BLASTX nr result

ID: Glycyrrhiza23_contig00008030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008030
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43300.1| unknown [Lotus japonicus]                              288   2e-75
ref|NP_001236425.1| uncharacterized protein LOC100306024 [Glycin...   267   4e-69
ref|XP_003629898.1| Cold acclimation protein COR413-TM1 [Medicag...   253   6e-65
gb|AFK38436.1| unknown [Medicago truncatula]                          252   2e-64
ref|XP_002273366.1| PREDICTED: uncharacterized protein LOC100265...   223   6e-56

>gb|AFK43300.1| unknown [Lotus japonicus]
          Length = 236

 Score =  288 bits (738), Expect = 2e-75
 Identities = 154/233 (66%), Positives = 179/233 (76%), Gaps = 9/233 (3%)
 Frame = +3

Query: 219 SACVSSTA-TARTTFSLLNCKDXXXXXXXXXXXXXXXXXXXXXXXXG-------FRSVIR 374
           S CVSS+A TAR TFSLL C                                   RS I 
Sbjct: 4   SFCVSSSAATARPTFSLLKCHHPSPPRVTLLSLSRSPPSPSSLSFSSSTFNPLKLRSPIG 63

Query: 375 HDGIGSVVKSKTS-NRSTGFRVLCYARPLTPPNLQWISAVSSLVLILARGTAVPKSFIVP 551
           H GIGS+VK +TS NRS+GFRVLCYARP  PPNLQWI+AVSSLVLILA+GT VPKSFIVP
Sbjct: 64  HGGIGSMVKPRTSSNRSSGFRVLCYARPFAPPNLQWIAAVSSLVLILAKGTTVPKSFIVP 123

Query: 552 LFALQAPAGVVAWIQGRYGVWSAFLALLVRLFFYIPGELELPFIALLLVMVAPHEAMRLR 731
           LFALQAPAG +AWI+G YG+W+AFLALLVRLFFYIPGELELPF+ALLLV+VAP+EAM+ R
Sbjct: 124 LFALQAPAGFIAWIKGSYGMWAAFLALLVRLFFYIPGELELPFLALLLVIVAPYEAMKFR 183

Query: 732 NTKEGALISLLISVYLAFQHFSRTGVRKSLDQGSIVATLAVICVTVASLLLLI 890
           +TKEGA ISLLI+VYLA+QHFSRT ++KS DQGS+VATLAVIC+T+ SL+L++
Sbjct: 184 DTKEGAFISLLIAVYLAYQHFSRTSLQKSFDQGSVVATLAVICITLVSLMLVL 236


>ref|NP_001236425.1| uncharacterized protein LOC100306024 [Glycine max]
           gi|255627311|gb|ACU14000.1| unknown [Glycine max]
          Length = 218

 Score =  267 bits (683), Expect = 4e-69
 Identities = 146/218 (66%), Positives = 165/218 (75%), Gaps = 2/218 (0%)
 Frame = +3

Query: 243 TARTTFSLLNCKDXXXXXXXXXXXXXXXXXXXXXXXXG-FRSVIRHDGIGSVVKSKTSNR 419
           +A +  SLLNCK                            RS I H G          +R
Sbjct: 11  SASSALSLLNCKQPPPVSCIRVPCLSRSSPPSLSYTFNPLRSFIGHGG----------SR 60

Query: 420 STGFRVLCYA-RPLTPPNLQWISAVSSLVLILARGTAVPKSFIVPLFALQAPAGVVAWIQ 596
           S GFRV CYA  PLTPPNLQWIS +SS+VLILARGTAVPKS+IVPLFALQAPAGVV+WI+
Sbjct: 61  SPGFRVHCYAPAPLTPPNLQWISTISSVVLILARGTAVPKSYIVPLFALQAPAGVVSWIK 120

Query: 597 GRYGVWSAFLALLVRLFFYIPGELELPFIALLLVMVAPHEAMRLRNTKEGALISLLISVY 776
           GRYGVW+AFLALL+RLFFYIPGELELPF+ALLL+MVAP+EAM+LR TKEGA+ISLLISVY
Sbjct: 121 GRYGVWTAFLALLIRLFFYIPGELELPFLALLLLMVAPYEAMKLRYTKEGAVISLLISVY 180

Query: 777 LAFQHFSRTGVRKSLDQGSIVATLAVICVTVASLLLLI 890
           LAFQHFSRT +++S DQGSIVATLAVIC+TV SLLLLI
Sbjct: 181 LAFQHFSRTSLQQSFDQGSIVATLAVICITVVSLLLLI 218


>ref|XP_003629898.1| Cold acclimation protein COR413-TM1 [Medicago truncatula]
           gi|355523920|gb|AET04374.1| Cold acclimation protein
           COR413-TM1 [Medicago truncatula]
          Length = 234

 Score =  253 bits (647), Expect = 6e-65
 Identities = 148/227 (65%), Positives = 166/227 (73%), Gaps = 3/227 (1%)
 Frame = +3

