BLASTX nr result

ID: Glycyrrhiza23_contig00007934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007934
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626418.1| Pseudouridylate synthase-like protein [Medic...   279   2e-73
ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt...   266   1e-69
ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synt...   263   9e-69
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              233   9e-60
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   233   9e-60

>ref|XP_003626418.1| Pseudouridylate synthase-like protein [Medicago truncatula]
           gi|355501433|gb|AES82636.1| Pseudouridylate
           synthase-like protein [Medicago truncatula]
          Length = 669

 Score =  279 bits (713), Expect = 2e-73
 Identities = 135/172 (78%), Positives = 155/172 (90%)
 Frame = -1

Query: 519 ASTRVQKYGTDQVVLGDLVYCKENPSGKVTGLVVSEFEDDCGDRYDSSNEDEVSGDIHEE 340
           ASTRV+KYGT+QVVLGDLVYCKENPS KVTG+V  E +DD GD YD++NEDEVSGDIH++
Sbjct: 413 ASTRVKKYGTEQVVLGDLVYCKENPSEKVTGIVGPECDDDRGDSYDTNNEDEVSGDIHDK 472

Query: 339 RISYGIKVVDAEDLNSRCYTIDDVILPLPGSRANYPTNDVAKVYHDLANKDGISLTESVH 160
           R SY +K V  EDLNS+CY IDDVILP+PGSR+ YPTND+ +VY+DL +KDGISLT+SVH
Sbjct: 473 RNSY-VKAVTTEDLNSKCYAIDDVILPMPGSRSIYPTNDIVEVYNDLTSKDGISLTDSVH 531

Query: 159 NVKEFSITNVTGSFRRVFQKPINFEWELLTYTDSNKPLVETDLDKIRKSKPI 4
           N KEFSIT+VTGS+RRVFQKPI+FEWELLTYTDSNKPLVETDLDKI KSKPI
Sbjct: 532 NAKEFSITSVTGSYRRVFQKPIDFEWELLTYTDSNKPLVETDLDKIGKSKPI 583


>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine
           max]
          Length = 687

 Score =  266 bits (680), Expect = 1e-69
 Identities = 129/173 (74%), Positives = 150/173 (86%)
 Frame = -1

Query: 519 ASTRVQKYGTDQVVLGDLVYCKENPSGKVTGLVVSEFEDDCGDRYDSSNEDEVSGDIHEE 340
           AS RVQKYGT+ VVLGDLVYCKEN +GKVT  V SE+ +DC  RYDS+NEDEVSG+IHEE
Sbjct: 421 ASKRVQKYGTENVVLGDLVYCKENSTGKVTEFVGSEYAEDCRGRYDSNNEDEVSGEIHEE 480

Query: 339 RISYGIKVVDAEDLNSRCYTIDDVILPLPGSRANYPTNDVAKVYHDLANKDGISLTESVH 160
             S  +KV+DAEDLNS CYTIDDVILP+PGSR  YPTN +A VY DLA KDGISLTESVH
Sbjct: 481 INS--VKVIDAEDLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVH 538

Query: 159 NVKEFSITNVTGSFRRVFQKPINFEWELLTYTDSNKPLVETDLDKIRKSKPIN 1
           NV++FSIT++TG +RRVFQKPINFEWELL+Y+DS++ LV+TDLDKI KSKP+N
Sbjct: 539 NVEDFSITSITGCYRRVFQKPINFEWELLSYSDSSEQLVDTDLDKINKSKPMN 591


>ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine
           max]
          Length = 687

 Score =  263 bits (673), Expect = 9e-69
 Identities = 129/172 (75%), Positives = 147/172 (85%)
 Frame = -1

Query: 519 ASTRVQKYGTDQVVLGDLVYCKENPSGKVTGLVVSEFEDDCGDRYDSSNEDEVSGDIHEE 340
           AS RVQKYGT+ VVLGDLVYCKEN +GKVT  V SE+ +DC  RYDS+NEDE+SG+IHEE
Sbjct: 421 ASKRVQKYGTENVVLGDLVYCKENSTGKVTESVGSEYAEDCSGRYDSNNEDEISGEIHEE 480

Query: 339 RISYGIKVVDAEDLNSRCYTIDDVILPLPGSRANYPTNDVAKVYHDLANKDGISLTESVH 160
             S  +KVVD EDLNS  YTIDDVILP+PGSR  YPTN +A VY DLA KDGISLTESVH
Sbjct: 481 IDS--VKVVDVEDLNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLTESVH 538

Query: 159 NVKEFSITNVTGSFRRVFQKPINFEWELLTYTDSNKPLVETDLDKIRKSKPI 4
           NV++FSIT++TG +RRVFQKPINFEWELLTY+DSNK LVETDLDK+ KSKP+
Sbjct: 539 NVEDFSITSITGCYRRVFQKPINFEWELLTYSDSNKQLVETDLDKVNKSKPM 590


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  233 bits (595), Expect = 9e-60
 Identities = 122/175 (69%), Positives = 141/175 (80%), Gaps = 2/175 (1%)
 Frame = -1

Query: 519 ASTRVQKYGTDQVVLGDLVYCKENPSGKVTGLVVSEFEDD-CGDRYDSSNEDEVSG-DIH 346
           AS RVQ YGT QVVLGDLVYCK + + KVT +V SEF+DD C D +DSS+ DE+S  D+ 
Sbjct: 419 ASMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLP 478

Query: 345 EERISYGIKVVDAEDLNSRCYTIDDVILPLPGSRANYPTNDVAKVYHDLANKDGISLTES 166
           EER +  +K +DAEDL +  YTIDDV+LPLPGSRA YPTND+A+VYHD A KD ISLTES
Sbjct: 479 EER-NDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTES 537

Query: 165 VHNVKEFSITNVTGSFRRVFQKPINFEWELLTYTDSNKPLVETDLDKIRKSKPIN 1
            H+VKEFSITN+TG FRRVFQKPI+FEWELLTYT+ N PL ETD DKI KSKP N
Sbjct: 538 AHSVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSN 592


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
           vinifera]
          Length = 694

 Score =  233 bits (595), Expect = 9e-60
 Identities = 122/175 (69%), Positives = 141/175 (80%), Gaps = 2/175 (1%)
 Frame = -1

Query: 519 ASTRVQKYGTDQVVLGDLVYCKENPSGKVTGLVVSEFEDD-CGDRYDSSNEDEVSG-DIH 346
           AS RVQ YGT QVVLGDLVYCK + + KVT +V SEF+DD C D +DSS+ DE+S  D+ 
Sbjct: 420 ASMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLP 479

Query: 345 EERISYGIKVVDAEDLNSRCYTIDDVILPLPGSRANYPTNDVAKVYHDLANKDGISLTES 166
           EER +  +K +DAEDL +  YTIDDV+LPLPGSRA YPTND+A+VYHD A KD ISLTES
Sbjct: 480 EER-NDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTES 538

Query: 165 VHNVKEFSITNVTGSFRRVFQKPINFEWELLTYTDSNKPLVETDLDKIRKSKPIN 1
            H+VKEFSITN+TG FRRVFQKPI+FEWELLTYT+ N PL ETD DKI KSKP N
Sbjct: 539 AHSVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSN 593


Top