKENLKKAFDNLHSLLSPLPLSWLDLDSHFTTLHHSLTHRFNLL 60

Query: 315 QSLEQSHSQTQPQPKTLITDPNNLAPQNANFPANTYRPPSNWNDGSAGVFPKNYVVPGSV 494
           QS    HSQT     T I DP    PQ+ NF +N   P SN ++ S GV  +N VVPG V
Sbjct: 61  QS----HSQTL----TPIPDPPPHTPQDVNFSSNPTDPSSNHDESSPGVSLQNDVVPGPV 112

Query: 495 VPRYALSVLCEKMDGVGLRNYVKCHFKDRIRVQAELP 605
            PR  L  LCEKMDGVGL NYV  +F+DR RVQAELP
Sbjct: 113 TPRNELVALCEKMDGVGLMNYVNDNFQDRTRVQAELP 149



 Score = 24.3 bits (51), Expect(2) = 3e-34
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 608 ALRCAPDPAVMVLGSLE 658
           A R APD   MVLG+LE
Sbjct: 151 AFRHAPDAGTMVLGALE 167


>ref|XP_003600257.1| ABI3-interacting protein [Medicago truncatula]
           gi|355489305|gb|AES70508.1| ABI3-interacting protein
           [Medicago truncatula]
          Length = 525

 Score =  105 bits (261), Expect(2) = 2e-21
 Identities = 68/154 (44%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
 Frame = +3

Query: 147 TLKTISAALSLIDAKKENLKKAFXXXXXXXXXXXXXXXXX--HFTSLQHSLTHRFHLLQS 320
           TL+TIS+AL+LID+KK+NLK AF                   HFTSLQ SLTHRF  LQS
Sbjct: 4   TLETISSALNLIDSKKQNLKIAFENLQSKSSSLPLSWLQLDSHFTSLQQSLTHRFQFLQS 63

Query: 321 LEQSHSQTQPQPKTLITDPNNLAPQNANFPANTYRPPSNWNDGSAGVFPKNYVVPGSVVP 500
           LEQ     Q Q +TLI++ N    +  NF  N   P S+                     
Sbjct: 64  LEQ-----QSQSRTLISNSNAETSKKTNFSTNPKDPISH--------------------- 97

Query: 501 RYALSVLCEKMDGVGLRNYVKCHFKDRIRVQAEL 602
           R  L VLCEK+DG+GLRNY+  ++KD+IRV+AEL
Sbjct: 98  RKELRVLCEKIDGIGLRNYIDKNYKDKIRVEAEL 131



 Score = 23.1 bits (48), Expect(2) = 2e-21
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +2

Query: 614 RCAPDPAVMVLGSLEG 661
           R APD   MVL SLEG
Sbjct: 136 RSAPDAGEMVLQSLEG 151


>ref|XP_003617693.1| CCP [Medicago truncatula] gi|355519028|gb|AET00652.1| CCP [Medicago
           truncatula]
          Length = 644

 Score = 94.4 bits (233), Expect(2) = 1e-18
 Identities = 60/157 (38%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
 Frame = +3

Query: 147 TLKTISAALSLIDAKKENLKKAFXXXXXXXXXXXXXXXXX-----HFTSLQHSLTHRFHL 311
           T KTISAAL LID KKENLKKA+                      HFT+L ++L+ RF  
Sbjct: 4   TSKTISAALKLIDNKKENLKKAYDDLQSHSSHLSSFPLSWPDIDSHFTTLHNTLSQRFLH 63

Query: 312 LQSLEQSHSQTQPQPKTLITDPNNLAPQNANFPANTYRPPSNWNDGSAGVFPKNYVVPGS 491
           LQSLE    Q    P    +  +   P+N NF +    P SN N        +N  V GS
Sbjct: 64  LQSLESQFQQNHNDPSISSSKLSTTKPKNQNFSSINNDPSSNSNPTI-----QNGAVSGS 118

Query: 492 VVPRYALSVLCEKMDGVGLRNYVKCHFKDRIRVQAEL 602
           +     LS LC+K DG GLR++++ +FKD++ ++ EL
Sbjct: 119 ITHLEGLSALCKKNDGKGLRDFIRVNFKDKVTIKDEL 155



 Score = 24.6 bits (52), Expect(2) = 1e-18
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 608 ALRCAPDPAVMVLGSLEG 661
           A +CA +PA MVL +L+G
Sbjct: 158 AFKCASNPADMVLDALDG 175


>ref|XP_003518541.1| PREDICTED: protein FRIGIDA-like [Glycine max]
          Length = 519

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 62/160 (38%), Positives = 74/160 (46%), Gaps = 6/160 (3%)
 Frame = +3

Query: 141 MATLKTISAALSLIDAKKENLKKAFXXXXXXXXXXXXXXXXX------HFTSLQHSLTHR 302
           M T KTISAAL L DAKKENLKKA+                       HFTSL  SL+HR
Sbjct: 1   METSKTISAALKLFDAKKENLKKAYYDLQSHSSLLAPSFSLSWSHLDAHFTSLHTSLSHR 60

Query: 303 FHLLQSLEQSHSQTQPQPKTLITDPNNLAPQNANFPANTYRPPSNWNDGSAGVFPKNYVV 482
           FHLLQSLE         P   +           +FP +   P S   +G+A   PKN   
Sbjct: 61  FHLLQSLESQQQYPPSSPSKYL-----------SFPPSPTDPSS--QNGTA--LPKN--- 102

Query: 483 PGSVVPRYALSVLCEKMDGVGLRNYVKCHFKDRIRVQAEL 602
                P   +  LC  MDG GLR+YV  H KD+  ++  L
Sbjct: 103 -----PSEQILTLCNNMDGKGLRDYVGDHLKDKAAIEDTL 137


>ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinifera]
          Length = 533

 Score = 63.5 bits (153), Expect(2) = 1e-08
 Identities = 56/176 (31%), Positives = 74/176 (42%), Gaps = 22/176 (12%)
 Frame = +3

Query: 141 MATLKTISAALSLIDAKKENLKKAF-----XXXXXXXXXXXXXXXXXHFTSLQHSLTHRF 305
           MA LKTISAAL LIDAKKE+L+KAF                      HF+S+Q SL+ +F
Sbjct: 1   MAELKTISAALKLIDAKKESLRKAFEDLEAHSSSLSSFTLTWSAIDAHFSSIQSSLSRQF 60

Query: 306 HLLQSLEQSHSQTQPQP-----------KTLITDPNN----LAPQN--ANFPANTYRPPS 434
            +L+S   S  Q    P             +   P N    L PQN   + P        
Sbjct: 61  EILESRTDSVPQNDTLPTNNAVSLPAQSNAVSLPPQNNAVSLPPQNNAVSLPPQESAISR 120

Query: 435 NWNDGSAGVFPKNYVVPGSVVPRYALSVLCEKMDGVGLRNYVKCHFKDRIRVQAEL 602
              + +    P+N   P        L +LC  MD   LR Y+  H  DR  +++EL
Sbjct: 121 PTQNSAVSRPPQNNANPS----HPQLRLLCSAMDAEALRRYIMDHPNDRETLRSEL 172



 Score = 21.2 bits (43), Expect(2) = 1e-08
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 608 ALRCAPDPAVMVLGSLEG 661
           A + A DPA MVL +L G
Sbjct: 175 AFQVARDPAKMVLDALTG 192


Top