Query: 219 SACVSSTATAR-TTFSLLNCKDXXXXXXXXXXXXXXXXXXXXXXXXGFRSVIRHDGIGSV 395
           S+  +S   AR TTFSLLNC                            RS  RH GI   
Sbjct: 13  SSSSTSIVNARSTTFSLLNCTRTTDPSSSSSLSFSHPRTFNPLC---LRSFTRHYGIKIA 69

Query: 396 VKSKTSNRSTGFRVL-CYA-RPLTPPNLQWISAVSSLVLILARGTAVPKSFIVPLFALQA 569
              KTS  + GFR+   YA  P T PN+QW+S VSSLVLILA+GTAVPKSFIVPLFALQA
Sbjct: 70  HNPKTS--TNGFRLFSSYAPYPFTTPNIQWLSTVSSLVLILAKGTAVPKSFIVPLFALQA 127

Query: 570 PAGVVAWIQGRYGVWSAFLALLVRLFFYIPGELELPFIALLLVMVAPHEAMRLRNTKEGA 749
           PA V +WIQGRYGVWSAFLALLVRLFF+IPGELELPFIA LLV+VAPHEA+RLR+TKEGA
Sbjct: 128 PAPVFSWIQGRYGVWSAFLALLVRLFFHIPGELELPFIAFLLVIVAPHEAVRLRDTKEGA 187

Query: 750 LISLLISVYLAFQHFSRTGVRKSLDQGSIVATLAVICVTVASLLLLI 890
           +ISLLI+VYLAFQHFSRT + KS DQGS+V+TLAVI +TVASLLLLI
Sbjct: 188 VISLLIAVYLAFQHFSRTSLEKSFDQGSVVSTLAVIGITVASLLLLI 234


>gb|AFK38436.1| unknown [Medicago truncatula]
          Length = 234

 Score =  252 bits (643), Expect = 2e-64
 Identities = 147/227 (64%), Positives = 165/227 (72%), Gaps = 3/227 (1%)
 Frame = +3

Query: 219 SACVSSTATAR-TTFSLLNCKDXXXXXXXXXXXXXXXXXXXXXXXXGFRSVIRHDGIGSV 395
           S+  +S   AR TTFSLLNC                            RS  RH GI   
Sbjct: 13  SSSSTSIVNARSTTFSLLNCTRTTDPSSSSSLSFSHPRTFNPLC---LRSFTRHYGIKIA 69

Query: 396 VKSKTSNRSTGFRVL-CYA-RPLTPPNLQWISAVSSLVLILARGTAVPKSFIVPLFALQA 569
              KTS  + GFR+   YA  P T PN+QW+S VSSLVLILA+GTAVPKSFIVPLFALQA
Sbjct: 70  HNPKTS--TNGFRLFSSYAPYPFTTPNIQWLSTVSSLVLILAKGTAVPKSFIVPLFALQA 127

Query: 570 PAGVVAWIQGRYGVWSAFLALLVRLFFYIPGELELPFIALLLVMVAPHEAMRLRNTKEGA 749
           PA V +WIQGRYGVWSAFLAL VRLFF+IPGELELPFIA LLV+VAPHEA+RLR+TKEGA
Sbjct: 128 PAPVFSWIQGRYGVWSAFLALFVRLFFHIPGELELPFIAFLLVIVAPHEAVRLRDTKEGA 187

Query: 750 LISLLISVYLAFQHFSRTGVRKSLDQGSIVATLAVICVTVASLLLLI 890
           +ISLLI+VYLAFQHFSRT + KS DQGS+V+TLAVI +TVASLLLLI
Sbjct: 188 VISLLIAVYLAFQHFSRTSLEKSFDQGSVVSTLAVIGITVASLLLLI 234


>ref|XP_002273366.1| PREDICTED: uncharacterized protein LOC100265908 [Vitis vinifera]
           gi|297740634|emb|CBI30816.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  223 bits (569), Expect = 6e-56
 Identities = 110/175 (62%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
 Frame = +3

Query: 369 IRHDGIGSVVKSKTSNRSTGFRVLCYARPLTPPNLQWISAVSSLVLILARGTAVPKSFIV 548
           +R  G   VV  K      GF  +CY+ PLTPPNLQW+  VSS VL+L+RGTA  KSF+V
Sbjct: 39  LRFQGNHGVVMKKNRR---GFGAVCYSAPLTPPNLQWVCTVSSAVLMLSRGTAAQKSFLV 95

Query: 549 PLFALQAPAGVVAWIQGRYGVWSAFLALLVRLFFYIPGELELPFIALLLVMVAPHEAMRL 728
           PLFALQAP  +++WI+G YG W+AFLALLVRLFF+IPGELELPF+ALLLV+VAP++ M L
Sbjct: 96  PLFALQAPTSIISWIKGEYGAWTAFLALLVRLFFFIPGELELPFVALLLVIVAPYQVMNL 155

Query: 729 RNTKEGALISLLISVYLAFQHFSRTG-VRKSLDQGSIVATLAVICVTVASLLLLI 890
           R T+ GA++SLLI+ YLAFQHFSR G ++++ +QGSIVATLA+IC+T  S LL I
Sbjct: 156 RGTQMGAIVSLLIAGYLAFQHFSRAGSLQRAFNQGSIVATLAIICITAVSCLLFI 210


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