BLASTX nr result

ID: Glycyrrhiza23_contig00007566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007566
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523403.1| PREDICTED: psbP domain-containing protein 4,...   250   8e-91
gb|ACU23933.1| unknown [Glycine max]                                  247   7e-90
ref|XP_003602125.1| PsbP domain-containing protein [Medicago tru...   247   6e-88
ref|XP_003526671.1| PREDICTED: psbP domain-containing protein 4,...   250   2e-87
gb|ACJ85379.1| unknown [Medicago truncatula]                          247   4e-87

>ref|XP_003523403.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
           [Glycine max]
          Length = 267

 Score =  250 bits (639), Expect(2) = 8e-91
 Identities = 125/145 (86%), Positives = 131/145 (90%)
 Frame = +3

Query: 540 YTFSXXXXXXXXXXSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFADNLGDDATIEKIG 719
           Y+F           SIADLGGTEIDLRFASSKEGRLFVIVAPVLRF+D+LGD+ATIEKIG
Sbjct: 123 YSFRVPEEWEEVPVSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSDDLGDNATIEKIG 182

Query: 720 TPDKVINAFGPEVIGENVEGKVLSASVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG 899
            P+KVINAFGPE+IGENVEGKVLS S AEHEGRTYYQFELEPPHIFITATAAGNRLYLFG
Sbjct: 183 PPEKVINAFGPEMIGENVEGKVLSVSAAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG 242

Query: 900 VTGSGLQWKRHYNDLKKIAESFRVV 974
           VTGSGLQWKRHYNDLKKIAESFRVV
Sbjct: 243 VTGSGLQWKRHYNDLKKIAESFRVV 267



 Score =  111 bits (277), Expect(2) = 8e-91
 Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
 Frame = +2

Query: 182 WRNPQHMHI-QPSSQPPCHSSTQNGILRTVAASFSKDSFLVNGESKKCSPLLVNRRTVLA 358
           WRNPQHMHI  PSSQ     + QNG LRTVAAS SKD   ++ ES KCS LLVNRRT+LA
Sbjct: 13  WRNPQHMHIISPSSQ-----TLQNGTLRTVAASASKD---ISIESDKCSSLLVNRRTILA 64

Query: 359 SGFCLLGFPGVSLALVKQGPLAGRIPGLSE 448
           SG  LL FPG SLA+VKQG LAGRIPGLSE
Sbjct: 65  SGVSLLSFPGESLAVVKQGLLAGRIPGLSE 94


>gb|ACU23933.1| unknown [Glycine max]
          Length = 267

 Score =  247 bits (631), Expect(2) = 7e-90
 Identities = 123/145 (84%), Positives = 129/145 (88%)
 Frame = +3

Query: 540 YTFSXXXXXXXXXXSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFADNLGDDATIEKIG 719
           Y+F           SIADLGGTEIDLRFASSKEGRLFVIVAPVLRF+D+LGD+ATIEKIG
Sbjct: 123 YSFRVPEEWEEVPVSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSDDLGDNATIEKIG 182

Query: 720 TPDKVINAFGPEVIGENVEGKVLSASVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG 899
            P+KVINAFGPE+IGENVEGKVLS   AEHEGRTYYQFELEPPHIFITATAAGNRLYLFG
Sbjct: 183 PPEKVINAFGPEMIGENVEGKVLSVGAAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG 242

Query: 900 VTGSGLQWKRHYNDLKKIAESFRVV 974
           VTGSG QWKRHYNDLKKIAESFRVV
Sbjct: 243 VTGSGFQWKRHYNDLKKIAESFRVV 267



 Score =  111 bits (277), Expect(2) = 7e-90
 Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
 Frame = +2

Query: 182 WRNPQHMHI-QPSSQPPCHSSTQNGILRTVAASFSKDSFLVNGESKKCSPLLVNRRTVLA 358
           WRNPQHMHI  PSSQ     + QNG LRTVAAS SKD   ++ ES KCS LLVNRRT+LA
Sbjct: 13  WRNPQHMHIISPSSQ-----TLQNGTLRTVAASASKD---ISIESDKCSSLLVNRRTILA 64

Query: 359 SGFCLLGFPGVSLALVKQGPLAGRIPGLSE 448
           SG  LL FPG SLA+VKQG LAGRIPGLSE
Sbjct: 65  SGVSLLSFPGESLAVVKQGLLAGRIPGLSE 94


>ref|XP_003602125.1| PsbP domain-containing protein [Medicago truncatula]
           gi|355491173|gb|AES72376.1| PsbP domain-containing
           protein [Medicago truncatula]
          Length = 268

 Score =  247 bits (630), Expect(2) = 6e-88
 Identities = 121/145 (83%), Positives = 132/145 (91%)
 Frame = +3

Query: 540 YTFSXXXXXXXXXXSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFADNLGDDATIEKIG 719
           YTF           SIADLGGTE+DLRF+SSKEGRLFVIVAPVLRF+D +GDDATIEKIG
Sbjct: 124 YTFKVPQEWEEVPVSIADLGGTELDLRFSSSKEGRLFVIVAPVLRFSDIIGDDATIEKIG 183

