BLASTX nr result

ID: Glycyrrhiza23_contig00007328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007328
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597428.1| RNA-binding protein [Medicago truncatula] gi...   293   3e-77
ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding prote...   291   2e-76
ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding prote...   288   1e-75
ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding prote...   264   2e-68
ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding prote...   261   1e-67

>ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
           gi|355486476|gb|AES67679.1| RNA-binding protein
           [Medicago truncatula]
          Length = 428

 Score =  293 bits (751), Expect = 3e-77
 Identities = 153/209 (73%), Positives = 168/209 (80%), Gaps = 4/209 (1%)
 Frame = -2

Query: 912 TTPVNTVPPEYDVNNTTIFVGNLDLNVSEEELKQNFLQFGDIVSVKIHAGKGCGFVQFGT 733
           T PVNTVPPEYDVNNTTI+VGNLDLNVSEEELKQNFLQFG+IVSVK+H GK CGFVQFG 
Sbjct: 219 TAPVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGA 278

Query: 732 RASAEEAIQKMQGKMIGQQVIRVSWGRTLTARQDLPGGWGQQMDPSQWS-XXXXXXXXXX 556
           RASAEEAIQKMQGK++GQQVIRVSWGR  TARQD+PGGWGQQ+D SQWS           
Sbjct: 279 RASAEEAIQKMQGKILGQQVIRVSWGRPQTARQDVPGGWGQQVDQSQWSAYYGYGQPGYE 338

Query: 555 XXXXXATHDPSS---XXXXXXXXXXXQVEGAAQDVSSMSVPTMEQKEELYDPMAMPDVDK 385
                A  DPS               QVEG AQDVS+MSVPT+EQ+EELYDP+AMPDVDK
Sbjct: 339 AYAYGAAQDPSMYAYAGYASYAQYPQQVEG-AQDVSAMSVPTLEQREELYDPLAMPDVDK 397

Query: 384 LNAAYLSIHGSAILGRSLWHRTNSSSLQQ 298
           LNAAYLS+HG+AILGRSLWH+T+SSSLQQ
Sbjct: 398 LNAAYLSVHGNAILGRSLWHKTHSSSLQQ 426


>ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Glycine max]
          Length = 419

 Score =  291 bits (745), Expect = 2e-76
 Identities = 155/210 (73%), Positives = 166/210 (79%), Gaps = 4/210 (1%)
 Frame = -2

Query: 912 TTPVNTV-PPEYDVNNTTIFVGNLDLNVSEEELKQNFLQFGDIVSVKIHAGKGCGFVQFG 736
           T+PV  V PP+YDVNNTTIFVGNLDLNVSEEELKQN LQFG+IVSVKI  GKG GFVQFG
Sbjct: 211 TSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFG 270

Query: 735 TRASAEEAIQKMQGKMIGQQVIRVSWGRTLTARQDLPGGWGQQMDPSQWSXXXXXXXXXX 556
           TRASAEEAIQKMQGKMIGQQV+R+SWGRTLTARQDLPGGWG QMDP+QWS          
Sbjct: 271 TRASAEEAIQKMQGKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWSAYYGYGQGYE 330

Query: 555 XXXXXATHDPS---SXXXXXXXXXXXQVEGAAQDVSSMSVPTMEQKEELYDPMAMPDVDK 385
                  HDPS               QVEG AQD+S MSVPTMEQ+EELYDP+AMPDVDK
Sbjct: 331 AYAYGPAHDPSLYAYGAYPGYAQYPQQVEG-AQDLSGMSVPTMEQREELYDPLAMPDVDK 389

Query: 384 LNAAYLSIHGSAILGRSLWHRTNSSSLQQA 295
           LNAAYLS+HGSAILGRSLW +T SSSLQQA
Sbjct: 390 LNAAYLSVHGSAILGRSLWQKTCSSSLQQA 419


>ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Glycine max]
          Length = 404

 Score =  288 bits (738), Expect = 1e-75
 Identities = 153/210 (72%), Positives = 165/210 (78%), Gaps = 4/210 (1%)
 Frame = -2

Query: 912 TTPVNTV-PPEYDVNNTTIFVGNLDLNVSEEELKQNFLQFGDIVSVKIHAGKGCGFVQFG 736
           T PV  V PPEYDVNNT IFVGNLDLNVSEEELKQNFLQFG+IVSVK+ +GKGCGFVQFG
Sbjct: 196 TAPVVQVQPPEYDVNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQSGKGCGFVQFG 255

