BLASTX nr result

ID: Glycyrrhiza23_contig00007494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007494
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like...   115   2e-23
ref|XP_003546755.1| PREDICTED: 60S ribosomal protein L18a-1-like...   111   2e-22
gb|ABU98949.1| unknown [Lupinus albus]                                102   2e-19
ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ...    86   2e-14
ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like...    82   3e-13

>ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like [Glycine max]
          Length = 160

 Score =  115 bits (288), Expect = 2e-23
 Identities = 70/163 (42%), Positives = 74/163 (45%)
 Frame = -1

Query: 866 MTEEDKPKAFSGDXXXXXXXXXXXXXXXXYGTFQGVSNYPPPRPDXXXXXXXXXXXXXXX 687
           MT+EDKPKAFSG                 YGTFQGV+NYPPP+P                
Sbjct: 1   MTDEDKPKAFSGGHHNHPPPQPQPFPAAQYGTFQGVANYPPPQPHPAIGFPHPVPPPGAV 60

Query: 686 XXXXXXXXXXXXXXXXXAVPGYAVAEGRPVREXXXXXXXXXXXXXXXXXGFFLAGIPWYV 507
                             VPGYAVAEGRPVRE                 GFFLAGIPWYV
Sbjct: 61  DSSAPPPPYYPGYQA---VPGYAVAEGRPVRERRLGCCGLGCGWCLFILGFFLAGIPWYV 117

Query: 506 GAIIMLCSRVDYREKPGYVXXXXXXXXXXXXXXXXXXXXADDW 378
           GAIIMLCSRVDYREKPGY+                     DDW
Sbjct: 118 GAIIMLCSRVDYREKPGYIACVVAAVLGTIAIILGVTEGVDDW 160


>ref|XP_003546755.1| PREDICTED: 60S ribosomal protein L18a-1-like [Glycine max]
          Length = 161

 Score =  111 bits (278), Expect = 2e-22
 Identities = 70/163 (42%), Positives = 73/163 (44%)
 Frame = -1

Query: 866 MTEEDKPKAFSGDXXXXXXXXXXXXXXXXYGTFQGVSNYPPPRPDXXXXXXXXXXXXXXX 687
           MT+EDKPKAFSG                 YGTFQGV+NYPPP                  
Sbjct: 1   MTDEDKPKAFSGHHHHPPPPQPQPFPAAQYGTFQGVANYPPP--PQPHPAIGFPHPVPPP 58

Query: 686 XXXXXXXXXXXXXXXXXAVPGYAVAEGRPVREXXXXXXXXXXXXXXXXXGFFLAGIPWYV 507
                            AVPGYAVAEGRPVRE                 GFFLAGIPWYV
Sbjct: 59  GAADSSAPPPPYYPGYQAVPGYAVAEGRPVRERHLGCCGLGCGWCLFILGFFLAGIPWYV 118

Query: 506 GAIIMLCSRVDYREKPGYVXXXXXXXXXXXXXXXXXXXXADDW 378
           GAIIMLCSRVDYREKPGY+                     DDW
Sbjct: 119 GAIIMLCSRVDYREKPGYIACVVAAVLGTIAIILGVTKGVDDW 161


>gb|ABU98949.1| unknown [Lupinus albus]
          Length = 163

 Score =  102 bits (253), Expect = 2e-19
 Identities = 64/140 (45%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
 Frame = -1

Query: 866 MTEEDKPKA-FSGDXXXXXXXXXXXXXXXXYGTFQGVSNYPPPRPDXXXXXXXXXXXXXX 690
           MTEEDKP                       YGTFQGVSNYPPP PD              
Sbjct: 1   MTEEDKPAVVLHHHHQPPPLSYPQPYPPPQYGTFQGVSNYPPPPPDLHPAIGFPQPAPPH 60

Query: 689 XXXXXXXXXXXXXXXXXXAVPGYAVAEGRPVREXXXXXXXXXXXXXXXXXGFFLAGIPWY 510
                             AVPGYAVAEGRPV E                 GF LAGIPWY
Sbjct: 61  GFTNQSPPPPPYYTHGYQAVPGYAVAEGRPVSERRLPFCGLGCGWFLFMFGFLLAGIPWY 120

Query: 509 VGAIIMLCSRVDYREKPGYV 450
           VGAI+MLCSRVDYREKPGYV
Sbjct: 121 VGAILMLCSRVDYREKPGYV 140


>ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis]
           gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a,
           plant, putative [Ricinus communis]
          Length = 166

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 52/133 (39%), Positives = 56/133 (42%)
 Frame = -1

Query: 776 GTFQGVSNYPPPRPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGYAVAEGRPV 597
           GTFQGV+NYPPP P                                  VPGYAVAEGRPV
Sbjct: 39  GTFQGVANYPPPHPPQHPVIGFPQPVPPPGASEPPAYPHGYQT-----VPGYAVAEGRPV 93

Query: 596 REXXXXXXXXXXXXXXXXXGFFLAGIPWYVGAIIMLCSRVDYREKPGYVXXXXXXXXXXX 417
           RE                 GFFL  IPWYVG  I+LC+R+D REKPGYV           
Sbjct: 94  RERRLPCCGIGVGWFLFIIGFFLGAIPWYVGLFILLCARIDPREKPGYVACTIAAVLATI 153

Query: 416 XXXXXXXXXADDW 378
                    ADDW
Sbjct: 154 AIVLGATKGADDW 166


>ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like [Cucumis sativus]
           gi|449524020|ref|XP_004169021.1| PREDICTED: 60S
           ribosomal protein L18a-1-like [Cucumis sativus]
          Length = 153

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 47/109 (43%), Positives = 52/109 (47%)
 Frame = -1

Query: 776 GTFQGVSNYPPPRPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGYAVAEGRPV 597
           GTFQGV+NYPP                                    AVPGYA+ EGRPV
Sbjct: 28  GTFQGVANYPP-------VGFSHPTRLPGVPDSDDPSQYQHYAHGYQAVPGYAIVEGRPV 80

Query: 596 REXXXXXXXXXXXXXXXXXGFFLAGIPWYVGAIIMLCSRVDYREKPGYV 450
           RE                 GFFLA IPWY GAI+++C RVDYREKPGYV
Sbjct: 81  REPRLPCCGIGIGWFLFIIGFFLAAIPWYAGAILIICGRVDYREKPGYV 129


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