BLASTX nr result

ID: Glycyrrhiza23_contig00007650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007650
         (1697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608843.1| Chromatin remodeling complex subunit [Medica...   571   e-160
ref|XP_003525534.1| PREDICTED: SWI/SNF complex component SNF12 h...   566   e-159
ref|XP_003550870.1| PREDICTED: SWI/SNF complex component SNF12 h...   564   e-158
ref|XP_002279969.1| PREDICTED: SWI/SNF complex component SNF12 h...   476   e-132
ref|XP_004136885.1| PREDICTED: SWI/SNF complex component SNF12 h...   452   e-125

>ref|XP_003608843.1| Chromatin remodeling complex subunit [Medicago truncatula]
            gi|355509898|gb|AES91040.1| Chromatin remodeling complex
            subunit [Medicago truncatula]
          Length = 528

 Score =  571 bits (1472), Expect = e-160
 Identities = 319/471 (67%), Positives = 349/471 (74%), Gaps = 5/471 (1%)
 Frame = -2

Query: 1399 PSFFGNSSIPVNPPPIHLLXXXXXXXXXXXPHFHGHFQLSQPQT--HVIAQQ-AQFPHPR 1229
            PSF   SSIPVNP PIHLL             F GHFQLSQPQ   HVI+QQ +QF +PR
Sbjct: 16   PSF---SSIPVNPQPIHLLTQSHPQMQNPS-QFPGHFQLSQPQPQPHVISQQQSQFVNPR 71

Query: 1228 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVNKLQNNNANTNXXXXXXXXXX 1049
            +                                        LQ ++              
Sbjct: 72   SHP------------------------------------QTLQQHHQQHQQQQQQQNVAS 95

Query: 1048 XXXXXXXXXAKRASQKPASRPQSSPSGNQTSAFKTMELTPAPLRKKRNSPEKEKQIPEKV 869
                      KR+  K  SRPQ SPSGNQTSAFKTMELTPAPLRKKR  PE    IPEKV
Sbjct: 96   PATASTTSSVKRSHHKANSRPQGSPSGNQTSAFKTMELTPAPLRKKRTLPEN--LIPEKV 153

Query: 868  AKLLPESALYARLLELEAQIDAALFRKKIDVQEAVRNPPSVRKTLRVYVYNTFSNQTKMD 689
            AK++PESA+Y RL+ELEAQIDAAL RKK+DVQEAV+NP SVRKTLRVYVYNTFSNQTK +
Sbjct: 154  AKIVPESAIYTRLIELEAQIDAALNRKKVDVQEAVKNPTSVRKTLRVYVYNTFSNQTK-E 212

Query: 688  SGKNDGEE-PSWSLRMTGRILEDG-KDLVVAGISQRENPLYPKFSAFFKKITIYLDQGFY 515
            SGK  G E PSWSLR+TGRILE+G KD VV GIS+R + +YPKFSAFFKKIT+YLDQGFY
Sbjct: 213  SGKVGGVELPSWSLRITGRILEEGGKDPVVGGISKRGSIVYPKFSAFFKKITVYLDQGFY 272

Query: 514  PDNHVIVWDSVRSSVQRDGFEVKRKGDKEFTAVIRMTMNDSPEKFVVSAQLSKVLGIEFD 335
            PD HVIVWDS RS VQ+DGFEVKRKGDKEFTAVIR+ +N SPEKF+VS  L+KVLGIEFD
Sbjct: 273  PDKHVIVWDSARSPVQQDGFEVKRKGDKEFTAVIRLGVNYSPEKFMVSTPLAKVLGIEFD 332

Query: 334  TRPRIVAALWHYVKSRKLQSPNDPSFFMCDASLQRVFGEEKMKFSMASQKISQHLSQPQP 155
            TRPRI+AALW+YVK RKLQSPNDPSFFMCDASLQ+VFGEEKMKFSMASQKISQHLSQPQ 
Sbjct: 333  TRPRIMAALWNYVKFRKLQSPNDPSFFMCDASLQKVFGEEKMKFSMASQKISQHLSQPQH 392

Query: 154  IHLEHKIKLSGNSPAGTTCYDVQVDVPLPLEKDMSAFLTSIEKHKEIDAFD 2
            IHLEHKIKLSGNSPAGTTCYDVQVDVPL LEKDMSAFLTS+E+HKEIDAFD
Sbjct: 393  IHLEHKIKLSGNSPAGTTCYDVQVDVPLSLEKDMSAFLTSMERHKEIDAFD 443


