BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008146
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45241.1| unknown [Lotus japonicus]                               79   1e-12
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    70   2e-10
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               69   8e-10
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    69   8e-10
gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]                68   2e-09

>gb|AFK45241.1| unknown [Lotus japonicus]
          Length = 165

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 38/104 (36%), Positives = 58/104 (55%)
 Frame = +1

Query: 343 RDYTSGFWFAFSCNLGDCTVLTAELWAILYGVRFA*AKGCSNILIESNSHLVVRLLEKGC 522
           RD+   F   F+  +G C++L AELW +++G+RF   +G S ILIE++S   +  L KGC
Sbjct: 59  RDHHGNFLLGFTMKVGVCSILHAELWGLVHGLRFVLGRGFSKILIEADSAGTIEFLNKGC 118

Query: 523 STRYPCHVLAHQIMQYIREVSTIQISHVLHEANQVANHLARHGL 654
              +PC  L  +    + +   I   HV  E N VA+  A++GL
Sbjct: 119 PVVHPCFPLVREFHHLVGQNCYIHWKHVYREVNFVADSFAKNGL 162


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 69.7 bits (169), Expect(2) = 2e-10
 Identities = 36/114 (31%), Positives = 61/114 (53%)
 Frame = +1

Query: 337 ILRDYTSGFWFAFSCNLGDCTVLTAELWAILYGVRFA*AKGCSNILIESNSHLVVRLLEK 516
           +LRD+   +   F+ N+G C+   AELW + YG+  A  +G   + +E +S +VV  L  
Sbjct: 181 VLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYGLFIAWGRGARRVELEVDSKMVVGFLTT 240

Query: 517 GCSTRYPCHVLAHQIMQYIREVSTIQISHVLHEANQVANHLARHGLLLEVRLSL 678
           G +  +P   L      ++ +   ++ISHV  EAN++A+ LA +   L + L L
Sbjct: 241 GIADSHPLSFLLRLCYDFLSKGWIVRISHVYREANRLADGLANYAFSLSLGLHL 294



 Score = 21.6 bits (44), Expect(2) = 2e-10
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 251 SMEAPPYGYVKLNCDGS 301
           S  +P  G+VKLN DG+
Sbjct: 152 SWVSPEDGWVKLNTDGA 168


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 36/110 (32%), Positives = 60/110 (54%)
 Frame = +1

Query: 337 ILRDYTSGFWFAFSCNLGDCTVLTAELWAILYGVRFA*AKGCSNILIESNSHLVVRLLEK 516
           +LRD T  +   FS N+G C+   AELW + YG+ FA  K    + +E +S ++V  L+ 
Sbjct: 589 VLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKT 648

Query: 517 GCSTRYPCHVLAHQIMQYIREVSTIQISHVLHEANQVANHLARHGLLLEV 666
           G S  +P   L      ++++   ++I HV  EAN++A+ LA +   L +
Sbjct: 649 GISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLANYAFSLSL 698


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 36/110 (32%), Positives = 60/110 (54%)
 Frame = +1

Query: 337 ILRDYTSGFWFAFSCNLGDCTVLTAELWAILYGVRFA*AKGCSNILIESNSHLVVRLLEK 516
           +LRD T  +   FS N+G C+   AELW + YG+ FA  K    + +E +S ++V  L+ 
Sbjct: 480 VLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKT 539

Query: 517 GCSTRYPCHVLAHQIMQYIREVSTIQISHVLHEANQVANHLARHGLLLEV 666
           G S  +P   L      ++++   ++I HV  EAN++A+ LA +   L +
Sbjct: 540 GISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLANYAFSLSL 589


>gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]
          Length = 253

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 35/115 (30%), Positives = 60/115 (52%)
 Frame = +1

Query: 337 ILRDYTSGFWFAFSCNLGDCTVLTAELWAILYGVRFA*AKGCSNILIESNSHLVVRLLEK 516
           ++RD    + + FS N+G C+   AELW   YG+  A  +G + + +E +S +VV  L  
Sbjct: 113 VVRDGDGNWCYGFSLNIGICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRT 172

Query: 517 GCSTRYPCHVLAHQIMQYIREVSTIQISHVLHEANQVANHLARHGLLLEVRLSLY 681
           G    +P   L       + +  +++ISHV  EAN++A+ LA +   L +   L+
Sbjct: 173 GIDDSHPLSFLVRLCHGLLSKDWSVRISHVYREANRLADGLANYAFFLPLGFHLF 227