BLASTX nr result

ID: Glycyrrhiza23_contig00007562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007562
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   357   3e-96
ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   353   4e-95
ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   315   9e-84
emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]   313   4e-83
ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   312   7e-83

>ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 317

 Score =  357 bits (916), Expect = 3e-96
 Identities = 179/216 (82%), Positives = 198/216 (91%)
 Frame = +1

Query: 103 KVSTSNDAGRLYVGNLPFSMTPSQLSEIFGEAGNVVSVEMVYDRVTNRSRGFAFVTMGSV 282
           KVS SNDAGRLYVGNLP+S+T S+L E+FGEAG V SVE+VYDRVT+RSRGFAFVTMGSV
Sbjct: 100 KVSDSNDAGRLYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSV 159

Query: 283 EDAKEAIRMFDGSQVGGRSAKVNFPEVPKGGERLVMGPKIRNSYKGFVDSPHKIYAGNLG 462
           EDAKEAIRMFDGSQVGGR+ KVNFPEVPKGGERLVMG KI NSY+GFVDSPHKIYAGNLG
Sbjct: 160 EDAKEAIRMFDGSQVGGRTVKVNFPEVPKGGERLVMGSKILNSYRGFVDSPHKIYAGNLG 219

Query: 463 WGMTSQDLRDAFAEQPGLLSAKVIYERDSGRSRGFGFVTFETAENVQAALNTMNGVEVQG 642
           WG+TSQ LR+AFAEQPG+LSAKVIYERDSGRSRGFGFV+FETAE+ +AAL+ MNGVEVQG
Sbjct: 220 WGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESARAALDIMNGVEVQG 279

Query: 643 RPLRLNLAAERTPSSRRVIKENTESNADSSELLSSA 750
           RPLRLNLA  RTPSS  VI++N  SN +SSEL+SSA
Sbjct: 280 RPLRLNLAEARTPSSPPVIQKNVGSNVESSELVSSA 315


>ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 314

 Score =  353 bits (906), Expect = 4e-95
 Identities = 177/216 (81%), Positives = 197/216 (91%)
 Frame = +1

Query: 103 KVSTSNDAGRLYVGNLPFSMTPSQLSEIFGEAGNVVSVEMVYDRVTNRSRGFAFVTMGSV 282
           KVS S DAGRLYVGNLP+S+T S L+E+FGEAG V SVE++YDRVT+RSRGFAFVTMG+V
Sbjct: 97  KVSDSYDAGRLYVGNLPYSITNSALAELFGEAGTVASVEIMYDRVTDRSRGFAFVTMGNV 156

Query: 283 EDAKEAIRMFDGSQVGGRSAKVNFPEVPKGGERLVMGPKIRNSYKGFVDSPHKIYAGNLG 462
           EDAKEAIRMFDGSQVGGR+ KVNFPEVPKGGERLVMG KIRNSY+GFVDSPHKIYAGNLG
Sbjct: 157 EDAKEAIRMFDGSQVGGRTVKVNFPEVPKGGERLVMGSKIRNSYRGFVDSPHKIYAGNLG 216

Query: 463 WGMTSQDLRDAFAEQPGLLSAKVIYERDSGRSRGFGFVTFETAENVQAALNTMNGVEVQG 642
           WG+TSQ LR+AFAEQPG+LSAKVIYERDSGRSRGFGFV+FETAE+ QAAL+ MNGVEVQG
Sbjct: 217 WGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESAQAALDIMNGVEVQG 276

Query: 643 RPLRLNLAAERTPSSRRVIKENTESNADSSELLSSA 750
           RPLRLNLA  R PSS  VI++N  SN +SSEL+SSA
Sbjct: 277 RPLRLNLAEARAPSSPPVIQKNVGSNVESSELVSSA 312


>ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 311

 Score =  315 bits (808), Expect = 9e-84
 Identities = 157/215 (73%), Positives = 185/215 (86%)
 Frame = +1

Query: 103 KVSTSNDAGRLYVGNLPFSMTPSQLSEIFGEAGNVVSVEMVYDRVTNRSRGFAFVTMGSV 282
           KVS S +A RLYVGNLP+SMT SQL ++F EAG+V+SVE+VYDRVT+RSRGFAFVTMGSV
Sbjct: 95  KVSDSAEASRLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSV 154

