BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007902
         (1377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610579.1| Pentatricopeptide repeat-containing protein ...   626   e-177
ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containi...   620   e-175
ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containi...   615   e-173
ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containi...   571   e-160
ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containi...   563   e-158

>ref|XP_003610579.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355511634|gb|AES92776.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 706

 Score =  626 bits (1614), Expect = e-177
 Identities = 306/358 (85%), Positives = 331/358 (92%)
 Frame = +3

Query: 3    NNGFSPNRATYASLLQAYGRARYSEDALIVYKEMKEKGMDLNTHLYNTLLAMCADVGYAD 182
            NN   PNRATYASLL AYGRAR+ EDAL+VY+EM+EK MDLNTHLYN+LLAMCADVGY D
Sbjct: 349  NNDILPNRATYASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTD 408

Query: 183  EAFEIFEDMRSSATCLPDSWTFSSLITIYSCSGKVSDAERMFNEMIESGFEPTIFVLTSL 362
             AFEIFEDM+SS TC PDSWTFSSLITIYSCSG+VS+AERM NEMIESGFEPTIFVLTSL
Sbjct: 409  LAFEIFEDMKSSDTCSPDSWTFSSLITIYSCSGRVSEAERMMNEMIESGFEPTIFVLTSL 468

Query: 363  VQCYGKAKRTDDVVKTFNQLLDLGMAPDDRFCGCLLNVMTQTPKEELGKLTDCVEKANPK 542
            VQCYGKAKRTDDVVKTFNQLLD+G+ PDDRFCGCLLNVMTQTPKEELGKL DCVEKANPK
Sbjct: 469  VQCYGKAKRTDDVVKTFNQLLDMGIEPDDRFCGCLLNVMTQTPKEELGKLIDCVEKANPK 528

Query: 543  LGSVVRYVVEGLEGDGEFRKEASELFNSIIDGVKKAFCNSLIDLCINLDMLDRACELLDL 722
            L  VVRY+VEGLEGDGEFRKEA ELF+SI DGVK+AFCNSLIDLCINLD+LDRA  LLDL
Sbjct: 529  LSFVVRYLVEGLEGDGEFRKEALELFSSITDGVKRAFCNSLIDLCINLDLLDRARVLLDL 588

Query: 723  GLTLEIYTDIQSRTQTQWSLHLKGLSPGAALTAFHVWINDLSKALESGEDLPPLLGINTG 902
            GLTLEIYTDIQSR+QTQWSL L+GLS GA+LTAFHVWINDLSKA ESGEDLPPLLGI+TG
Sbjct: 589  GLTLEIYTDIQSRSQTQWSLILRGLSVGASLTAFHVWINDLSKAFESGEDLPPLLGIHTG 648

Query: 903  HGKHKYSEKGLASVFESHLKELGAPLQEAPDKAGWFLTTQVAAKSWLESRGSSELVAA 1076
            HGKH+YS+KGLA V ESH+KEL AP +E+PDKAGWFLTTQVA KSW+ESRGSS+LVAA
Sbjct: 649  HGKHRYSDKGLAGVIESHMKELDAPFRESPDKAGWFLTTQVAVKSWMESRGSSKLVAA 706


>ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
            chloroplastic-like [Glycine max]
          Length = 689

 Score =  620 bits (1598), Expect = e-175
 Identities = 302/351 (86%), Positives = 326/351 (92%), Gaps = 1/351 (0%)
 Frame = +3

Query: 3    NNGFSPNRATYASLLQAYGRARYSEDALIVYKEMKEKGMDLNTHLYNTLLAMCADVGYAD 182
            NNGF PN ATYASLL+AYGR RYSEDAL VYKEMKEKGM++NTHLYNTLLAMCAD+G AD
Sbjct: 334  NNGFLPNWATYASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADLGLAD 393

Query: 183  EAFEIFEDMRSSATCLPDSWTFSSLITIYSCSGKVSDAERMFNEMIESGFEPTIFVLTSL 362
            +AF+IFEDM+SSATCL DSWTFSSLITIYSCSG VS+AERM NEMIESGF+PTIFVLTSL
Sbjct: 394  DAFKIFEDMKSSATCLCDSWTFSSLITIYSCSGNVSEAERMLNEMIESGFQPTIFVLTSL 453