Query: 720 TPDKVINAFGPEVIGENVEGKVLSASVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG 899
            PDKVI+AFGPE+IGENVEGKVLS++VAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG
Sbjct: 184 PPDKVISAFGPEMIGENVEGKVLSSNVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG 243

Query: 900 VTGSGLQWKRHYNDLKKIAESFRVV 974
           VTG+GLQWKRHYNDLKKI++SFRVV
Sbjct: 244 VTGNGLQWKRHYNDLKKISDSFRVV 268



 Score =  105 bits (261), Expect(2) = 6e-88
 Identities = 57/88 (64%), Positives = 64/88 (72%)
 Frame = +2

Query: 185 RNPQHMHIQPSSQPPCHSSTQNGILRTVAASFSKDSFLVNGESKKCSPLLVNRRTVLASG 364
           RNPQHM+IQP S        +N + RT+ AS S DS  +N ES KCS LL NRR +LASG
Sbjct: 15  RNPQHMYIQPCS-------VKNEVSRTMHASVSIDSLSINEESDKCSSLLANRRAILASG 67

Query: 365 FCLLGFPGVSLALVKQGPLAGRIPGLSE 448
             LLGFPGVSLA+VKQG LAGRIPGLSE
Sbjct: 68  VSLLGFPGVSLAVVKQGLLAGRIPGLSE 95


>ref|XP_003526671.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
           [Glycine max]
          Length = 271

 Score =  250 bits (639), Expect(2) = 2e-87
 Identities = 125/145 (86%), Positives = 133/145 (91%)
 Frame = +3

Query: 540 YTFSXXXXXXXXXXSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFADNLGDDATIEKIG 719
           Y+F           SIADLGGTEIDLRFASSKEGRLFVIVAPVLRF+D+LGD+ATIEKIG
Sbjct: 127 YSFRVPKEWEEVPVSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSDDLGDNATIEKIG 186

Query: 720 TPDKVINAFGPEVIGENVEGKVLSASVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG 899
            P+KVINAFGPE+IGENVEGKVLSA+VAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG
Sbjct: 187 PPEKVINAFGPEMIGENVEGKVLSANVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG 246

Query: 900 VTGSGLQWKRHYNDLKKIAESFRVV 974
           VTGSGLQWKRHY+DLKKIAESFRVV
Sbjct: 247 VTGSGLQWKRHYDDLKKIAESFRVV 271



 Score = 99.8 bits (247), Expect(2) = 2e-87
 Identities = 62/90 (68%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
 Frame = +2

Query: 185 RNPQHMHI-QPSSQPPCHSSTQNGILRT-VAASFSKDSFLVNGESKKCSPLLVNRRTVLA 358
           R PQHMHI  PSSQ     + QNG LRT V AS SKD+  +  E K CS LLVNRRTVLA
Sbjct: 15  RKPQHMHIILPSSQ-----TLQNGTLRTDVTASASKDNISIESE-KCCSSLLVNRRTVLA 68

Query: 359 SGFCLLGFPGVSLALVKQGPLAGRIPGLSE 448
           SG  LLGFPG SLA+VKQG LAGRIPGLSE
Sbjct: 69  SGVSLLGFPGESLAVVKQGLLAGRIPGLSE 98


>gb|ACJ85379.1| unknown [Medicago truncatula]
          Length = 268

 Score =  247 bits (630), Expect(2) = 4e-87
 Identities = 121/145 (83%), Positives = 132/145 (91%)
 Frame = +3

Query: 540 YTFSXXXXXXXXXXSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFADNLGDDATIEKIG 719
           YTF           SIADLGGTE+DLRF+SSKEGRLFVIVAPVLRF+D +GDDATIEKIG
Sbjct: 124 YTFKVPQEWEEVPVSIADLGGTELDLRFSSSKEGRLFVIVAPVLRFSDIIGDDATIEKIG 183

Query: 720 TPDKVINAFGPEVIGENVEGKVLSASVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG 899
            PDKVI+AFGPE+IGENVEGKVLS++VAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG
Sbjct: 184 PPDKVISAFGPEMIGENVEGKVLSSNVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFG 243

Query: 900 VTGSGLQWKRHYNDLKKIAESFRVV 974
           VTG+GLQWKRHYNDLKKI++SFRVV
Sbjct: 244 VTGNGLQWKRHYNDLKKISDSFRVV 268



 Score =  102 bits (254), Expect(2) = 4e-87
 Identities = 56/88 (63%), Positives = 63/88 (71%)
 Frame = +2

Query: 185 RNPQHMHIQPSSQPPCHSSTQNGILRTVAASFSKDSFLVNGESKKCSPLLVNRRTVLASG 364
           RNPQHM+IQP S        +N + RT+ AS S  S  +N ES KCS LL NRR +LASG
Sbjct: 15  RNPQHMYIQPCS-------VKNEVSRTMHASVSIGSLSINEESDKCSSLLANRRAILASG 67

Query: 365 FCLLGFPGVSLALVKQGPLAGRIPGLSE 448
             LLGFPGVSLA+VKQG LAGRIPGLSE
Sbjct: 68  VSLLGFPGVSLAVVKQGLLAGRIPGLSE 95


Top