BLASTX nr result

ID: Glycyrrhiza23_contig00008197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008197
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28403.1| Formylmethionine deformylase [Medicago truncatula]     272   5e-71
ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloropla...   270   3e-70
ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus c...   267   1e-69
dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]                         264   2e-68
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...   263   3e-68

>gb|ABD28403.1| Formylmethionine deformylase [Medicago truncatula]
          Length = 257

 Score =  272 bits (696), Expect = 5e-71
 Identities = 144/197 (73%), Positives = 163/197 (82%), Gaps = 9/197 (4%)
 Frame = -1

Query: 675 NLLPNIVKAGDPVLHQRACEVEPSEMKSERVQKIIDDIISVMRNSPGGVGLAAPQIGIPF 496
           N LP IVKAGDPV+H+ A EV+ SE+KS+++Q IIDD+I VMR +PG VG+AAPQIGIP 
Sbjct: 65  NKLPYIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPG-VGVAAPQIGIPL 123

Query: 495 RVIVLEYKGGV--------SKARDSRPFDLLVILNPKLKKKSNRTALFFEGCLSVDGFAA 340
           R+IVLE K           +KA+D RPFDLLVILNPKLK KSNRTA FFEGCLSVD F A
Sbjct: 124 RIIVLEDKEEFICYNTEEETKAQDRRPFDLLVILNPKLKNKSNRTAFFFEGCLSVDRFQA 183

Query: 339 VVERCLDVEVEGFDRYGEPIKISASGWQARILQHECDHLDGTLYVDKLVPRTFRTEKNIN 160
           +VER LDVEV GFDRYGEPIKI+ASGWQARILQHECDHLDGTLYVDK+VPRTFR+ KN++
Sbjct: 184 LVERYLDVEVTGFDRYGEPIKINASGWQARILQHECDHLDGTLYVDKMVPRTFRSWKNVD 243

Query: 159 LPLA-GCPKRAKLGPRA 112
           LPLA GCP   KLGPRA
Sbjct: 244 LPLARGCP---KLGPRA 257


>ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Glycine max]
          Length = 252

 Score =  270 bits (689), Expect = 3e-70
 Identities = 146/201 (72%), Positives = 166/201 (82%), Gaps = 9/201 (4%)
 Frame = -1

Query: 690 NNRRSNLLPNIVKAGDPVLHQRACEVEPSEMKSERVQKIIDDIISVMRNSPGGVGLAAPQ 511
           +++++NL P+ VKAGDPVLH+ A +V+P+E+KSERVQKIIDD+I VMR +PG VGLAAPQ
Sbjct: 57  DSKKTNL-PDTVKAGDPVLHEPAQDVDPNEIKSERVQKIIDDMIQVMRKAPG-VGLAAPQ 114

Query: 510 IGIPFRVIVLE----YKGGVSK----ARDSRPFDLLVILNPKLKKKSNRTALFFEGCLSV 355
           IGIP R+IVLE    Y   VSK     +D RPFDLLVILNPKL+KK  RTALFFEGCLSV
Sbjct: 115 IGIPLRIIVLEDTKEYISYVSKEEAKTQDRRPFDLLVILNPKLEKKGKRTALFFEGCLSV 174

Query: 354 DGFAAVVERCLDVEVEGFDRYGEPIKISASGWQARILQHECDHLDGTLYVDKLVPRTFRT 175
           DGF AVVER LDVEV G DRYG PIKI ASGWQARILQHECDHLDGTLYVDK++PRTFRT
Sbjct: 175 DGFRAVVERHLDVEVTGLDRYGAPIKIIASGWQARILQHECDHLDGTLYVDKMLPRTFRT 234

Query: 174 EKNINLPLA-GCPKRAKLGPR 115
             N++LPLA GCP   KLGPR
Sbjct: 235 VDNMDLPLAQGCP---KLGPR 252


>ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223543236|gb|EEF44768.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 266

 Score =  267 bits (683), Expect = 1e-69
 Identities = 138/186 (74%), Positives = 156/186 (83%), Gaps = 9/186 (4%)
 Frame = -1

