BLASTX nr result
ID: Glycyrrhiza23_contig00008212
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00008212
(3716 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein... 1870 0.0
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein... 1866 0.0
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein... 1683 0.0
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein... 1595 0.0
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]... 1549 0.0
>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1088
Score = 1870 bits (4844), Expect = 0.0
Identities = 954/1089 (87%), Positives = 984/1089 (90%), Gaps = 1/1089 (0%)
Frame = +3
Query: 207 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 386
MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQ+R
Sbjct: 1 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR 60
Query: 387 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 566
QILEEGSSPEID+YYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120
Query: 567 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 746
SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGD DNVPALLGQACVEFNRGR+SD
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD 180
Query: 747 SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 926
SLELYKR LQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVE+L+ALAIM
Sbjct: 181 SLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIM 240
Query: 927 DLRTNEASGIMKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 1106
DLRTNEA+GI GMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241 DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
Query: 1107 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 1286
GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKE++KPHEFVFPYYGLGQVQIKLGDF+S
Sbjct: 301 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360
Query: 1287 ALSNFEKVLEVYPDNCETLKALGYIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 1466
ALSNFEKVLEVYPDNCETLKALG+IYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL
Sbjct: 361 ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420
Query: 1467 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIW 1646
ILSDTGAALDAFKTA TLFKKGGQEVPIELLNNIGVLQFERGEFELA+QTFKEALGDG+W
Sbjct: 421 ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW 480
Query: 1647 LSFINEENKSSFDASTSTLQFKDMQLFHGLESNGHHVEVPWDKVTVLFNLARLLEQLNKS 1826
LSFINEENKSS DA+TSTLQFKDMQLFH LESNGHHVEVPWDKVTVLFNLARLLEQL S
Sbjct: 481 LSFINEENKSSIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYDS 540
Query: 1827 GTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLGE 2006
GTASI YRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVN+KCPNALSMLGE
Sbjct: 541 GTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGE 600
Query: 2007 LELKNDDWVKAKESLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK 2186
LELKNDDWVKAKE+LR ASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK
Sbjct: 601 LELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK 660
Query: 2187 ELYTRVLIQHSANLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA 2366
EL TRVLIQHS+NLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA
Sbjct: 661 ELCTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA 720
Query: 2367 HVYFAQGNFSLAVKMYQNCLRKFYYNTDSQILLYQARTHYEAEQWQDCIKTLLRAIHLAP 2546
HVYFAQGNF+LAVKMYQNCLRKFY+NTDSQILLY ARTHYEAEQWQDCIKTLLRAIHLAP
Sbjct: 721 HVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAP 780