>ref|XP_003525534.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
          Length = 513

 Score =  566 bits (1458), Expect = e-159
 Identities = 306/472 (64%), Positives = 342/472 (72%), Gaps = 5/472 (1%)
 Frame = -2

Query: 1402 TPSFF---GNSSIPVNPPPIHLLXXXXXXXXXXXPHFHGHFQLSQPQTHVIAQQAQFPHP 1232
            TPSFF   G  SIP+N    HLL            HFHGHFQLSQPQTHV+A Q Q PHP
Sbjct: 12   TPSFFTNPGTPSIPMN----HLLSQTQPQPQGATSHFHGHFQLSQPQTHVLAPQQQ-PHP 66

Query: 1231 RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVNKLQNNNANTNXXXXXXXXX 1052
                                                        +NNANTN         
Sbjct: 67   HPHPQV--------------------------------------HNNANTNAHVAAPTPP 88

Query: 1051 XXXXXXXXXXAKRASQKPASRPQSSPSGNQTSAFKTMELTPAPLRKKRNSPEKEKQIPEK 872
                       KRASQKP SRPQ S + +Q+SAFKTMELT AP RKKR+ P   K +PEK
Sbjct: 89   -----------KRASQKPPSRPQGSSNASQSSAFKTMELTVAPPRKKRSFPYN-KVVPEK 136

Query: 871  VAKLLPESALYARLLELEAQIDAALFRKKIDVQEAVRNPPSVRKTLRVYVYNTFSNQTKM 692
            VAKL+PESA+YA+LL LE QID+AL RKKIDVQE VRNP  VRKTLRVYVYNTFSNQ K+
Sbjct: 137  VAKLVPESAIYAKLLGLETQIDSALARKKIDVQENVRNPRCVRKTLRVYVYNTFSNQVKV 196

Query: 691  DSGKNDGEEPSWSLRMTGRILEDGKDLVVAGISQRENPLYPKFSAFFKKITIYLDQGFYP 512
            + GKN  EEPSW+LR+TGR+LEDGKD V  GIS +E   YPKFSAFFKKITIYLDQG Y 
Sbjct: 197  EPGKNGVEEPSWALRITGRVLEDGKDSVAEGISTKE---YPKFSAFFKKITIYLDQGLYQ 253

Query: 511  DNHVIVWDSVRSSV--QRDGFEVKRKGDKEFTAVIRMTMNDSPEKFVVSAQLSKVLGIEF 338
            DNHV+VWDS RS+   QRDGFEVKRKGDKEFTAV+RM MN SP+KFVVS QL++VLG+EF
Sbjct: 254  DNHVVVWDSARSAAAQQRDGFEVKRKGDKEFTAVVRMAMNYSPDKFVVSPQLARVLGVEF 313

Query: 337  DTRPRIVAALWHYVKSRKLQSPNDPSFFMCDASLQRVFGEEKMKFSMASQKISQHLSQPQ 158
            D+R RI+AALWHYVK++KLQSPNDPSFFMCD SLQ+VFGE+KMKFS+ASQKISQHLSQP+
Sbjct: 314  DSRARIIAALWHYVKAKKLQSPNDPSFFMCDTSLQKVFGEDKMKFSVASQKISQHLSQPR 373

Query: 157  PIHLEHKIKLSGNSPAGTTCYDVQVDVPLPLEKDMSAFLTSIEKHKEIDAFD 2
            PIHLEHKIKLSGN PAG+TCYDVQVDVPLPLEKDMSAFL S E+HK+IDAFD
Sbjct: 374  PIHLEHKIKLSGNGPAGSTCYDVQVDVPLPLEKDMSAFLASTERHKDIDAFD 425


>ref|XP_003550870.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
          Length = 525

 Score =  564 bits (1453), Expect = e-158
 Identities = 308/477 (64%), Positives = 341/477 (71%), Gaps = 10/477 (2%)
 Frame = -2

Query: 1402 TPSFFGNS---SIPVNPPPIHLLXXXXXXXXXXXPHFHGHFQLSQPQTHVIAQQA---QF 1241
            TPSFF N    SIP+N P  HLL            HFHGHFQLSQPQTHV+AQQ    Q 
Sbjct: 20   TPSFFTNPGAPSIPMNHPQPHLLSQTQPQPQGATSHFHGHFQLSQPQTHVVAQQQHQQQQ 79