Query: 363  VQCYGKAKRTDDVVKTFNQLLDLGMAPDDRFCGCLLNVMTQTPKEELGKLTDCVEKANPK 542
            VQCYGK  RTDDV+KTFNQLLDLG++PDDRFCGCLLNVMTQTPKEELGKL DCVEKANPK
Sbjct: 454  VQCYGKVGRTDDVLKTFNQLLDLGISPDDRFCGCLLNVMTQTPKEELGKLNDCVEKANPK 513

Query: 543  LGSVVRYVVEGL-EGDGEFRKEASELFNSIIDGVKKAFCNSLIDLCINLDMLDRACELLD 719
            LGSV+RY+VEGL EGDGEFRKEASELFNSI D VKK FCNSLIDLC+NL++LD+ACELLD
Sbjct: 514  LGSVLRYLVEGLEEGDGEFRKEASELFNSIADEVKKPFCNSLIDLCVNLNLLDKACELLD 573

Query: 720  LGLTLEIYTDIQSRTQTQWSLHLKGLSPGAALTAFHVWINDLSKALESGEDLPPLLGINT 899
            LGLTLEIYTDIQS++QTQWSLHLK LS GA+LTA H WINDLSK LESGEDLPPLLGINT
Sbjct: 574  LGLTLEIYTDIQSKSQTQWSLHLKSLSLGASLTALHAWINDLSKTLESGEDLPPLLGINT 633

Query: 900  GHGKHKYSEKGLASVFESHLKELGAPLQEAPDKAGWFLTTQVAAKSWLESR 1052
            GHGKH+YS+KGLA+V ESHL EL AP  EAPDKAGWFLTTQVAAKSWLESR
Sbjct: 634  GHGKHRYSDKGLANVVESHLNELNAPFHEAPDKAGWFLTTQVAAKSWLESR 684



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 34/151 (22%), Positives = 77/151 (50%)
 Frame = +3

Query: 18  PNRATYASLLQAYGRARYSEDALIVYKEMKEKGMDLNTHLYNTLLAMCADVGYADEAFEI 197
           P+  TY++++ AYGRA   + AL +Y   + +   L++  ++TL+ M    G  D    +
Sbjct: 234 PDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDSVTFSTLIKMYGLAGNYDGCLNV 293

Query: 198 FEDMRSSATCLPDSWTFSSLITIYSCSGKVSDAERMFNEMIESGFEPTIFVLTSLVQCYG 377
           +++M++      +   +++L+     + +   A+ ++ EM  +GF P      SL++ YG
Sbjct: 294 YQEMKALGV-KSNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFLPNWATYASLLRAYG 352

Query: 378 KAKRTDDVVKTFNQLLDLGMAPDDRFCGCLL 470
           + + ++D +  + ++ + GM  +      LL
Sbjct: 353 RGRYSEDALFVYKEMKEKGMEMNTHLYNTLL 383


>ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
            chloroplastic-like [Glycine max]
          Length = 685

 Score =  615 bits (1585), Expect = e-173
 Identities = 303/359 (84%), Positives = 328/359 (91%), Gaps = 1/359 (0%)
 Frame = +3

Query: 3    NNGFSPNRATYASLLQAYGRARYSEDALIVYKEMKEKGMDLNTHLYNTLLAMCADVGYAD 182
            NNGFSPN  TYASLL+AYGR RYSEDAL VYKEMKEKGM++NTHLYNTLLAMCAD+G A+
Sbjct: 330  NNGFSPNWVTYASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADLGLAN 389

Query: 183  EAFEIFEDMRSSATCLPDSWTFSSLITIYSCSGKVSDAERMFNEMIESGFEPTIFVLTSL 362
            EAFEIFEDM++SATCL DSWTFSSLITIYSC+G VS+AERM NEMIESG +PTIFVLTSL
Sbjct: 390  EAFEIFEDMKTSATCLCDSWTFSSLITIYSCTGNVSEAERMLNEMIESGSQPTIFVLTSL 449

Query: 363  VQCYGKAKRTDDVVKTFNQLLDLGMAPDDRFCGCLLNVMTQTPKEELGKLTDCVEKANPK 542
            VQCYGK  RTDDVVKTFNQLLDLG++PDDRFCGCLLNVMTQTPKEELGKL DCV+KANPK
Sbjct: 450  VQCYGKVGRTDDVVKTFNQLLDLGISPDDRFCGCLLNVMTQTPKEELGKLNDCVKKANPK 509