Query: 283 EDAKEAIRMFDGSQVGGRSAKVNFPEVPKGGERLVMGPKIRNSYKGFVDSPHKIYAGNLG 462
           ++AKEAIRMFDGSQVGGR+ KVNFPEVP+GGER VMGPKIR+SY+GFVDSP+KIYAGNL 
Sbjct: 155 QEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLS 214

Query: 463 WGMTSQDLRDAFAEQPGLLSAKVIYERDSGRSRGFGFVTFETAENVQAALNTMNGVEVQG 642
           W +TS+ LRDAFA+ PGLL AKVIYER+SGRSRGFGF++F +AEN ++ALN MN VEV+G
Sbjct: 215 WRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEG 274

Query: 643 RPLRLNLAAERTPSSRRVIKENTESNADSSELLSS 747
           RPLRLNLAA R P +        E N D+SEL+SS
Sbjct: 275 RPLRLNLAAVRAPPAPSP-GPGLERNVDNSELISS 308


>emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
          Length = 454

 Score =  313 bits (802), Expect = 4e-83
 Identities = 156/215 (72%), Positives = 184/215 (85%)
 Frame = +1

Query: 103 KVSTSNDAGRLYVGNLPFSMTPSQLSEIFGEAGNVVSVEMVYDRVTNRSRGFAFVTMGSV 282
           KVS S +A RLYVGNLP+SMT SQL  +F EAG+V+SVE+VYDRVT+RSRGFAFVTMGSV
Sbjct: 238 KVSDSAEASRLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSV 297

Query: 283 EDAKEAIRMFDGSQVGGRSAKVNFPEVPKGGERLVMGPKIRNSYKGFVDSPHKIYAGNLG 462
           ++AKEAIRMFDGSQVGGR+ KVNFPEVP+GGER VMGPKIR+SY+GFVDSP+KIYAGNL 
Sbjct: 298 QEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLS 357

Query: 463 WGMTSQDLRDAFAEQPGLLSAKVIYERDSGRSRGFGFVTFETAENVQAALNTMNGVEVQG 642
           W +TS+ LRDAFA+ PGLL AKVIYER+SGRSRGFGF++F +AEN ++ALN M+ VEV+G
Sbjct: 358 WRLTSEGLRDAFADXPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMBEVEVEG 417

Query: 643 RPLRLNLAAERTPSSRRVIKENTESNADSSELLSS 747
           RPLRLNLAA R P +        E N D+SEL+SS
Sbjct: 418 RPLRLNLAAVRAPPAPSP-GPGLERNVDNSELISS 451


>ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449528229|ref|XP_004171108.1| PREDICTED: 33
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 323

 Score =  312 bits (800), Expect = 7e-83
 Identities = 149/215 (69%), Positives = 187/215 (86%)
 Frame = +1

Query: 103 KVSTSNDAGRLYVGNLPFSMTPSQLSEIFGEAGNVVSVEMVYDRVTNRSRGFAFVTMGSV 282
           KVS S +AG+LY+GNLP++MT SQLSE+F EAG+VVSV+++YD+VT+RSRGFAFVTM ++
Sbjct: 107 KVSVSREAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATL 166

Query: 283 EDAKEAIRMFDGSQVGGRSAKVNFPEVPKGGERLVMGPKIRNSYKGFVDSPHKIYAGNLG 462
           E+AKEAIRMFDGSQ+GGR+ +VNFPEVP+GGE+ VMGP+IR+SY  FVDSPHKIYAGNLG
Sbjct: 167 EEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLG 226

Query: 463 WGMTSQDLRDAFAEQPGLLSAKVIYERDSGRSRGFGFVTFETAENVQAALNTMNGVEVQG 642
           WG+TSQ LRDAF  QPG+LSAK+IY+R SG+SRGFGFV+FETAE+ ++AL +MNGVEV+G
Sbjct: 227 WGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEG 286

Query: 643 RPLRLNLAAERTPSSRRVIKENTESNADSSELLSS 747
           RPLRLN+AA ++P S       TE+  D  ELL+S
Sbjct: 287 RPLRLNIAAGQSPISPAAF-PRTENTIDGKELLTS 320


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