Query: 2547 SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNLHIHGFD 2726
SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVR+FSQLSAASNLHIHGFD
Sbjct: 781 SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFD 840
Query: 2727 EKKIDTHVGYCNHLLSAAKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFQM 2906
EKKIDTHVGYCNHLLSAAKVH KFQM
Sbjct: 841 EKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQM 900
Query: 2907 ERRKQEDEIKRVQQQEEHFKRVKEQWKSSTHSKRRERSXXXXXXXXXXXXXXXXXXXXXX 3086
ERRKQEDE+KRVQ+QEEHF+RVKEQWKSS+HSKRRERS
Sbjct: 901 ERRKQEDELKRVQKQEEHFRRVKEQWKSSSHSKRRERSDDEEGGTGEKKRKKGGKRRKKD 960
Query: 3087 XHSKSHYXXXXXXXXXXXXXXXXXXXXXINYKEEAQTNVNDDVEENAQGLLAAVGLEDSD 3266
HSK Y INY+EE QT +NDD EENAQGLLAA GLEDSD
Sbjct: 961 KHSKLRYDAEEPEDDLMDEQGMEDEEADINYREEPQTQMNDDAEENAQGLLAAAGLEDSD 1020
Query: 3267 VDDEMAAPSSTIARRRQALSESDDDEP-LQRQSSPIRENSADMQESDGEIRDGGDKTNGG 3443
D+E AAPSS+IARRRQALSESDDDEP LQRQSSP+R+NSADMQ SDGEIRD GDKTNG
Sbjct: 1021 ADEETAAPSSSIARRRQALSESDDDEPLLQRQSSPVRQNSADMQLSDGEIRD-GDKTNGD 1079
Query: 3444 DTSDEEKQY 3470
D +DEEKQY
Sbjct: 1080 DGNDEEKQY 1088
>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1086
Score = 1866 bits (4834), Expect = 0.0
Identities = 958/1090 (87%), Positives = 985/1090 (90%), Gaps = 2/1090 (0%)
Frame = +3
Query: 207 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 386
MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGKIDQFR
Sbjct: 1 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60
Query: 387 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 566
QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120
Query: 567 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 746
SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180
Query: 747 SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 926
SLELYKRAL VYP+CPAAVRLGIGLCRYKLGQFEKAQQAFER LDPENVEALVALAIM
Sbjct: 181 SLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFER---LDPENVEALVALAIM 237
Query: 927 DLRTNEASGIMKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 1106
DLRTNEA+GI GMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 238 DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297
Query: 1107 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 1286
GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKE++KPHEFVFPYYGLGQVQIKLGDF+S
Sbjct: 298 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 357
Query: 1287 ALSNFEKVLEVYPDNCETLKALGYIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 1466
ALSNFEKVLEVYPDNCETLKALG+IYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL
Sbjct: 358 ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 417
Query: 1467 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIW 1646
ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDG+W
Sbjct: 418 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVW 477
Query: 1647 LSFINEENKSSFDASTSTLQFKDMQLFHGLESNGHHVEVPWDKVTVLFNLARLLEQLNKS 1826
LSFINEE KSS DA+TSTLQFKDM+LFH LESNGHHVEVPWDKVTVLFNLARLLEQLN S
Sbjct: 478 LSFINEEKKSSIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLNDS 537
Query: 1827 GTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLGE 2006
GTASILYRL+LFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVN+KCPNALSMLGE
Sbjct: 538 GTASILYRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGE 597
Query: 2007 LELKNDDWVKAKESLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK 2186
LELKNDDWVKAKE+LRAASDAT+GKDSYA+LSLGNWNYFAAVRNEKRNPKLEATHLEKAK
