BLASTX nr result

ID: Glycyrrhiza23_contig00007713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007713
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235864.1| uncharacterized protein LOC100306239 [Glycin...   198   1e-48
ref|XP_003534611.1| PREDICTED: protein cornichon homolog 4-like ...   194   2e-47
gb|AFK44916.1| unknown [Lotus japonicus]                              192   1e-46
ref|XP_002279334.1| PREDICTED: protein cornichon homolog 4 [Viti...   148   2e-33
ref|NP_172701.2| protein cornichon-4 [Arabidopsis thaliana] gi|7...   147   3e-33

>ref|NP_001235864.1| uncharacterized protein LOC100306239 [Glycine max]
           gi|255627977|gb|ACU14333.1| unknown [Glycine max]
          Length = 136

 Score =  198 bits (504), Expect = 1e-48
 Identities = 91/108 (84%), Positives = 101/108 (93%)
 Frame = +3

Query: 81  VDLEFDYINPYDSTTRINQVILPEFIIQGIFCFSNLIAGHWFIFLISLPCLYYNVTLYVK 260
           VDLEFDYINPYDST++INQV+LPEFII GIFCF+NLIAGHWFIFLISLP LYYN+ LY+K
Sbjct: 29  VDLEFDYINPYDSTSQINQVVLPEFIIHGIFCFTNLIAGHWFIFLISLPFLYYNLRLYIK 88

Query: 261 RQHLADVTEIYNKLNWEKKKRLFKVAHLVLTFVFAILSLVWTLTDDAH 404
           R+HLADVTEIYNKLNWEKKKRLFKVA+LVL F F I+SLVWTLT+D H
Sbjct: 89  REHLADVTEIYNKLNWEKKKRLFKVAYLVLVFAFCIVSLVWTLTEDVH 136


>ref|XP_003534611.1| PREDICTED: protein cornichon homolog 4-like [Glycine max]
          Length = 136

 Score =  194 bits (494), Expect = 2e-47
 Identities = 89/108 (82%), Positives = 100/108 (92%)
 Frame = +3

Query: 81  VDLEFDYINPYDSTTRINQVILPEFIIQGIFCFSNLIAGHWFIFLISLPCLYYNVTLYVK 260
           VDLEFDYINPYDST+RINQV+LPEFII GIFCF+NLIAGHWFIFL+SLP LYYN+ LY+K
Sbjct: 29  VDLEFDYINPYDSTSRINQVVLPEFIIHGIFCFTNLIAGHWFIFLLSLPFLYYNLRLYIK 88

Query: 261 RQHLADVTEIYNKLNWEKKKRLFKVAHLVLTFVFAILSLVWTLTDDAH 404
           R+HLADVTEIYNKL WEKKKRLFKV +LVL FVF+I+SLVWTL +D H
Sbjct: 89  REHLADVTEIYNKLYWEKKKRLFKVGYLVLVFVFSIVSLVWTLAEDVH 136


>gb|AFK44916.1| unknown [Lotus japonicus]
          Length = 136

 Score =  192 bits (488), Expect = 1e-46
 Identities = 87/108 (80%), Positives = 97/108 (89%)
 Frame = +3

Query: 81  VDLEFDYINPYDSTTRINQVILPEFIIQGIFCFSNLIAGHWFIFLISLPCLYYNVTLYVK 260
           VDLEFDYINPYDST+RINQV+LPEFII GIFCF+NLIAGHWF F +SLPC+YYN  LY K
Sbjct: 29  VDLEFDYINPYDSTSRINQVVLPEFIILGIFCFTNLIAGHWFTFFLSLPCMYYNARLYFK 88

Query: 261 RQHLADVTEIYNKLNWEKKKRLFKVAHLVLTFVFAILSLVWTLTDDAH 404
           R+HLADVTEIYNKL WEK KRLFK A+LV+ FVF+ILSLVWTLT+D H
Sbjct: 89  REHLADVTEIYNKLKWEKNKRLFKAANLVIIFVFSILSLVWTLTEDVH 136


>ref|XP_002279334.1| PREDICTED: protein cornichon homolog 4 [Vitis vinifera]
           gi|296089153|emb|CBI38856.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  148 bits (373), Expect = 2e-33
 Identities = 63/102 (61%), Positives = 86/102 (84%)
 Frame = +3

Query: 84  DLEFDYINPYDSTTRINQVILPEFIIQGIFCFSNLIAGHWFIFLISLPCLYYNVTLYVKR 263
           DLEFDY+NPYDS++RIN+VILPEFIIQG+ C  +L+ GHWF+FL+SLP LYYNV LY++R
Sbjct: 30  DLEFDYMNPYDSSSRINRVILPEFIIQGVLCLIHLVTGHWFMFLVSLPYLYYNVRLYMRR 89

Query: 264 QHLADVTEIYNKLNWEKKKRLFKVAHLVLTFVFAILSLVWTL 389
           QHL DVTEI+N+LN EK+ R+FK+ HL++    +I  ++W++
Sbjct: 90  QHLLDVTEIFNQLNREKQLRIFKLVHLIVLLTTSIFWMIWSI 131


>ref|NP_172701.2| protein cornichon-4 [Arabidopsis thaliana]
           gi|75148636|sp|Q84W04.1|CNIH4_ARATH RecName:
           Full=Protein cornichon homolog 4
           gi|28416577|gb|AAO42819.1| At1g12390 [Arabidopsis
           thaliana] gi|110743211|dbj|BAE99496.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332190753|gb|AEE28874.1| protein cornichon-4
           [Arabidopsis thaliana]
          Length = 137

 Score =  147 bits (372), Expect = 3e-33
 Identities = 66/105 (62%), Positives = 81/105 (77%)
 Frame = +3

Query: 84  DLEFDYINPYDSTTRINQVILPEFIIQGIFCFSNLIAGHWFIFLISLPCLYYNVTLYVKR 263
           DLEFDYINPYDS +RIN V+LPEFI+QG+ C   L+ GHWF+ L+ LP LYYN  LY KR
Sbjct: 30  DLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYSKR 89

Query: 264 QHLADVTEIYNKLNWEKKKRLFKVAHLVLTFVFAILSLVWTLTDD 398
           QHL DVTEI+N LNWEKKKRLFK+A++VL     I  ++++  DD
Sbjct: 90  QHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDD 134


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