BLASTX nr result

ID: Glycyrrhiza23_contig00008087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008087
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140575.1| PREDICTED: 60S ribosomal protein L23-like [C...   160   8e-38
gb|AAB70426.1| Strong similarity to 60S ribosomal protein L17 (g...   160   8e-38
ref|NP_180895.1| 60S ribosomal protein L23 [Arabidopsis thaliana...   160   8e-38
ref|NP_001235125.1| uncharacterized protein LOC100306699 [Glycin...   160   8e-38
gb|ABY56104.1| ribosomal protein [Cucumis sativus]                    160   8e-38

>ref|XP_004140575.1| PREDICTED: 60S ribosomal protein L23-like [Cucumis sativus]
           gi|449458864|ref|XP_004147166.1| PREDICTED: 60S
           ribosomal protein L23-like [Cucumis sativus]
           gi|449487355|ref|XP_004157585.1| PREDICTED: 60S
           ribosomal protein L23-like [Cucumis sativus]
           gi|449498587|ref|XP_004160577.1| PREDICTED: 60S
           ribosomal protein L23-like [Cucumis sativus]
           gi|449526191|ref|XP_004170097.1| PREDICTED: 60S
           ribosomal protein L23-like [Cucumis sativus]
          Length = 140

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 3   FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 182
           FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR
Sbjct: 14  FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 73

Query: 183 KKVLPAVIVRQRKPWRRKD 239
           KKVLPAVIVRQRKPWRRKD
Sbjct: 74  KKVLPAVIVRQRKPWRRKD 92


>gb|AAB70426.1| Strong similarity to 60S ribosomal protein L17 (gb|X01694). EST
           gb|AA042332 comes from this gene [Arabidopsis thaliana]
          Length = 157

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 3   FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 182
           FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR
Sbjct: 31  FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 90

Query: 183 KKVLPAVIVRQRKPWRRKD 239
           KKVLPAVIVRQRKPWRRKD
Sbjct: 91  KKVLPAVIVRQRKPWRRKD 109


>ref|NP_180895.1| 60S ribosomal protein L23 [Arabidopsis thaliana]
           gi|15229287|ref|NP_187090.1| 60S ribosomal protein L23
           [Arabidopsis thaliana] gi|18390397|ref|NP_563707.1| 60S
           ribosomal protein L23 [Arabidopsis thaliana]
           gi|297826791|ref|XP_002881278.1| 60S ribosomal protein
           L23 [Arabidopsis lyrata subsp. lyrata]
           gi|297828934|ref|XP_002882349.1| 60S ribosomal protein
           L23 [Arabidopsis lyrata subsp. lyrata]
           gi|297843256|ref|XP_002889509.1| 60S ribosomal protein
           L23 [Arabidopsis lyrata subsp. lyrata]
           gi|19884121|sp|P49690.3|RL23_ARATH RecName: Full=60S
           ribosomal protein L23; AltName: Full=Protein EMBRYO
           DEFECTIVE 2171 gi|2459420|gb|AAB80655.1| 60S ribosomal
           protein L23 [Arabidopsis thaliana]
           gi|7547099|gb|AAF63771.1| ribosomal protein L17,
           putative [Arabidopsis thaliana]
           gi|14596111|gb|AAK68783.1| 60S ribosomal protein L17
           [Arabidopsis thaliana] gi|15450856|gb|AAK96699.1| Strong
           similarity to 60S ribosomal protein L17 [Arabidopsis
           thaliana] gi|18377460|gb|AAL66896.1| unknown protein
           [Arabidopsis thaliana] gi|20148697|gb|AAM10239.1|
           similar to 60S ribosomal protein L17 [Arabidopsis
           thaliana] gi|21555625|gb|AAM63901.1| putative 60S
           ribosomal protein L17 [Arabidopsis thaliana]
           gi|21593801|gb|AAM65768.1| putative 60S ribosomal
           protein L17 [Arabidopsis thaliana]
           gi|98961079|gb|ABF59023.1| At2g33370 [Arabidopsis
           thaliana] gi|297327117|gb|EFH57537.1| 60S ribosomal
           protein L23 [Arabidopsis lyrata subsp. lyrata]
           gi|297328189|gb|EFH58608.1| 60S ribosomal protein L23
           [Arabidopsis lyrata subsp. lyrata]
           gi|297335351|gb|EFH65768.1| 60S ribosomal protein L23
           [Arabidopsis lyrata subsp. lyrata]
           gi|330253730|gb|AEC08824.1| 60S ribosomal protein L23
           [Arabidopsis thaliana] gi|332189581|gb|AEE27702.1| 60S
           ribosomal protein L23 [Arabidopsis thaliana]
           gi|332640555|gb|AEE74076.1| 60S ribosomal protein L23
           [Arabidopsis thaliana]
          Length = 140

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 3   FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 182
           FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR
Sbjct: 14  FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 73

Query: 183 KKVLPAVIVRQRKPWRRKD 239
           KKVLPAVIVRQRKPWRRKD
Sbjct: 74  KKVLPAVIVRQRKPWRRKD 92


>ref|NP_001235125.1| uncharacterized protein LOC100306699 [Glycine max]
           gi|356505056|ref|XP_003521308.1| PREDICTED: 60S
           ribosomal protein L23-like [Glycine max]
           gi|356548091|ref|XP_003542437.1| PREDICTED: 60S
           ribosomal protein L23-like isoform 1 [Glycine max]
           gi|356548093|ref|XP_003542438.1| PREDICTED: 60S
           ribosomal protein L23-like isoform 2 [Glycine max]
           gi|356572286|ref|XP_003554300.1| PREDICTED: 60S
           ribosomal protein L23-like [Glycine max]
           gi|255629315|gb|ACU15002.1| unknown [Glycine max]
          Length = 140

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 3   FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 182
           FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR
Sbjct: 14  FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 73

Query: 183 KKVLPAVIVRQRKPWRRKD 239
           KKVLPAVIVRQRKPWRRKD
Sbjct: 74  KKVLPAVIVRQRKPWRRKD 92


>gb|ABY56104.1| ribosomal protein [Cucumis sativus]
          Length = 161

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 3   FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 182
           FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR
Sbjct: 35  FRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLR 94

Query: 183 KKVLPAVIVRQRKPWRRKD 239
           KKVLPAVIVRQRKPWRRKD
Sbjct: 95  KKVLPAVIVRQRKPWRRKD 113


Top