BLASTX nr result
ID: Glycyrrhiza23_contig00008107
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00008107 (959 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containin... 338 1e-90 ref|XP_003629342.1| Zinc finger CCCH domain-containing protein [... 320 4e-85 ref|XP_002310301.1| predicted protein [Populus trichocarpa] gi|2... 208 1e-51 ref|XP_002327763.1| predicted protein [Populus trichocarpa] gi|2... 208 2e-51 emb|CBI17393.3| unnamed protein product [Vitis vinifera] 189 8e-46 >ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Glycine max] Length = 520 Score = 338 bits (867), Expect = 1e-90 Identities = 179/261 (68%), Positives = 198/261 (75%), Gaps = 5/261 (1%) Frame = +3 Query: 189 MKRARKSNRVSWATGGNLCQVKLFLSEDYPSKVGQKSQDHLQAKTSSLSHSSTNECIDLP 368 MKRARKSNRVSWATG NLCQVKLFLSED+PS VGQKSQDHLQAKTSS+ HSS NE DLP Sbjct: 1 MKRARKSNRVSWATGDNLCQVKLFLSEDFPSIVGQKSQDHLQAKTSSMLHSSINEPNDLP 60 Query: 369 PGFESSHFLNQSKVEFSHISRIKWECPPLFVFRSRWQVAAGEESREKEDQKLREMRVLEA 548 PGFESSHFLNQ KVEFS+I +IKWECPP+ V RS+W+VAAGEESREKE+QKLREMRVLEA Sbjct: 61 PGFESSHFLNQPKVEFSNIPQIKWECPPVVVVRSQWRVAAGEESREKENQKLREMRVLEA 120 Query: 549 VYPRLSAXXXXXXXXLDVEEEDYDDNITPLXXXXXXXXXXTMDILPELAVAANPHPNVQS 728 +YPRLSA LDVEEEDYDD TPL + DILPELAVA P PNVQS Sbjct: 121 LYPRLSAIPPSPSVSLDVEEEDYDDGRTPLIPIIPIEEEESTDILPELAVALKPSPNVQS 180 Query: 729 Q-----ISATTPISSDCNTSRPVSSDACLMPLAGVSPGSEADLXXXXXXXXXIMKSNEQG 893 Q ISA T ISS N + VS D C+ P+AGVS G EADL I++SNEQG Sbjct: 181 QNSQQYISAKTSISSASNAAHAVSLDPCIRPMAGVSSGMEADLAAASSVVATIIRSNEQG 240 Query: 894 SLIDMDLLVKIFNDPNMIEKL 956 +LIDMDLL KIF DP ++E+L Sbjct: 241 TLIDMDLLGKIFTDPKILEQL 261 >ref|XP_003629342.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|355523364|gb|AET03818.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] Length = 594 Score = 320 bits (819), Expect = 4e-85 Identities = 175/261 (67%), Positives = 187/261 (71%), Gaps = 5/261 (1%) Frame = +3 Query: 189 MKRARKSNRVSWATGGNLCQVKLFLSEDYPSKVGQKSQDHLQAKTSSLSHSSTNECIDLP 368 MKRARKSNRVSWA+ NLCQVKLFLSEDYPSKVG QD L+AK SS+ STNE IDLP Sbjct: 2 MKRARKSNRVSWASPANLCQVKLFLSEDYPSKVGLNLQDSLEAKASSMLCYSTNESIDLP 61 Query: 369 PGFESSHFLNQSKVEFSHISRIKWECPPLFVFRSRWQVAAGEESREKEDQKLREMRVLEA 548 PGFES HF NQSKV+FSHI +IKWECP FVF W VAAG+ESREKE QKLRE+RVLEA Sbjct: 62 PGFESGHFPNQSKVQFSHIPKIKWECPLSFVFSPNWLVAAGQESREKEVQKLREIRVLEA 121 Query: 549 VYPRLSAXXXXXXXXLDVEEEDYDDNITPLXXXXXXXXXXTMDILPELAVAANPHPNVQS 728 VYPR SA LDVEEE+YDDN TPL +M LPELA A N HPNVQ Sbjct: 122 VYPRPSAIPPSPSVSLDVEEEEYDDNSTPLIPIIPIEEEESMTNLPELAAAVNTHPNVQP 181 Query: 729 Q-----ISATTPISSDCNTSRPVSSDACLMPLAGVSPGSEADLXXXXXXXXXIMKSNEQG 893 Q +SATT ISSD N+SR VSSDA LMPLAGVS EAD I+KSNEQ Sbjct: 182 QNLHQHMSATTSISSDRNSSRTVSSDARLMPLAGVSSSLEADAAAASEVVAAILKSNEQA 241 Query: 894 SLIDMDLLVKIFNDPNMIEKL 956 LIDMDLLVKI NDP MIE L Sbjct: 242 GLIDMDLLVKILNDPKMIENL 262 >ref|XP_002310301.1| predicted protein [Populus trichocarpa] gi|222853204|gb|EEE90751.1| predicted protein [Populus trichocarpa] Length = 557 Score = 208 bits (530), Expect = 1e-51 Identities = 130/271 (47%), Positives = 156/271 (57%), Gaps = 15/271 (5%) Frame = +3 Query: 189 MKRARKSNRVSWATGGNLCQVKLFLSEDYPSKVGQKSQDHLQAKTSSLSH-SSTNECIDL 