BLASTX nr result

ID: Glycyrrhiza23_contig00008046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008046
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containi...    79   4e-13
ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containi...    61   8e-08
ref|XP_002531339.1| pentatricopeptide repeat-containing protein,...    60   2e-07
gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocar...    57   2e-06
ref|XP_002305565.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/59 (64%), Positives = 45/59 (76%)
 Frame = -2

Query: 240 SASTSTTNHPLPPNFSPSQLLDLLRRQTSESSTLQILQWASTQPNFSPNQAQWASIFHE 64
           S+STS T+HPLPP+FSPSQLLDLLRRQ   SS L + QWAS QPN+S +     S+FHE
Sbjct: 43  SSSTSATHHPLPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAH----PSVFHE 97


>ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
           gi|449525343|ref|XP_004169677.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/59 (45%), Positives = 39/59 (66%)
 Frame = -2

Query: 240 SASTSTTNHPLPPNFSPSQLLDLLRRQTSESSTLQILQWASTQPNFSPNQAQWASIFHE 64
           S S+S   H LPP+F+P QL++ LRRQT E + L++  WAS QPNF P+ + +  I  +
Sbjct: 48  STSSSHIVHHLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRK 106


>ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529061|gb|EEF31046.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 630

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = -2

Query: 237 ASTSTTNHPLPPNFSPSQLLDLLRRQTSESSTLQILQWASTQPNFSPNQAQWASIFHE 64
           AST      L  NF+P+QLLD LRRQ  E++ L++L WAS QPNF PN + +  I  +
Sbjct: 39  ASTQQHTATLSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRK 96


>gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocarpus longan]
          Length = 763

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = -2

Query: 234 STSTTNHPLPPNFSPSQLLDLLRRQTSESSTLQILQWASTQPNFSP 97
           S S +++ LPPNF+ SQ LD +RRQ  E+S L++  WAS QPN++P
Sbjct: 47  SVSASSYQLPPNFTSSQHLDTIRRQHDETSALRLFSWASKQPNYTP 92


>ref|XP_002305565.1| predicted protein [Populus trichocarpa] gi|222848529|gb|EEE86076.1|
           predicted protein [Populus trichocarpa]
          Length = 757

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
 Frame = -2

Query: 231 TSTTNHP--LPPNFSPSQLLDLLRRQTSESSTLQILQWASTQPNFSPNQAQWASIFHE 64
           T+TTN    L PNF+P+QLL  LRR+   S+ + +  WAS QPNF P+ + +  + H+
Sbjct: 41  TTTTNSATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHK 98


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