Sbjct: 598 LELKNDDWVKAKETLRAASDATEGKDSYASLSLGNWNYFAAVRNEKRNPKLEATHLEKAK 657
Query: 2187 ELYTRVLIQHSANLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA 2366
ELYTRVLIQHS+NLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA
Sbjct: 658 ELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA 717
Query: 2367 HVYFAQGNFSLAVKMYQNCLRKFYYNTDSQILLYQARTHYEAEQWQDCIKTLLRAIHLAP 2546
HVYFAQGNF+LAVKMYQNCLRKFY+NTDSQILLY ARTHYEAEQWQDCIKTLLRAIHLAP
Sbjct: 718 HVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAP 777
Query: 2547 SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNLHIHGFD 2726
SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVR+FSQLSAASNLHIHGFD
Sbjct: 778 SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFD 837
Query: 2727 EKKIDTHVGYCNHLLSAAKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFQM 2906
EKKIDTHVGYCNHLLSAAKVH KFQM
Sbjct: 838 EKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKFQM 897
Query: 2907 ERRKQEDEIKRVQQQEEHFKRVKEQWKSSTHSKRRERS-XXXXXXXXXXXXXXXXXXXXX 3083
ERRKQEDE+KRVQQQEEHF+RVKEQWKSS+HSKRRERS
Sbjct: 898 ERRKQEDELKRVQQQEEHFRRVKEQWKSSSHSKRRERSDDEEGGGTGEKKRKKGGKRRKK 957
Query: 3084 XXHSKSHYXXXXXXXXXXXXXXXXXXXXXINYKEEAQTNVNDDVEENAQGLLAAVGLEDS 3263
HSKS Y INY+EE QT +NDD EENAQGLLAA GLEDS
Sbjct: 958 DKHSKSRYDTEEPENDMMDEQEMEDEEADINYREEPQTQMNDDAEENAQGLLAAAGLEDS 1017
Query: 3264 DVDDEMAAPSSTIARRRQALSESDDDEPL-QRQSSPIRENSADMQESDGEIRDGGDKTNG 3440
D D+E APSS+IARRRQALSESDDDEPL QRQSSP RENSADMQ SDGEIRD GDKTNG
Sbjct: 1018 DADEEAPAPSSSIARRRQALSESDDDEPLIQRQSSPARENSADMQLSDGEIRD-GDKTNG 1076
Query: 3441 GDTSDEEKQY 3470
D S+EEKQY
Sbjct: 1077 DDGSEEEKQY 1086
>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
product [Vitis vinifera]
Length = 1091
Score = 1683 bits (4359), Expect = 0.0
Identities = 863/1091 (79%), Positives = 936/1091 (85%), Gaps = 6/1091 (0%)
Frame = +3
Query: 207 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 386
MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR
Sbjct: 1 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60
Query: 387 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 566
QILEEGSSPEID+YYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120
Query: 567 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 746
SRIDMHE STWVGKGQLLLAKG+VEQA AAFKIVLDGDRDNVPALLGQACVEFNRGRYSD
Sbjct: 121 SRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180
Query: 747 SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 926
SL+LYKRALQVYP+CPAAVR+GIGLC YKLGQFEKA++AF+RVLQLDPENVEALVAL IM
Sbjct: 181 SLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIM 240
Query: 927 DLRTNEASGIMKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 1106
DL TN+ASGI KGM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241 DLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
Query: 1107 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 1286
GPTKSHSYYNLARSYHSKGDY+KAG+YYMASVKE +KPH+FV PYYGLGQVQ+KLGDFRS
Sbjct: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRS 360
Query: 1287 ALSNFEKVLEVYPDNCETLKALGYIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 1466
+LSNFEKVLEVYP+NCE LKALG+IYVQLGQT+K Q+++RKATKIDPRDAQAFL+LGELL
Sbjct: 361 SLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 420
Query: 1467 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIW 1646
I SDTGAALDAFKTAR L KKGG+EVPIELLNNIGVL FERGEFELA+QTFKEA+GDGIW
Sbjct: 421 ITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIW 480
