BLASTX nr result

ID: Glycyrrhiza23_contig00007395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007395
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540529.1| PREDICTED: zinc finger CCCH domain-containin...   101   7e-20
ref|XP_003542851.1| PREDICTED: zinc finger CCCH domain-containin...   100   2e-19
ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin...    90   2e-16
gb|ADE74631.1| unknown [Vitis vinifera]                                90   2e-16
ref|XP_002314035.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16

>ref|XP_003540529.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Glycine max]
          Length = 704

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/53 (92%), Positives = 52/53 (98%)
 Frame = +2

Query: 257 MKNLTVNTEDSFSSLLELASNNDIEGFKLLLEKEGSSINEVGLWYGRQNGSKQ 415
           MK+LTVNTEDSFSSLLELASNNDIEGFK+LLEK+ SSINEVGLWYGRQNGSKQ
Sbjct: 1   MKSLTVNTEDSFSSLLELASNNDIEGFKVLLEKDSSSINEVGLWYGRQNGSKQ 53


>ref|XP_003542851.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           isoform 1 [Glycine max] gi|356548931|ref|XP_003542852.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           30-like isoform 2 [Glycine max]
          Length = 701

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/53 (90%), Positives = 52/53 (98%)
 Frame = +2

Query: 257 MKNLTVNTEDSFSSLLELASNNDIEGFKLLLEKEGSSINEVGLWYGRQNGSKQ 415
           MK+LTVNTEDSFSSLLELASNNDIEGFK+LLEK+ S+INEVGLWYGRQNGSKQ
Sbjct: 1   MKSLTVNTEDSFSSLLELASNNDIEGFKVLLEKDSSTINEVGLWYGRQNGSKQ 53


>ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis
           vinifera]
          Length = 740

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/69 (63%), Positives = 55/69 (79%)
 Frame = +2

Query: 212 TSSL*AVQVSTNDKDMKNLTVNTEDSFSSLLELASNNDIEGFKLLLEKEGSSINEVGLWY 391
           +SS  + +  TN  DM +LTV TEDSFSSL ELA+NND++GFK  LE++ S+INEVGLWY
Sbjct: 13  SSSPSSTESKTNTIDMNHLTVETEDSFSSLHELAANNDVDGFKRSLERDASAINEVGLWY 72

Query: 392 GRQNGSKQI 418
           GRQ GSKQ+
Sbjct: 73  GRQKGSKQM 81


>gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/69 (63%), Positives = 55/69 (79%)
 Frame = +2

Query: 212 TSSL*AVQVSTNDKDMKNLTVNTEDSFSSLLELASNNDIEGFKLLLEKEGSSINEVGLWY 391
           +SS  + +  TN  DM +LTV TEDSFSSL ELA+NND++GFK  LE++ S+INEVGLWY
Sbjct: 13  SSSPSSTESKTNTIDMNHLTVETEDSFSSLHELAANNDVDGFKRSLERDASAINEVGLWY 72

Query: 392 GRQNGSKQI 418
           GRQ GSKQ+
Sbjct: 73  GRQKGSKQM 81


>ref|XP_002314035.1| predicted protein [Populus trichocarpa] gi|222850443|gb|EEE87990.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/72 (63%), Positives = 54/72 (75%)
 Frame = +2

Query: 203 STLTSSL*AVQVSTNDKDMKNLTVNTEDSFSSLLELASNNDIEGFKLLLEKEGSSINEVG 382
           S  TS+   V+ S   K+M  LTV TEDSFSSLLELA+NND+EGFK  +E++ SSI EVG
Sbjct: 11  SPSTSTPSTVENSPITKEMNCLTVETEDSFSSLLELAANNDVEGFKRFIEQDASSIKEVG 70

Query: 383 LWYGRQNGSKQI 418
            WYGRQ GSKQI
Sbjct: 71  FWYGRQKGSKQI 82


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