BLASTX nr result

ID: Glycyrrhiza23_contig00007862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007862
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   147   7e-34
ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago tr...   129   3e-28
ref|XP_004143728.1| PREDICTED: ATP-dependent DNA helicase PcrA-l...    61   1e-07
ref|XP_004158147.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...    59   3e-07
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...    57   1e-06

>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  147 bits (372), Expect = 7e-34
 Identities = 86/138 (62%), Positives = 104/138 (75%)
 Frame = -2

Query: 418 PSVGAAAKENLCQSNFETPRKEPEGSSKPEPLDYFSGSGLLDDDFDESIFEQIDILCEQK 239
           P+VG+A  ENLC+S FETPR+EPEGS KP+ LD FS +GLLDDDFD+S  EQIDILCEQK
Sbjct: 87  PAVGSA-DENLCRSLFETPRREPEGS-KPKQLDCFSTTGLLDDDFDDSFLEQIDILCEQK 144

Query: 238 SAEKAAVTGLDHSCHERVSSESSAFGGVNLSWGTSAVSEGIGNGDLLSSSGADLDPKEEE 59
           SAE+ A    D S  E++SS+S+  G VNLS  +  VSEGIGNG LL SSG +LD +EEE
Sbjct: 145 SAEQQA----DRSSDEKLSSKSNVVGDVNLSSESGTVSEGIGNGHLL-SSGIELDSREEE 199

Query: 58  HVDMARQSLQSGTMPEEY 5
            VD + + L + TMPEEY
Sbjct: 200 -VDSSWRDLLNSTMPEEY 216


>ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago truncatula]
           gi|355479755|gb|AES60958.1| ATP-dependent DNA helicase
           pcrA [Medicago truncatula]
          Length = 906

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/112 (62%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
 Frame = -2

Query: 406 AAAKENLCQSNFETPRKEPEGSSKPEPLDYFSGSGLLDDDFDESIFEQIDILCEQKSAEK 227
           +A KENLCQSNFETPRKE  G  + E LDYF  SGLLDDDFD+SI EQIDI+CE+KSA K
Sbjct: 94  SAVKENLCQSNFETPRKE-SGGFESESLDYFYASGLLDDDFDDSILEQIDIMCEEKSAVK 152

Query: 226 -AAVTGLDHSCHERVSSESSAFGGVNLSWGTSAVSEGIGNGDLLSSSGADLD 74
            A V GL HSCHE+VSSE +  G V++  GT+ VS+ IGN DL  S    +D
Sbjct: 153 TAGVEGLGHSCHEKVSSEGNVVGNVDMGLGTN-VSKDIGNDDLNESILEQID 203



 Score =  117 bits (294), Expect = 8e-25
 Identities = 69/99 (69%), Positives = 74/99 (74%), Gaps = 2/99 (2%)
 Frame = -2

Query: 292 DDFDESIFEQIDILCEQKSAEKAAVTGLDHSCHERVSSESSAFGGVNLSWGTSAVSEGIG 113
           DDFDESI EQIDILCEQKSA KAA  GLD SC E VSSES     V++S  TSAVSEGIG
Sbjct: 256 DDFDESILEQIDILCEQKSAVKAAGQGLDQSCQENVSSESGLVCTVDMSLATSAVSEGIG 315

Query: 112 NGDLLSSSGADLDPKEEEHVD--MARQSLQSGTMPEEYS 2
           +GD+L   G DLD K EEHVD    R+SL SGTMPEEYS
Sbjct: 316 SGDML-CFGIDLDHK-EEHVDSETTRKSLPSGTMPEEYS 352



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/83 (51%), Positives = 55/83 (66%)
 Frame = -2