Query: 1647 LSFINEENKS-SFDASTSTLQFKDMQLFHGLESNGHHVEVPWDKVTVLFNLARLLEQLNK 1823
LSFI+++ S + DA TS FKDMQLFH LE +GH VE+PW+KVTVLFNLARLLEQLN
Sbjct: 481 LSFIDDKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNN 540
Query: 1824 SGTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLG 2003
+ TASILYRLILFK+PDYIDAYLRLAAIAKARNNI LSIELV DALKVNDK PN+L MLG
Sbjct: 541 TKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLG 600
Query: 2004 ELELKNDDWVKAKESLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 2183
+LELKNDDWVKAKE+ R+ASDATDGKDSYATLSLGNWNYFAA+R+EKR PKLEATHLEKA
Sbjct: 601 DLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRSEKRAPKLEATHLEKA 660
Query: 2184 KELYTRVLIQHSANLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 2363
KELYTRVL+QH+ANLYAANGA VVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL
Sbjct: 661 KELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 720
Query: 2364 AHVYFAQGNFSLAVKMYQNCLRKFYYNTDSQILLYQARTHYEAEQWQDCIKTLLRAIHLA 2543
AHVYFAQGNF+LAVKMYQNCLRKFYYNTDSQ+LLY ARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 721 AHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 780
Query: 2544 PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNLHIHGF 2723
PSNYTLRFDAGVAMQKFSASTLQK KRTADEVR+TVAEL+NAVRIFSQLSAASNLH HGF
Sbjct: 781 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRIFSQLSAASNLHFHGF 840
Query: 2724 DEKKIDTHVGYCNHLLSAAKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFQ 2903
DEKKI+THVGYC HLL AAKVH KFQ
Sbjct: 841 DEKKIETHVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNLAEEARRKAEEQRKFQ 900
Query: 2904 MERRKQEDEIKRVQQQEEHFKRVKEQWKSST-HSKRRERSXXXXXXXXXXXXXXXXXXXX 3080
+ERRKQEDE+KRV QQE+HF+RVKEQWKS+ +SKR+ERS
Sbjct: 901 LERRKQEDELKRVMQQEQHFERVKEQWKSNNLNSKRKERSQIDDDEGGQSERRRRKGGKR 960
Query: 3081 XXXHSKSHYXXXXXXXXXXXXXXXXXXXXXINYKEEA--QTNVNDDVEENAQGLLAAVGL 3254
+ +N++E N +DD E++AQ LLAA GL
Sbjct: 961 RKKDKSRYDSEEARADAMDDQDEMEDEDTNMNHRESTNQMNNQDDDGEDDAQDLLAAAGL 1020
Query: 3255 EDSDVDDEMAAPSSTIARRRQALSESDDDEPLQR--QSSPIRENSADMQESDGEIRDGGD 3428
EDSD +D+MA PSS RR++A SESD+DEP + +SSP+RENSA++QESDGEI+D D
Sbjct: 1021 EDSDAEDDMAGPSSG-NRRKRAWSESDEDEPQDQRPESSPVRENSAEVQESDGEIKDDND 1079
Query: 3429 KTNGGDTSDEE 3461
K NG D+E
Sbjct: 1080 KPNGDAAEDDE 1090
>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
sativus]
Length = 1074
Score = 1595 bits (4130), Expect = 0.0
Identities = 821/1078 (76%), Positives = 896/1078 (83%), Gaps = 8/1078 (0%)
Frame = +3
Query: 207 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 386
MA VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1 MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60
Query: 387 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 566
QILEEGSSPEID+YYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61 QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120
Query: 567 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 746
SRIDMHEPSTWVGKGQLLL KGEVEQA AAFKIVLDGDRDNVPALLGQACVEFNRG YS+
Sbjct: 121 SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180
Query: 747 SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 926
SLELYKRALQVYP+CPAAVRLGIGLCRY+L Q+ KAQQAFER LDPENVEALV LAI+
Sbjct: 181 SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFER---LDPENVEALVGLAII 237
Query: 927 DLRTNEASGIMKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 1106
DL TNEA I GM KMQRAFEIYP+CAMALNYLANHFFFTGQHFLVEQLTETALA+TNH