Query: 735 TRASAEEAIQKMQGKMIGQQVIRVSWGRTLTARQDLPGGWGQQMDPSQWSXXXXXXXXXX 556
           TRASAEEAIQKMQ KMIGQQV+R+SWGRTLTARQDLPGGWG QMDP+QWS          
Sbjct: 256 TRASAEEAIQKMQEKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWSAYYGYGQGYE 315

Query: 555 XXXXXATHDPS---SXXXXXXXXXXXQVEGAAQDVSSMSVPTMEQKEELYDPMAMPDVDK 385
                A HDPS               QVEG AQD+S MSVPTMEQ+EELYDP+AMPDVDK
Sbjct: 316 AYAYGAAHDPSFYAYGAYAGYAQYPQQVEG-AQDLSGMSVPTMEQREELYDPLAMPDVDK 374

Query: 384 LNAAYLSIHGSAILGRSLWHRTNSSSLQQA 295
           LNAAYLS+HGSAILGR  W +T S+SLQQA
Sbjct: 375 LNAAYLSVHGSAILGRLPWQKTCSTSLQQA 404


>ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Glycine max]
          Length = 410

 Score =  264 bits (675), Expect = 2e-68
 Identities = 147/210 (70%), Positives = 158/210 (75%), Gaps = 4/210 (1%)
 Frame = -2

Query: 912 TTPVNTV-PPEYDVNNTTIFVGNLDLNVSEEELKQNFLQFGDIVSVKIHAGKGCGFVQFG 736
           T+PV  V PP+YDVNNTTIFVGNLDLNVSEEELKQN LQFG+IVSVKI  GKG GFVQFG
Sbjct: 211 TSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFG 270

Query: 735 TRASAEEAIQKMQGKMIGQQVIRVSWGRTLTARQDLPGGWGQQMDPSQWSXXXXXXXXXX 556
           TRASAEEAIQKMQGKMIGQQV+R+SWGRTLTAR         QMDP+QWS          
Sbjct: 271 TRASAEEAIQKMQGKMIGQQVVRISWGRTLTAR---------QMDPNQWSAYYGYGQGYE 321

Query: 555 XXXXXATHDPS---SXXXXXXXXXXXQVEGAAQDVSSMSVPTMEQKEELYDPMAMPDVDK 385
                  HDPS               QVEG AQD+S MSVPTMEQ+EELYDP+AMPDVDK
Sbjct: 322 AYAYGPAHDPSLYAYGAYPGYAQYPQQVEG-AQDLSGMSVPTMEQREELYDPLAMPDVDK 380

Query: 384 LNAAYLSIHGSAILGRSLWHRTNSSSLQQA 295
           LNAAYLS+HGSAILGRSLW +T SSSLQQA
Sbjct: 381 LNAAYLSVHGSAILGRSLWQKTCSSSLQQA 410


>ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Glycine max]
          Length = 401

 Score =  261 bits (668), Expect = 1e-67
 Identities = 141/209 (67%), Positives = 160/209 (76%), Gaps = 3/209 (1%)
 Frame = -2

Query: 912 TTPVNTVPPEYDVNNTTIFVGNLDLNVSEEELKQNFLQFGDIVSVKIHAGKGCGFVQFGT 733
           T PV+TV PE DVNNTT+ +GNLDLNV+EEELKQ F+QFGDIV VKI+AGKG G+VQFGT
Sbjct: 199 TAPVSTVAPENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKGYGYVQFGT 258

Query: 732 RASAEEAIQKMQGKMIGQQVIRVSWGRTLTARQDLPGGWGQQMDPSQWSXXXXXXXXXXX 553
           RASAE+AIQ+MQGK+IGQQVI++SWG TLTARQD+PGGWG QMDPSQWS           
Sbjct: 259 RASAEDAIQRMQGKVIGQQVIQISWGSTLTARQDVPGGWGAQMDPSQWSAYYGYGQGYES 318

Query: 552 XXXXATHDPS---SXXXXXXXXXXXQVEGAAQDVSSMSVPTMEQKEELYDPMAMPDVDKL 382
               ATHDPS                VEG AQD+S++S+P     EELYDP+AMPDVDKL
Sbjct: 319 YAYGATHDPSLYAYGAYAGYAQYPQNVEG-AQDMSAVSMP----MEELYDPLAMPDVDKL 373

Query: 381 NAAYLSIHGSAILGRSLWHRTNSSSLQQA 295
           NAAYLSIHGS+ILGRSLW RT S SLQQA
Sbjct: 374 NAAYLSIHGSSILGRSLWQRT-SQSLQQA 401


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