Query: 1240 PHPRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVNKLQNNNANTNXXXXXX 1061
            PHP                                            +NNANTN      
Sbjct: 80   PHPHPQV----------------------------------------HNNANTNAHVAAP 99

Query: 1060 XXXXXXXXXXXXXAKRASQKPASRPQSSPSGNQTSAFKTMELTPAPLRKKRNSPEKEKQI 881
                          KRA+QKP SRPQ S +  Q+SAFKTMELT AP RKKR+ P     I
Sbjct: 100  TPP-----------KRANQKPPSRPQGSSNATQSSAFKTMELTVAPPRKKRSFPGN--LI 146

Query: 880  PEKVAKLLPESALYARLLELEAQIDAALFRKKIDVQEAVRNPPSVRKTLRVYVYNTFSNQ 701
            PEKVAKL+PESA+YA+LLELE QID+AL RKKIDVQ  VRNP  VRKTLRVYVYNTFSNQ
Sbjct: 147  PEKVAKLVPESAIYAKLLELETQIDSALARKKIDVQANVRNPRCVRKTLRVYVYNTFSNQ 206

Query: 700  TKMDSGKNDGEEPSWSLRMTGRILEDG--KDLVVAGISQRENPLYPKFSAFFKKITIYLD 527
             K+++GKN  EEPSW+LR+TGR+LEDG  KD V  GIS +E   YPKFSAFFKKITIYLD
Sbjct: 207  VKVETGKNGVEEPSWALRITGRVLEDGNGKDSVAEGISTKE---YPKFSAFFKKITIYLD 263

Query: 526  QGFYPDNHVIVWDSVRSSV--QRDGFEVKRKGDKEFTAVIRMTMNDSPEKFVVSAQLSKV 353
            QG Y DNHV+VWDS  S+   QRDGFEVKRKGDKEFTAV+RM MN SP+KFVVS QL++V
Sbjct: 264  QGLYQDNHVVVWDSAHSAAAQQRDGFEVKRKGDKEFTAVVRMAMNYSPDKFVVSPQLARV 323

Query: 352  LGIEFDTRPRIVAALWHYVKSRKLQSPNDPSFFMCDASLQRVFGEEKMKFSMASQKISQH 173
            LG+EFD+R RI+AALWHYVK++KLQSPNDPSFFMCDASLQRVFGEEKMKFS+ASQKISQH
Sbjct: 324  LGVEFDSRCRIIAALWHYVKAKKLQSPNDPSFFMCDASLQRVFGEEKMKFSVASQKISQH 383

Query: 172  LSQPQPIHLEHKIKLSGNSPAGTTCYDVQVDVPLPLEKDMSAFLTSIEKHKEIDAFD 2
            LS PQPIHLEHKIKLSGN PAG+TCYDVQVDVPLPLEKDMSAFL S E+HK+ID FD
Sbjct: 384  LSHPQPIHLEHKIKLSGNGPAGSTCYDVQVDVPLPLEKDMSAFLASTERHKDIDTFD 440


>ref|XP_002279969.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
          Length = 546

 Score =  476 bits (1225), Expect = e-132
 Identities = 231/340 (67%), Positives = 281/340 (82%), Gaps = 1/340 (0%)
 Frame = -2

Query: 1018 KRASQKPASRPQSSPSG-NQTSAFKTMELTPAPLRKKRNSPEKEKQIPEKVAKLLPESAL 842
            KR SQKP SRP  S +  N  S FKTMELTPA  RKK   PEK  QIP+K+A L+PESA+
Sbjct: 122  KRGSQKPPSRPHGSANATNPASPFKTMELTPAARRKKPKLPEK--QIPDKIAALVPESAI 179

Query: 841  YARLLELEAQIDAALFRKKIDVQEAVRNPPSVRKTLRVYVYNTFSNQTKMDSGKNDGEEP 662
            Y +L+ELEA++DAAL RKK D+QE+++NP  V+KTLR+YV+NTF+NQT+M+  K + E P
Sbjct: 180  YTQLVELEARVDAALARKKTDIQESLKNPHRVQKTLRIYVFNTFANQTRMNPEKTNAEPP 239

Query: 661  SWSLRMTGRILEDGKDLVVAGISQRENPLYPKFSAFFKKITIYLDQGFYPDNHVIVWDSV 482
            SW+L++ GRILEDG D V+AG S + +  YPKFS+FFKK+TIYLDQG YPDNHVI+W++ 
Sbjct: 240  SWTLKIIGRILEDGVDPVLAGTSDKLSSSYPKFSSFFKKMTIYLDQGLYPDNHVILWENA 299