Sbjct: 238 DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 297
Query: 1107 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 1286
GPTKSHS+YNLARSYHSKGDY+KAG+YYMAS KE +KP EFVFPYYGLGQVQ+K+GD RS
Sbjct: 298 GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 357
Query: 1287 ALSNFEKVLEVYPDNCETLKALGYIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 1466
ALSNFEKVLEVYPDNCETLK LG+IYVQLGQ +K Q+ +RKATKIDPRDAQAFL+LGELL
Sbjct: 358 ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 417
Query: 1467 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIW 1646
I +D AALDAFKTA L KKGGQEVPIE+LNN+GVL FER EFELA++ FKEALGDGIW
Sbjct: 418 ISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 477
Query: 1647 LSFINEENKS-SFDASTSTLQFKDMQLFHGLESNGHHVEVPWDKVTVLFNLARLLEQLNK 1823
L FI+ + + + +AS S LQ+KD++LF+ LE G + +PW KVT LFNLARLLEQL++
Sbjct: 478 LDFIDGKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR 537
Query: 1824 SGTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLG 2003
+S+LYRLILFKYPDY+DAYLRLA+IAKARN + LSIELVNDALKVNDKC NALSMLG
Sbjct: 538 IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG 597
Query: 2004 ELELKNDDWVKAKESLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 2183
ELELKNDDWV+AKE+ RAA +ATDGKDSYATLSLGNWNYFAA+RNEKRNPKLEATHLEK+
Sbjct: 598 ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS 657
Query: 2184 KELYTRVLIQHSANLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 2363
KELYTRVL+QH ANLYAANGA V+LAEKG FDVSKDIFTQVQEAASG++FVQMPDVWINL
Sbjct: 658 KELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 717
Query: 2364 AHVYFAQGNFSLAVKMYQNCLRKFYYNTDSQILLYQARTHYEAEQWQDCIKTLLRAIHLA 2543
AHVYFAQGNFSLAVKMYQNCLRKFYYNTD QILLY ART+YEAEQWQDC KTLLRAIHLA
Sbjct: 718 AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLA 777
Query: 2544 PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNLHIHGF 2723
PSNYTLRFDAGVAMQKFSASTLQK KRTADEVR+TVAEL+NAVR+FSQLSAASNLH HGF
Sbjct: 778 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF 837
Query: 2724 DEKKIDTHVGYCNHLLSAAKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFQ 2903
DEKKIDTHVGYC HLL AA VH KFQ
Sbjct: 838 DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQ 897
Query: 2904 MERRKQEDEIKRVQQQEEHFKRVKEQWKSSTHSKRRERS--XXXXXXXXXXXXXXXXXXX 3077
+ERRK EDE KR+ QQE+HFKRVKEQWKS T +KRRERS
Sbjct: 898 LERRKLEDEEKRMMQQEQHFKRVKEQWKSITPAKRRERSEIDDDEAGNSEKRRRKGGKRR 957
Query: 3078 XXXXHSKSHYXXXXXXXXXXXXXXXXXXXXXINYKEEAQTNVN---DDVEENAQGLLAAV 3248
KSHY I+Y+ E+++ VN DD E N Q LA
Sbjct: 958 KKDRKGKSHYETEEADNDMMDDQELYNEDNNISYR-ESRSQVNDQGDDFEGNDQDALAEA 1016
Query: 3249 GLEDSDVDDEMAAPSSTIARRRQALSESDDDEPL--QRQSSPIRENSADMQESDGEIR 3416
GLEDSD +DE APSS ARRR S+S++DEP+ QR+S RENSA +++SDGEIR
Sbjct: 1017 GLEDSDAEDEAGAPSSNAARRRATWSDSEEDEPIDTQRESRLQRENSAGLEDSDGEIR 1074
>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
gi|222833309|gb|EEE71786.1| PAF1 complex component
[Populus trichocarpa]
Length = 1056
Score = 1549 bits (4010), Expect = 0.0
Identities = 800/1057 (75%), Positives = 883/1057 (83%), Gaps = 6/1057 (0%)
Frame = +3
Query: 207 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 386
MA VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK+DQFR
Sbjct: 1 MAFVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFR 60
Query: 387 QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 566
QILEEGSS EID+YYADVRYERIAILNALGAYYSYLGK+ETKQREKEE+FI AT++YNKA
Sbjct: 61 QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKVETKQREKEEYFIQATKHYNKA 120
