BLASTX nr result

ID: Glycyrrhiza23_contig00007923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007923
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525556.1| PREDICTED: histone deacetylase 6-like [Glyci...   284   1e-74
ref|XP_003549603.1| PREDICTED: histone deacetylase 6-like [Glyci...   277   2e-72
ref|XP_003601202.1| Histone deacetylase [Medicago truncatula] gi...   256   3e-66
ref|XP_002511337.1| histone deacetylase 1, 2 ,3, putative [Ricin...   245   7e-63
ref|XP_004138094.1| PREDICTED: histone deacetylase 6-like [Cucum...   240   2e-61

>ref|XP_003525556.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 476

 Score =  284 bits (726), Expect = 1e-74
 Identities = 135/167 (80%), Positives = 141/167 (84%), Gaps = 2/167 (1%)
 Frame = +3

Query: 3   FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVD 182
           FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVD
Sbjct: 310 FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVD 369

Query: 183 PSNMENLNTPKDMEKIRNTLLEQLSRLPHAPSVPFQTTPSTLEAPEEAEEDMDRRPKHRK 362
           PSNMENLNTPKDMEKIRNTLLEQ+S+LPHAP VPFQTTP TL+ PEEAEEDMDRRPK RK
Sbjct: 370 PSNMENLNTPKDMEKIRNTLLEQISQLPHAPGVPFQTTPPTLQLPEEAEEDMDRRPKLRK 429

Query: 363 WSGXXXXXXXXXXXKIQSS--NFSDHMRDVADDMEEEKPEVHTSFCC 497
           W G           K  S   N + HMRD+ D+MEEEKPEVH S CC
Sbjct: 430 WDGEDYDSDPDEGGKANSKFPNVTAHMRDITDEMEEEKPEVHPSSCC 476


>ref|XP_003549603.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 472

 Score =  277 bits (708), Expect = 2e-72
 Identities = 133/166 (80%), Positives = 141/166 (84%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVD 182
           FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVD
Sbjct: 306 FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVD 365

Query: 183 PSNMENLNTPKDMEKIRNTLLEQLSRLPHAPSVPFQTTPSTLEAPEEAEEDMDRRPKHRK 362
           PSNMENLNT KD+EK+RNTLLEQ+SRLPHAPSVPFQTTP TL+ PEEAEE+MDRRPK RK
Sbjct: 366 PSNMENLNTSKDLEKLRNTLLEQISRLPHAPSVPFQTTPPTLQLPEEAEENMDRRPKLRK 425

Query: 363 WSGXXXXXXXXXXXKIQS--SNFSDHMRDVADDMEEEKPEVHTSFC 494
           W G           K  S  SN + HMRD+AD+MEEEKPE H S C
Sbjct: 426 WDGEDYDSDPEEGGKDNSKFSNITAHMRDIADEMEEEKPEEHPSSC 471


>ref|XP_003601202.1| Histone deacetylase [Medicago truncatula]
           gi|355490250|gb|AES71453.1| Histone deacetylase
           [Medicago truncatula]
          Length = 476

 Score =  256 bits (654), Expect = 3e-66
 Identities = 123/161 (76%), Positives = 134/161 (83%), Gaps = 2/161 (1%)
 Frame = +3

Query: 3   FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVD 182
           FLRSFNVPLMVLGGGGYT+RNVARCWCYETAVAVGVEP NKLPYNEYYEYFGPDYTL+V+
Sbjct: 308 FLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPSNKLPYNEYYEYFGPDYTLHVE 367

Query: 183 PSNMENLNTPKDMEKIRNTLLEQLSRLPHAPSVPFQTTPSTLEAPEEAEEDMDRRPKHRK 362
           P+NMENLNTPKDMEKIRNTLLEQ++RLPHAPS PFQTTPST E PE  EEDMD RPK + 
Sbjct: 368 PNNMENLNTPKDMEKIRNTLLEQIARLPHAPSAPFQTTPSTAEVPEVEEEDMDIRPKRQL 427

Query: 363 WSGXXXXXXXXXXXK--IQSSNFSDHMRDVADDMEEEKPEV 479
           WSG           K  I+SS+ + HMR  AD MEE+KPEV
Sbjct: 428 WSGEDYDSDPDEDEKANIRSSSLTSHMRRAADMMEEDKPEV 468


>ref|XP_002511337.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
           gi|223550452|gb|EEF51939.1| histone deacetylase 1, 2 ,3,
           putative [Ricinus communis]
          Length = 468

 Score =  245 bits (625), Expect = 7e-63
 Identities = 118/166 (71%), Positives = 132/166 (79%), Gaps = 6/166 (3%)
 Frame = +3

Query: 3   FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVD 182
           FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTL++D
Sbjct: 300 FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHID 359

Query: 183 PSNMENLNTPKDMEKIRNTLLEQLSRLPHAPSVPFQTTPSTLEAPEEAEEDMDRRPKHRK 362
           PSNMENLN+PKDME+IRN LLEQLS+LP+APSVPFQTTP+  E PEE +E+MDRRPK R 
Sbjct: 360 PSNMENLNSPKDMERIRNILLEQLSKLPNAPSVPFQTTPAITEVPEEGDEEMDRRPKRRI 419

Query: 363 WSG----XXXXXXXXXXXKIQSSNF--SDHMRDVADDMEEEKPEVH 482
           W G               ++ S      D MRD  D+MEE+K +VH
Sbjct: 420 WDGEGYESPDEDEKPQPRRLNSDGLVAKDEMRDHIDEMEEDKKDVH 465


>ref|XP_004138094.1| PREDICTED: histone deacetylase 6-like [Cucumis sativus]
           gi|449523768|ref|XP_004168895.1| PREDICTED: histone
           deacetylase 6-like [Cucumis sativus]
          Length = 465

 Score =  240 bits (613), Expect = 2e-61
 Identities = 119/169 (70%), Positives = 133/169 (78%), Gaps = 4/169 (2%)
 Frame = +3

Query: 3   FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVD 182
           FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY+EYFGPDY L+++
Sbjct: 300 FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYALHIE 359

Query: 183 PSNMENLNTPKDMEKIRNTLLEQLSRLPHAPSVPFQTTPSTLEAPEEAEEDMDRRPKHRK 362
           PSNMENLN+PKDMEKIRNTLLEQLSRLPHAPSVPFQ TPS+ E PEE EE ++RRPK R 
Sbjct: 360 PSNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSS-EIPEEVEESIERRPKRRI 418

Query: 363 WSGXXXXXXXXXXXK----IQSSNFSDHMRDVADDMEEEKPEVHTSFCC 497
           W+G           K     + +  ++  RDV DDMEE+K   H   CC
Sbjct: 419 WNGEDYDSDSEENRKRPNISEGTGVNNLTRDVVDDMEEDKNMGHQ--CC 465


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