Query: 481  RSSVQRDGFEVKRKGDKEFTAVIRMTMNDSPEKFVVSAQLSKVLGIEFDTRPRIVAALWH 302
            RS    +GFEV+RKGDKEF A+IR+ MN  PEKF +S  LS+VLG+E DTRPRIVAA+WH
Sbjct: 300  RSPTLHEGFEVQRKGDKEFNAIIRLEMNYVPEKFKLSTALSEVLGLEVDTRPRIVAAIWH 359

Query: 301  YVKSRKLQSPNDPSFFMCDASLQRVFGEEKMKFSMASQKISQHLSQPQPIHLEHKIKLSG 122
            YVKSRKLQ+PNDPSFF+CD  L++VFGEEK+KF+M  QKIS HLS PQPIHLEHK+KLSG
Sbjct: 360  YVKSRKLQNPNDPSFFVCDPPLRKVFGEEKIKFAMVPQKISHHLSPPQPIHLEHKVKLSG 419

Query: 121  NSPAGTTCYDVQVDVPLPLEKDMSAFLTSIEKHKEIDAFD 2
            NSPAGTTCYDV VDVPLPLEK+MSAFL + E+HKEIDA+D
Sbjct: 420  NSPAGTTCYDVLVDVPLPLEKEMSAFLANTERHKEIDAYD 459


>ref|XP_004136885.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
          Length = 560

 Score =  452 bits (1164), Expect = e-125
 Identities = 221/339 (65%), Positives = 268/339 (79%)
 Frame = -2

Query: 1018 KRASQKPASRPQSSPSGNQTSAFKTMELTPAPLRKKRNSPEKEKQIPEKVAKLLPESALY 839
            KR +QKP SR   +     TS FKTMELTPAP RKK   PEK  Q+P+KVA LLPESA+Y
Sbjct: 136  KRPTQKPPSRSAGNSYTIATSPFKTMELTPAPRRKKVKLPEK--QLPDKVAALLPESAIY 193

Query: 838  ARLLELEAQIDAALFRKKIDVQEAVRNPPSVRKTLRVYVYNTFSNQTKMDSGKNDGEEPS 659
             +LLE+E +IDAAL RKK D+QE+++NPP ++KTLR+YV+NTF NQ +  S + + E PS
Sbjct: 194  TQLLEVEGRIDAALARKKNDIQESLKNPPRIQKTLRIYVFNTFENQNQSGSDQKNVESPS 253

Query: 658  WSLRMTGRILEDGKDLVVAGISQRENPLYPKFSAFFKKITIYLDQGFYPDNHVIVWDSVR 479
            WSL++ GRILEDGKD V+AG  Q  +  YPKFS+FFKKITIYLDQ  YPDNH I+W+  R
Sbjct: 254  WSLKIIGRILEDGKDPVIAGAMQNYDSTYPKFSSFFKKITIYLDQSLYPDNHTILWEGAR 313

Query: 478  SSVQRDGFEVKRKGDKEFTAVIRMTMNDSPEKFVVSAQLSKVLGIEFDTRPRIVAALWHY 299
            S   ++GFEVKRKGDKEFTAVIR+ MN +PEKF +S  LS VLGIE DTR RI+AALWHY
Sbjct: 314  SPALQEGFEVKRKGDKEFTAVIRLDMNHTPEKFRLSPSLSDVLGIETDTRSRIMAALWHY 373

Query: 298  VKSRKLQSPNDPSFFMCDASLQRVFGEEKMKFSMASQKISQHLSQPQPIHLEHKIKLSGN 119
            VK+ KLQ+ +DPSFF CD  L++VFGEEK+KFSM +QKISQHL  PQPI+L+H++K+SGN
Sbjct: 374  VKANKLQNSSDPSFFTCDPGLRKVFGEEKVKFSMVTQKISQHLIPPQPINLQHRVKISGN 433

Query: 118  SPAGTTCYDVQVDVPLPLEKDMSAFLTSIEKHKEIDAFD 2
            SP GTTCYDV VDVP P EK MSAFL + EKHK+ID+ D
Sbjct: 434  SPVGTTCYDVMVDVPFPTEKQMSAFLENFEKHKDIDSCD 472


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