BLASTX nr result
ID: Glycyrrhiza23_contig00008046
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00008046 (244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containi... 79 4e-13 ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containi... 61 8e-08 ref|XP_002531339.1| pentatricopeptide repeat-containing protein,... 60 2e-07 gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocar... 57 2e-06 ref|XP_002305565.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 >ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like [Glycine max] Length = 756 Score = 79.0 bits (193), Expect = 4e-13 Identities = 38/59 (64%), Positives = 45/59 (76%) Frame = -2 Query: 240 SASTSTTNHPLPPNFSPSQLLDLLRRQTSESSTLQILQWASTQPNFSPNQAQWASIFHE 64 S+STS T+HPLPP+FSPSQLLDLLRRQ SS L + QWAS QPN+S + S+FHE Sbjct: 43 SSSTSATHHPLPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAH----PSVFHE 97 >ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like [Cucumis sativus] gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like [Cucumis sativus] Length = 768 Score = 61.2 bits (147), Expect = 8e-08 Identities = 27/59 (45%), Positives = 39/59 (66%) Frame = -2 Query: 240 SASTSTTNHPLPPNFSPSQLLDLLRRQTSESSTLQILQWASTQPNFSPNQAQWASIFHE 64 S S+S H LPP+F+P QL++ LRRQT E + L++ WAS QPNF P+ + + I + Sbjct: 48 STSSSHIVHHLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRK 106 >ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 630 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/58 (48%), Positives = 37/58 (63%) Frame = -2 Query: 237 ASTSTTNHPLPPNFSPSQLLDLLRRQTSESSTLQILQWASTQPNFSPNQAQWASIFHE 64 AST L NF+P+QLLD LRRQ E++ L++L WAS QPNF PN + + I + Sbjct: 39 ASTQQHTATLSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRK 96 >gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocarpus longan] Length = 763 Score = 56.6 bits (135), Expect = 2e-06 Identities = 24/46 (52%), Positives = 34/46 (73%) Frame = -2 Query: 234 STSTTNHPLPPNFSPSQLLDLLRRQTSESSTLQILQWASTQPNFSP 97 S S +++ LPPNF+ SQ LD +RRQ E+S L++ WAS QPN++P Sbjct: 47 SVSASSYQLPPNFTSSQHLDTIRRQHDETSALRLFSWASKQPNYTP 92 >ref|XP_002305565.1| predicted protein [Populus trichocarpa] gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa] Length = 757 Score = 55.1 bits (131), Expect = 6e-06 Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Frame = -2 Query: 231 TSTTNHP--LPPNFSPSQLLDLLRRQTSESSTLQILQWASTQPNFSPNQAQWASIFHE 64 T+TTN L PNF+P+QLL LRR+ S+ + + WAS QPNF P+ + + + H+ Sbjct: 41 TTTTNSATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHK 98