Query: 295 DDDFDESIFEQIDILCEQKSAEKAAVTGLDHSCHERVSSESSAFGGVNLSWGTSAVSEGI 116
           +DD +ESI EQIDIL EQKSAEK A  G++H+C ERVSSESS    V++  GTSA  + I
Sbjct: 191 NDDLNESILEQIDILFEQKSAEKEAGMGIEHNCRERVSSESSVVSNVDMDLGTSAFPKDI 250

Query: 115 GNGDLLSSSGADLDPKEEEHVDM 47
           GNG++      D D    E +D+
Sbjct: 251 GNGEI-----DDFDESILEQIDI 268


>ref|XP_004143728.1| PREDICTED: ATP-dependent DNA helicase PcrA-like [Cucumis sativus]
          Length = 1105

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 50/139 (35%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
 Frame = -2

Query: 415 SVGAAAKENLCQSNFETPRKEPEGSSKPEPLDYFSGSGLLDDDFDESIFEQIDILCEQKS 236
           SV       L     +TP K P  S      D FS   +LDDDFDES  E+ID L EQ S
Sbjct: 85  SVNTPLSNGLGLDCLKTPVKTPTCSGIR---DSFSVPSILDDDFDESALEEIDALLEQSS 141

Query: 235 AEKAAVTGLDHSCHERVSSESSAFGGVNLSWGTSAVSEGIGNGDLLSSSGADLDPKEEEH 56
           + ++     D S H       S  GG++  + +      I   DLL S  A  +P+ E  
Sbjct: 142 SGRSVRPASDSSFHVTNQDHGSYNGGLSADFQSVIGGGSIEAKDLLCSLDAS-EPRAELI 200

Query: 55  V-DMARQSLQSGTMPEEYS 2
           + D A + +  GTMPEEYS
Sbjct: 201 ISDSAMKKI--GTMPEEYS 217


>ref|XP_004158147.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase
           PcrA-like [Cucumis sativus]
          Length = 1129

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
 Frame = -2

Query: 415 SVGAAAKENLCQSNFETPRKEPEGSSKPEPLDYFSGSGLLDDDFDESIFEQIDILCEQKS 236
           SV       L     +TP K P  S      D FS   +LDDDFDES  E+ID L EQ S
Sbjct: 85  SVNTPLSNGLGLDCLKTPVKTPTCSGIR---DSFSVPSILDDDFDESALEEIDALLEQSS 141

Query: 235 AEKAAVTGLDHSCHERVSSESSAFGGVNLSWGTSAVSEGIGNGDLLSSSGADLDPKEEEH 56
           + ++     D S H       S  GG++  + +      I   DLL S  A  +P+ E  
Sbjct: 142 SGRSVRPASDSSFHVTNQDHGSYNGGLSADFQSVIGGGSIEAKDLLCSLDAS-EPRAELI 200

Query: 55  V-DMARQSLQSGTMPEEY 5
           + D A + +  GTMPEEY
Sbjct: 201 ISDSAMKKI--GTMPEEY 216


>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 48/143 (33%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
 Frame = -2

Query: 415 SVGAAAKENLCQSNFETPRKEPEGSSKPEPLDYFSGSGLLDDDFDESIFEQIDILCEQKS 236
           +VG    +     + ETP K   G   P   D    + +LDDD  ESI E+ID LCEQKS
Sbjct: 82  AVGVPLVDGFILDSSETPMK---GKVCPSVGDSLMSTNILDDDLCESILEEIDALCEQKS 138

Query: 235 AEKAAVTGLDHSCHERVSSESSAF----GGVNLS-WGTSAVSEGIGNGDLLSSSGADLDP 71
           A K      +  C   + S  S F    GG + S WG+    + +    +L   G DL+ 
Sbjct: 139 AAKT-----EGQCPNSIISMESQFRVKNGGKDSSNWGSVDAEKFLLTASMLRLEG-DLN- 191

Query: 70  KEEEHVDMARQSLQSGTMPEEYS 2
                   A Q+ Q  +MP+EYS
Sbjct: 192 ------SGAEQAAQPASMPDEYS 208


Top