Query: 669 LPNIVKAGDPVLHQRACEVEPSEMKSERVQKIIDDIISVMRNSPGGVGLAAPQIGIPFRV 490
           LP+IVKAGDPVLH+ A EV+P E+ SER+QKIIDD++ VMR +PG VGLAAPQIG+P R+
Sbjct: 77  LPDIVKAGDPVLHEPAREVDPDEIGSERIQKIIDDMVKVMRRAPG-VGLAAPQIGVPLRI 135

Query: 489 IVLE----YKGGV----SKARDSRPFDLLVILNPKLKKKSNRTALFFEGCLSVDGFAAVV 334
           IVLE    Y G      +KA+D RPFDLLVILNPKLKKK NRTALFFEGCLSVDGF AVV
Sbjct: 136 IVLEDTTEYIGYAPKEETKAQDRRPFDLLVILNPKLKKKGNRTALFFEGCLSVDGFRAVV 195

Query: 333 ERCLDVEVEGFDRYGEPIKISASGWQARILQHECDHLDGTLYVDKLVPRTFRTEKNINLP 154
           ER L+VEV G DR G+PIK+ ASGWQARILQHECDHLDGTLYVDK+VPRTFRT  N++LP
Sbjct: 196 ERSLEVEVSGLDRSGQPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTVDNLDLP 255

Query: 153 LA-GCP 139
           LA GCP
Sbjct: 256 LAEGCP 261


>dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
          Length = 274

 Score =  264 bits (674), Expect = 2e-68
 Identities = 135/191 (70%), Positives = 156/191 (81%), Gaps = 9/191 (4%)
 Frame = -1

Query: 684 RRSNLLPNIVKAGDPVLHQRACEVEPSEMKSERVQKIIDDIISVMRNSPGGVGLAAPQIG 505
           ++    P+IVKAGDPVLH+ A EV+P E+ SER+QKIIDD+I  MR +PG VGLAAPQIG
Sbjct: 80  KKKTSFPDIVKAGDPVLHEPAREVDPEEIGSERIQKIIDDMIKAMRMAPG-VGLAAPQIG 138

Query: 504 IPFRVIVLEYKGGV--------SKARDSRPFDLLVILNPKLKKKSNRTALFFEGCLSVDG 349
           +P R+IVLE             +KA+D RPFDLLVILNPKL+KKSNRTA FFEGCLSVDG
Sbjct: 139 VPLRIIVLEDTKEYIRYAPKEETKAQDRRPFDLLVILNPKLEKKSNRTAFFFEGCLSVDG 198

Query: 348 FAAVVERCLDVEVEGFDRYGEPIKISASGWQARILQHECDHLDGTLYVDKLVPRTFRTEK 169
           F AVVER LDVEV G  RYG+PIK++ASGWQARILQHECDHLDGTLYVDK+VPRTFRT +
Sbjct: 199 FRAVVERYLDVEVTGLSRYGQPIKVNASGWQARILQHECDHLDGTLYVDKMVPRTFRTIE 258

Query: 168 NINLPLA-GCP 139
           N++LPLA GCP
Sbjct: 259 NLDLPLAEGCP 269


>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score =  263 bits (672), Expect = 3e-68
 Identities = 139/187 (74%), Positives = 155/187 (82%), Gaps = 9/187 (4%)
 Frame = -1

Query: 669 LPNIVKAGDPVLHQRACEVEPSEMKSERVQKIIDDIISVMRNSPGGVGLAAPQIGIPFRV 490
           LP+IVKAGDPVLH+ A EV+P E+ SE+VQKIIDD+I  MR +PG VGLAAPQIGIP R+
Sbjct: 78  LPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKAPG-VGLAAPQIGIPLRI 136

Query: 489 IVLE-YKGGVS-------KARDSRPFDLLVILNPKLKKKSNRTALFFEGCLSVDGFAAVV 334
           IVLE  K  +S       KA+D R FDLLVI+NPKLK KSN+TALFFEGCLSVDGF AVV
Sbjct: 137 IVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVV 196

Query: 333 ERCLDVEVEGFDRYGEPIKISASGWQARILQHECDHLDGTLYVDKLVPRTFRTEKNINLP 154
           ER LDVEV GFDR G PIK+ ASGWQARILQHECDHLDGTLYVDK+VPRTFRT +N+ LP
Sbjct: 197 ERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTTENLTLP 256

Query: 153 LA-GCPK 136
           LA GCPK
Sbjct: 257 LAEGCPK 263


Top