BLASTX nr result

ID: Glycyrrhiza23_contig00007433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007433
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241583.1| uncharacterized protein LOC100794614 [Glycin...   188   2e-45
ref|XP_003527275.1| PREDICTED: RING-H2 finger protein ATL80-like...   180   5e-43
ref|XP_003603861.1| RING-H2 finger protein ATL1B [Medicago trunc...   172   1e-40
ref|XP_002306993.1| predicted protein [Populus trichocarpa] gi|2...   150   4e-34
ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   150   4e-34

>ref|NP_001241583.1| uncharacterized protein LOC100794614 [Glycine max]
           gi|255645817|gb|ACU23399.1| unknown [Glycine max]
          Length = 184

 Score =  188 bits (478), Expect = 2e-45
 Identities = 111/192 (57%), Positives = 112/192 (58%)
 Frame = -2

Query: 941 MTRPFRYLGERNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVARCGCXXXXXXXX 762
           MTR  RYLGERN                                  VARCGC        
Sbjct: 1   MTRALRYLGERNSSTDSAVVDSDFVVILAALLCALICVLGLV---AVARCGCLRRLRLSS 57

Query: 761 XXXXXXXXXXXXXANKGVKKKVLRSLPKLTATAESAVKFSDCAICLTEFAAGDEIRVLPQ 582
                         NKGVKKKVLRSLPKLTATAESAVKF+DCAICLTEFAAGDEIRVLPQ
Sbjct: 58  SATTPQSPTSAA--NKGVKKKVLRSLPKLTATAESAVKFADCAICLTEFAAGDEIRVLPQ 115

Query: 581 CGHGFHVSCIDAWLRSHSSCPSCRQILAPVSRCDKCGGFXXXXXXXXXXXXXXXXXXARF 402
           CGHGFHVSCIDAWLRSHSSCPSCRQIL  VSRCDKCGG                   ARF
Sbjct: 116 CGHGFHVSCIDAWLRSHSSCPSCRQILV-VSRCDKCGGI--PAPASSSSDPPPPDSEARF 172

Query: 401 KVREDDANRFLP 366
           K REDDANRFLP
Sbjct: 173 KGREDDANRFLP 184


>ref|XP_003527275.1| PREDICTED: RING-H2 finger protein ATL80-like [Glycine max]
          Length = 184

 Score =  180 bits (457), Expect = 5e-43
 Identities = 105/192 (54%), Positives = 109/192 (56%)
 Frame = -2

Query: 941 MTRPFRYLGERNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVARCGCXXXXXXXX 762
           MTR  RYLGERN                                  V RCGC        
Sbjct: 1   MTRALRYLGERNSATDSAVVDSDFVVIFAALLCALICILGLV---AVTRCGCLRRLRLSS 57

Query: 761 XXXXXXXXXXXXXANKGVKKKVLRSLPKLTATAESAVKFSDCAICLTEFAAGDEIRVLPQ 582
                         NKGVKKKVLRSLPK+TA+AESAVKF+DCAICLTEFAAGDEIRVLPQ
Sbjct: 58  SNATPQPPPASA--NKGVKKKVLRSLPKVTASAESAVKFADCAICLTEFAAGDEIRVLPQ 115

Query: 581 CGHGFHVSCIDAWLRSHSSCPSCRQILAPVSRCDKCGGFXXXXXXXXXXXXXXXXXXARF 402
           CGHGFHVSCIDAWLRSHSSCPSCRQIL  VSRCDKCGG                    R 
Sbjct: 116 CGHGFHVSCIDAWLRSHSSCPSCRQILV-VSRCDKCGGI--PAPASSSSAPPLADSGDRL 172

Query: 401 KVREDDANRFLP 366
           K RE+DANRFLP
Sbjct: 173 KGREEDANRFLP 184


>ref|XP_003603861.1| RING-H2 finger protein ATL1B [Medicago truncatula]
           gi|355492909|gb|AES74112.1| RING-H2 finger protein ATL1B
           [Medicago truncatula]
          Length = 193

 Score =  172 bits (437), Expect = 1e-40
 Identities = 95/160 (59%), Positives = 97/160 (60%), Gaps = 2/160 (1%)
 Frame = -2

Query: 941 MTRPFRYLGERNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVA--RCGCXXXXXX 768
           MTRPFR+LGE N                                  VA  RCGC      
Sbjct: 1   MTRPFRFLGELNSSSSDSPESSTVVDSDFVVILAALLCALICVLGLVAVTRCGCLRRLRL 60

Query: 767 XXXXXXXXXXXXXXXANKGVKKKVLRSLPKLTATAESAVKFSDCAICLTEFAAGDEIRVL 588
                          ANKGVKKKVLRSLPKLTAT ESAVKFSDCAICL+EF AGDEIRVL
Sbjct: 61  SSTTNNTSPAAPPAAANKGVKKKVLRSLPKLTATEESAVKFSDCAICLSEFTAGDEIRVL 120

Query: 587 PQCGHGFHVSCIDAWLRSHSSCPSCRQILAPVSRCDKCGG 468
           PQCGHGFHVSCID WLRSHSSCPSCRQIL  VSRCDKCGG
Sbjct: 121 PQCGHGFHVSCIDLWLRSHSSCPSCRQILV-VSRCDKCGG 159


>ref|XP_002306993.1| predicted protein [Populus trichocarpa] gi|222856442|gb|EEE93989.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  150 bits (380), Expect = 4e-34
 Identities = 77/118 (65%), Positives = 82/118 (69%)
 Frame = -2

Query: 719 NKGVKKKVLRSLPKLTATAESAVKFSDCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWL 540
           NKG+KKK LRSLPK T + +SA KFSDCAICLTEF+ GDEIRVLPQCGHGFHV+CID WL
Sbjct: 47  NKGLKKKTLRSLPKQTFSEDSAGKFSDCAICLTEFSVGDEIRVLPQCGHGFHVACIDTWL 106

Query: 539 RSHSSCPSCRQILAPVSRCDKCGGFXXXXXXXXXXXXXXXXXXARFKVREDDANRFLP 366
            SHSSCPSCRQIL  V RC KCGG                      K  EDDANRFLP
Sbjct: 107 GSHSSCPSCRQILM-VDRCQKCGGLPSGSSSISGGGGAETEAG--LKECEDDANRFLP 161


>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score =  150 bits (380), Expect = 4e-34
 Identities = 75/118 (63%), Positives = 82/118 (69%)
 Frame = -2

Query: 719 NKGVKKKVLRSLPKLTATAESAVKFSDCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWL 540
           NKG+KKK+LRSLPK+T  AE+A   +DCAICLTEF  GDEIRVLPQCGHGFHV CID WL
Sbjct: 74  NKGLKKKILRSLPKVTYAAETAGNLTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDTWL 133

Query: 539 RSHSSCPSCRQILAPVSRCDKCGGFXXXXXXXXXXXXXXXXXXARFKVREDDANRFLP 366
            SH SCPSCRQIL  V+RC KCGG                   +R K REDD NRFLP
Sbjct: 134 GSHCSCPSCRQILV-VARCQKCGG------VPASSSSTGAETESRLKEREDDVNRFLP 184


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