BLASTX nr result

ID: Glycyrrhiza23_contig00008105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008105
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521331.1| PREDICTED: 26S proteasome regulatory subunit...   135   4e-30
ref|XP_003554317.1| PREDICTED: 26S proteasome regulatory subunit...   135   4e-30
dbj|BAJ79010.1| regulatory particle triple-A ATPase 2 [Sophora f...   133   1e-29
ref|XP_002301829.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|XP_002320617.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28

>ref|XP_003521331.1| PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like
           [Glycine max]
          Length = 446

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/84 (79%), Positives = 69/84 (82%)
 Frame = +3

Query: 60  MGQGTPGGLNRQGLPGDRKQDGSDXXXXXXXXXXXXXRVGRKQRKQKGPDAAARLPTVTP 239
           MGQGTPGGLNRQGLPGDRK DG D             RVGRKQRKQKGP+AAARLPTVTP
Sbjct: 1   MGQGTPGGLNRQGLPGDRKPDGGDKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTP 60

Query: 240 LTKCKLRLLKLERIKDYLLMEEEF 311
           L+KCKLRLLKLERIKDYLLMEEEF
Sbjct: 61  LSKCKLRLLKLERIKDYLLMEEEF 84


>ref|XP_003554317.1| PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like
           [Glycine max]
          Length = 446

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/84 (79%), Positives = 69/84 (82%)
 Frame = +3

Query: 60  MGQGTPGGLNRQGLPGDRKQDGSDXXXXXXXXXXXXXRVGRKQRKQKGPDAAARLPTVTP 239
           MGQGTPGGLNRQGLPGDRK DG D             RVGRKQRKQKGP+AAARLPTVTP
Sbjct: 1   MGQGTPGGLNRQGLPGDRKPDGGDKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTP 60

Query: 240 LTKCKLRLLKLERIKDYLLMEEEF 311
           L+KCKLRLLKLERIKDYLLMEEEF
Sbjct: 61  LSKCKLRLLKLERIKDYLLMEEEF 84


>dbj|BAJ79010.1| regulatory particle triple-A ATPase 2 [Sophora flavescens]
          Length = 446

 Score =  133 bits (335), Expect = 1e-29
 Identities = 66/84 (78%), Positives = 69/84 (82%)
 Frame = +3

Query: 60  MGQGTPGGLNRQGLPGDRKQDGSDXXXXXXXXXXXXXRVGRKQRKQKGPDAAARLPTVTP 239
           MGQG+PGGLNRQGLPGDRK DG D             RVGRKQRKQKGP+AAARLPTVTP
Sbjct: 1   MGQGSPGGLNRQGLPGDRKPDGGDKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTP 60

Query: 240 LTKCKLRLLKLERIKDYLLMEEEF 311
           L+KCKLRLLKLERIKDYLLMEEEF
Sbjct: 61  LSKCKLRLLKLERIKDYLLMEEEF 84


>ref|XP_002301829.1| predicted protein [Populus trichocarpa] gi|222843555|gb|EEE81102.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/84 (78%), Positives = 68/84 (80%)
 Frame = +3

Query: 60  MGQGTPGGLNRQGLPGDRKQDGSDXXXXXXXXXXXXXRVGRKQRKQKGPDAAARLPTVTP 239
           MGQG  GGLNRQGLPGDRKQDGSD             RVGRKQRKQKGP+AAARLPTVTP
Sbjct: 1   MGQGPSGGLNRQGLPGDRKQDGSDKKDKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTP 60

Query: 240 LTKCKLRLLKLERIKDYLLMEEEF 311
            TKCKLRLLK+ERIKDYLLMEEEF
Sbjct: 61  HTKCKLRLLKMERIKDYLLMEEEF 84


>ref|XP_002320617.1| predicted protein [Populus trichocarpa] gi|222861390|gb|EEE98932.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  128 bits (321), Expect = 5e-28
 Identities = 67/84 (79%), Positives = 68/84 (80%)
 Frame = +3

Query: 60  MGQGTPGGLNRQGLPGDRKQDGSDXXXXXXXXXXXXXRVGRKQRKQKGPDAAARLPTVTP 239
           MGQG  GGLNRQ LPGDRKQDGSD             RVGRKQRKQKGP+AAARLPTVTP
Sbjct: 1   MGQGPSGGLNRQ-LPGDRKQDGSDKKDKKFEPAAPPVRVGRKQRKQKGPEAAARLPTVTP 59

Query: 240 LTKCKLRLLKLERIKDYLLMEEEF 311
           LTKCKLRLLKLERIKDYLLMEEEF
Sbjct: 60  LTKCKLRLLKLERIKDYLLMEEEF 83


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