Query: 543  LGSVVRYVVEGL-EGDGEFRKEASELFNSIIDGVKKAFCNSLIDLCINLDMLDRACELLD 719
            LGSVVRY+VEGL EG GEF+KEASELFNSI D VKK FCNSLIDLC+NL++LD+ACELLD
Sbjct: 510  LGSVVRYLVEGLEEGGGEFKKEASELFNSIADEVKKPFCNSLIDLCVNLNLLDKACELLD 569

Query: 720  LGLTLEIYTDIQSRTQTQWSLHLKGLSPGAALTAFHVWINDLSKALESGEDLPPLLGINT 899
            LGLTLEIYTD+QS++QTQWSLHLK LS GA+LTA H WINDLSK LESGEDLPPLLGINT
Sbjct: 570  LGLTLEIYTDVQSKSQTQWSLHLKSLSLGASLTALHAWINDLSKTLESGEDLPPLLGINT 629

Query: 900  GHGKHKYSEKGLASVFESHLKELGAPLQEAPDKAGWFLTTQVAAKSWLESRGSSELVAA 1076
            GHGKH+YS+KGLASV ESHL EL AP  EAPDKAGWFLTTQVAAKSWLESR   ELV A
Sbjct: 630  GHGKHRYSDKGLASVVESHLNELNAPFHEAPDKAGWFLTTQVAAKSWLESR---ELVTA 685



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 37/154 (24%), Positives = 78/154 (50%)
 Frame = +3

Query: 9   GFSPNRATYASLLQAYGRARYSEDALIVYKEMKEKGMDLNTHLYNTLLAMCADVGYADEA 188
           G  P+  TY++++ AYGRA   + AL +Y   + +   L+T  ++TL+ M    G  D  
Sbjct: 227 GCEPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDTVTFSTLIKMYGLAGNYDGC 286

Query: 189 FEIFEDMRSSATCLPDSWTFSSLITIYSCSGKVSDAERMFNEMIESGFEPTIFVLTSLVQ 368
             ++++M+      P+   +++L+     + +   A+ ++ EM  +GF P      SL++
Sbjct: 287 LNVYQEMKVLGV-KPNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFSPNWVTYASLLR 345

Query: 369 CYGKAKRTDDVVKTFNQLLDLGMAPDDRFCGCLL 470
            YG+ + ++D +  + ++ + GM  +      LL
Sbjct: 346 AYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLL 379


>ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
            chloroplastic-like [Cucumis sativus]
            gi|449492820|ref|XP_004159111.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g16390,
            chloroplastic-like [Cucumis sativus]
          Length = 704

 Score =  571 bits (1471), Expect = e-160
 Identities = 274/357 (76%), Positives = 313/357 (87%)
 Frame = +3

Query: 6    NGFSPNRATYASLLQAYGRARYSEDALIVYKEMKEKGMDLNTHLYNTLLAMCADVGYADE 185
            NGFSP+ ATYASLL+AYGRARY EDALIVYKEMKEKG+ LN  LYNTLLAMCADVGY +E
Sbjct: 348  NGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNE 407

Query: 186  AFEIFEDMRSSATCLPDSWTFSSLITIYSCSGKVSDAERMFNEMIESGFEPTIFVLTSLV 365
            A EIF+DM+SS TC PDSWTFSS+ITIYSC GKVS+AE M N+M+E+GF+P IFVLTSL+
Sbjct: 408  AVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLI 467

Query: 366  QCYGKAKRTDDVVKTFNQLLDLGMAPDDRFCGCLLNVMTQTPKEELGKLTDCVEKANPKL 545
            QCYGKAKR DDVV+TFNQL++LG+ PDDRFCGCLLNV+TQTPK ELGKL DCV +ANPKL
Sbjct: 468  QCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKL 527

Query: 546  GSVVRYVVEGLEGDGEFRKEASELFNSIIDGVKKAFCNSLIDLCINLDMLDRACELLDLG 725
            G VV  ++   + +G FR EASELF+ +   V+KA+CN LIDLC+NLD+LD+ACELLDLG
Sbjct: 528  GFVVELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLG 587

Query: 726  LTLEIYTDIQSRTQTQWSLHLKGLSPGAALTAFHVWINDLSKALESGEDLPPLLGINTGH 905
            LTL+IY D+QSR+ TQWSL+LKGLS GAALTA HVWI DL+K LESGE+LPPLLGINTGH
Sbjct: 588  LTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGH 647

Query: 906  GKHKYSEKGLASVFESHLKELGAPLQEAPDKAGWFLTTQVAAKSWLESRGSSELVAA 1076
            GKHKYS+KGLASVFESHLKEL AP  EAP+K GWFLTT+VAAKSWLESR S ELVAA
Sbjct: 648  GKHKYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 30/141 (21%), Positives = 75/141 (53%)
 Frame = +3