365 MKR+RKSNRVSWA G LCQV+LFLSED PS+VG + +D LQ S L SS+ + DL Sbjct: 1 MKRSRKSNRVSWAPGLYLCQVRLFLSEDCPSEVGGQVRDLLQKNASRLLPISSSKDSNDL 60 Query: 366 PPGFESSHFLNQSKVEFSHISRIKWECPPLFVFRSRWQVAAGEESREKEDQKLREMRVLE 545 PPGFE +HFLN E S I R++W+CPP FV W V GEES+E E QKLREMRVLE Sbjct: 61 PPGFEGTHFLNPCIKELSCIPRVQWKCPPNFVVNYNWHVTDGEESQESEAQKLREMRVLE 120 Query: 546 AVYPRLSAXXXXXXXXLDVEEEDYDDNITPLXXXXXXXXXXTMDILPELAVAANPHPNVQ 725 AVYPR S+ LDVEEE+YDD++TP+ ++ P L P N Sbjct: 121 AVYPRPSSVPPSPAVSLDVEEENYDDSLTPIIPLIPVEEEEAAEMPPAL---TEPLKNPT 177 Query: 726 SQISATTP---------ISSDCNT---SRPVSSDACL--MPLAGVSPGSEADLXXXXXXX 863 + +S P SS CNT + P S L +P G P + A Sbjct: 178 TSLSPALPPVLLSSGILNSSKCNTPALNPPASQKPELGRLPDPGTHPITAAS-----AAV 232 Query: 864 XXIMKSNEQGSLIDMDLLVKIFNDPNMIEKL 956 IMKS EQG LID DLLVKIF DP M++KL Sbjct: 233 TAIMKSKEQGGLIDTDLLVKIFRDPKMVDKL 263 >ref|XP_002327763.1| predicted protein [Populus trichocarpa] gi|222836848|gb|EEE75241.1| predicted protein [Populus trichocarpa] Length = 536 Score = 208 bits (529), Expect = 2e-51 Identities = 127/273 (46%), Positives = 152/273 (55%), Gaps = 16/273 (5%) Frame = +3 Query: 189 MKRARKSNRVSWATGGNLCQVKLFLSEDYPSKVGQKSQDHLQAKTSSLS-HSSTNECIDL 365 MKR+ KSNRVSWA G NLCQ +LF+SED PSKVG + QDHLQ KTS L HSS E D Sbjct: 1 MKRSSKSNRVSWAPGLNLCQERLFVSEDCPSKVGGQVQDHLQKKTSLLLLHSSGKEPNDF 60 Query: 366 PPGFESSHFLNQSKVEFSHISRIKWECPPLFVFRSRWQVAAGEESREKEDQKLREMRVLE 545 PPGFE SHFLN K E S RI+W+CPP FV S W V AGEES+E + QKLREMR LE Sbjct: 61 PPGFEGSHFLNPCKKELSCFPRIQWKCPPKFVVSSNWHVTAGEESQESQAQKLREMRALE 120 Query: 546 AVYPRLSAXXXXXXXXLDVEEEDYDDNITPLXXXXXXXXXXTMDILPELAVAANPHPNVQ 725 A YPR SA LDVE+ DYDD++TP+ ++ +L P Sbjct: 121 AFYPRPSAVPPSPVVSLDVEDTDYDDSLTPIIPLIPVEEEEATELPSDLT-----EPLKT 175 Query: 726 SQISATTPISSDCNTSRPVSSDACLMPLAG---------------VSPGSEADLXXXXXX 860 SQ A P T ++S C+ P + +PGS + Sbjct: 176 SQSPALPPFLLSFGT---LNSSKCITPASNPLLSEKTAFGKLPNPPNPGSNL-ISAASAA 231 Query: 861 XXXIMKSNEQGSLIDMDLLVKIFNDPNMIEKLS 959 IMK+ GSLID LLVKI +DP MIE+L+ Sbjct: 232 VTAIMKNKGHGSLIDTGLLVKILSDPKMIEELA 264 >emb|CBI17393.3| unnamed protein product [Vitis vinifera] Length = 449 Score = 189 bits (480), Expect = 8e-46 Identities = 118/262 (45%), Positives = 149/262 (56%), Gaps = 6/262 (2%) Frame = +3 Query: 189 MKRARKSNRVSWATGGNLCQVKLFLSEDYPSKVGQKSQDHLQAKTSSLSHSSTNECIDLP 368 MK ++ S +VSWA NLCQ KLF S+D PS+V K++D L AK S + HS + LP Sbjct: 1 MKLSKSSKKVSWAPDANLCQAKLFRSKDCPSQVCLKARDGLLAKKSWILHSDGRDTNGLP 60 Query: 369 PGFESSHFLNQSKVEFSHISRIKWECPPLFVFRSRWQVAAGEESREKEDQKLREMRVLEA 548 GF+ + +NQSK + SHI +IKW+CPP FV S W VA+GEES+E E QKLRE V+EA Sbjct: 61 HGFKDTR-VNQSKKKVSHIPKIKWKCPPKFVLSSNWLVASGEESQEAEAQKLRENHVVEA 119 Query: 549 VYPRLSAXXXXXXXXLDVEEEDYDDNITPLXXXXXXXXXXTMDILPELAVAAN----PHP 716 VYPR+SA LD+EE DD PL T+D L +LA N P Sbjct: 120 VYPRISAIPLSPSISLDIEECHQDDCDIPLVPITSMEDEGTVDTLFDLAAPINSSMISKP 179 Query: 717 NVQSQISATTPISSDCNTSRPVSSDACLMPLA-GVSPGSEAD-LXXXXXXXXXIMKSNEQ 890 SQ + +S CN RPV + A G+SP EAD + +M+ EQ Sbjct: 180 PALSQDLLASGNTSQCN--RPVLEPPAIEKTALGLSPDVEADIIAAATAAITMVMRCKEQ 237 Query: 891 GSLIDMDLLVKIFNDPNMIEKL 956 GSLID DLL+KI +P M EKL Sbjct: 238 GSLIDTDLLIKILTNPKMTEKL 259