Query: 567 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 746
SRIDMHEPSTWVGKGQLLLAKGEVEQASAAF+IVL+GDRDNV ALLGQACVE++RG Y +
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFRIVLEGDRDNVSALLGQACVEYSRGHYGE 180
Query: 747 SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 926
SL L+KRALQVYP+CP AVRLGIG C YKLG KA AF+R LDPENVEALV+LAI+
Sbjct: 181 SLTLFKRALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQR---LDPENVEALVSLAIL 237
Query: 927 DLRTNEASGIMKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 1106
DL+TNEA+ I KGM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 238 DLQTNEAAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297
Query: 1107 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 1286
GPTKSHSYYNLARSYHSKGDY+ A YY ASVKEI+KP EFVFPYYGLGQVQ+KLG+ ++
Sbjct: 298 GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGEIKN 357
Query: 1287 ALSNFEKVLEVYPDNCETLKALGYIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 1466
ALSNFEKVLEVYPDNCETLK LG+IYVQLGQT+K Q+F+RKA KIDPRDAQAFL+LGELL
Sbjct: 358 ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELL 417
Query: 1467 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIW 1646
I +DTGAALDAFKTAR+L KKGG+EVPIE+LNNI V+ FER E ELA Q FKEALGDGIW
Sbjct: 418 ISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQNFKEALGDGIW 477
Query: 1647 LSFIN-EENKSSFDASTSTLQFKDMQLFHGLESNGHHVEVPWDKVTVLFNLARLLEQLNK 1823
L+F+ + N DA++S LQ+KDMQ+F LE GH VE+ W+KVT LFNLARLLEQL+
Sbjct: 478 LTFLEGKANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHN 537
Query: 1824 SGTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLG 2003
+ TAS LYRLILFKYPDY+DAYLRLAAIAKARNN+ LSIELVN+AL VNDKCPNALSMLG
Sbjct: 538 TETASTLYRLILFKYPDYVDAYLRLAAIAKARNNLPLSIELVNEALTVNDKCPNALSMLG 597
Query: 2004 ELELKNDDWVKAKESLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 2183
+LELKNDDWVKAKE+ RAAS+ATDGKDSYATLSLGNWNYFAA+RNEKRNPKLEATHLEKA
Sbjct: 598 DLELKNDDWVKAKETFRAASEATDGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKA 657
Query: 2184 KELYTRVLIQHSANLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 2363
KELYTRVL+QH+ANLYAANGA VVLAEKGHFDVSKD+FTQVQEAASGS+FVQMPDVWINL
Sbjct: 658 KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWINL 717
Query: 2364 AHVYFAQGNFSLAVKMYQNCLRKFYYNTDSQILLYQARTHYEAEQWQDCIKTLLRAIHLA 2543
AHVYFAQGNF+LAVKMYQNCL+KF+YNTDSQILLY ARTHYEAEQWQDC +TLLRAIHL
Sbjct: 718 AHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYEAEQWQDCKRTLLRAIHLT 777
Query: 2544 PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNLHIHGF 2723
PSNYTLRFDAGVAMQKFSASTLQK KRT DEVR+TV EL+NAVR+FSQLSAASNL+ +GF
Sbjct: 778 PSNYTLRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSAASNLYFNGF 837
Query: 2724 DEKKIDTHVGYCNHLLSAAKVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFQ 2903
DEKKI+THV YC HLL AA VH KFQ
Sbjct: 838 DEKKINTHVEYCKHLLEAAIVHREAAEREEQQNRQRLDLARQMALAEEARRKAEEQRKFQ 897
Query: 2904 MERRKQEDEIKRVQQQEEHFKRVKEQWKSSTH-SKRRERSXXXXXXXXXXXXXXXXXXXX 3080
+ERRKQEDE+KRV+QQEEHF+RVKEQWKSST SKRR+R+
Sbjct: 898 LERRKQEDELKRVRQQEEHFERVKEQWKSSTSASKRRDRADIDDGEGGHGEKRRRKGGKR 957
Query: 3081 XXXH--SKSHYXXXXXXXXXXXXXXXXXXXXXINYKEEA-QTNVNDD-VEENAQGLLAAV 3248
S+S Y +N++E Q N DD EENAQ +LAA
Sbjct: 958 RKKEKSSRSRY-EMEEADMMDDHDEPEDDDANVNFREPGYQMNDQDDNAEENAQDVLAAA 1016
Query: 3249 GLEDSDVDDEMAAPSSTIARRRQALSESDDDEPLQRQ 3359
GLEDSD DD+ AAPSS RR++A SESD+DE +R+
Sbjct: 1017 GLEDSDADDDAAAPSSA-GRRKRAWSESDEDEISERK 1052