Query: 15  SPNRATYASLLQAYGRARYSEDALIVYKEMKEKGMDLNTHLYNTLLAMCADVGYADEAFE 194
           +P+  TY++++ AYGRA   + A  +Y   + +   ++   ++T++ +    G  D    
Sbjct: 246 NPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLN 305

Query: 195 IFEDMRSSATCLPDSWTFSSLITIYSCSGKVSDAERMFNEMIESGFEPTIFVLTSLVQCY 374
           ++E+M++     P+   ++ L+     + +    + ++ EMI++GF P+     SL++ Y
Sbjct: 306 VYEEMKAIG-IKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364

Query: 375 GKAKRTDDVVKTFNQLLDLGM 437
           G+A+  +D +  + ++ + G+
Sbjct: 365 GRARYGEDALIVYKEMKEKGL 385


>ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
            chloroplastic [Vitis vinifera]
          Length = 701

 Score =  563 bits (1452), Expect = e-158
 Identities = 268/357 (75%), Positives = 314/357 (87%)
 Frame = +3

Query: 3    NNGFSPNRATYASLLQAYGRARYSEDALIVYKEMKEKGMDLNTHLYNTLLAMCADVGYAD 182
            NNG  P+  TYA+LL+AYGRARY+EDALIVYKEMKEKG++L+  LYNTLLAMCADVGY +
Sbjct: 344  NNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTE 403

Query: 183  EAFEIFEDMRSSATCLPDSWTFSSLITIYSCSGKVSDAERMFNEMIESGFEPTIFVLTSL 362
            EA  IFEDM+SS  C+PDSWTFSSLITIYSCSGKVS+AE M N M+E+GFEP IFVLTSL
Sbjct: 404  EAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSL 463

Query: 363  VQCYGKAKRTDDVVKTFNQLLDLGMAPDDRFCGCLLNVMTQTPKEELGKLTDCVEKANPK 542
            +QCYGKA RTD+VV+TF++LL+L + PDDRFCGC+LNVMTQ+PKEELGKL DC++KANPK
Sbjct: 464  IQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKLIDCIDKANPK 523

Query: 543  LGSVVRYVVEGLEGDGEFRKEASELFNSIIDGVKKAFCNSLIDLCINLDMLDRACELLDL 722
            LG+VV+ ++E   G+G FRKEASELF+SI   VKKA+CN LIDLC+NL++L++ACEL DL
Sbjct: 524  LGNVVKLLLEEQNGEGTFRKEASELFDSISADVKKAYCNCLIDLCVNLNLLEKACELFDL 583

Query: 723  GLTLEIYTDIQSRTQTQWSLHLKGLSPGAALTAFHVWINDLSKALESGEDLPPLLGINTG 902
            GLTLEIY DIQS++ TQWSLHLK LS GAALTA H+W+NDLSKA+E GE+LP +LGINTG
Sbjct: 584  GLTLEIYIDIQSKSPTQWSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTG 643

Query: 903  HGKHKYSEKGLASVFESHLKELGAPLQEAPDKAGWFLTTQVAAKSWLESRGSSELVA 1073
            HGKHKYS+KGLASVFESHLKEL AP  EAPDK GWFLTT+VAA SWLESR + ELVA
Sbjct: 644  HGKHKYSDKGLASVFESHLKELNAPFHEAPDKVGWFLTTKVAATSWLESRSAPELVA 700



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 31/143 (21%), Positives = 76/143 (53%)
 Frame = +3

Query: 9   GFSPNRATYASLLQAYGRARYSEDALIVYKEMKEKGMDLNTHLYNTLLAMCADVGYADEA 188
           G  P+  TY++++ AYGRA   + AL +Y   + +   ++   ++TL+ +    G  D  
Sbjct: 241 GCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGC 300

Query: 189 FEIFEDMRSSATCLPDSWTFSSLITIYSCSGKVSDAERMFNEMIESGFEPTIFVLTSLVQ 368
             ++E+M++     P+   +++L+     + +   A+ ++ EM  +G +P+     +L++
Sbjct: 301 LNVYEEMKALGV-KPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLR 359

Query: 369 CYGKAKRTDDVVKTFNQLLDLGM 437
            YG+A+  +D +  + ++ + G+
Sbjct: 360 AYGRARYAEDALIVYKEMKEKGL 382