BLASTX nr result

ID: Glycyrrhiza23_contig00007289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007289
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACI03399.1| beta-tubulin [Prunus salicina var. cordata]            493   e-137
gb|ACJ84349.1| unknown [Medicago truncatula]                          492   e-137
sp|P29500.1|TBB1_PEA RecName: Full=Tubulin beta-1 chain; AltName...   492   e-137
sp|Q9ZPN8.1|TBB3_ELEIN RecName: Full=Tubulin beta-3 chain; AltNa...   491   e-137
ref|NP_001169695.1| uncharacterized protein LOC100383576 [Zea ma...   491   e-137

>gb|ACI03399.1| beta-tubulin [Prunus salicina var. cordata]
          Length = 446

 Score =  493 bits (1268), Expect = e-137
 Identities = 239/261 (91%), Positives = 244/261 (93%)
 Frame = -3

Query: 785 ERINVYYNEAGGGRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG 606
           ER+NVYYNEA GGR+VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG
Sbjct: 45  ERVNVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG 104

Query: 605 HYTEGAELIDSVLDVVRKEAENCDCLQGFQLCHXXXXXXXXXXXXXLISKIREEYPDRMM 426
           HYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH             LISKIREEYPDRMM
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164

Query: 425 MTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRILKLTNPSFGD 246
           MTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR LKLT PSFGD
Sbjct: 165 MTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGD 224

Query: 245 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTL 66
           LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR L
Sbjct: 225 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRAL 284

Query: 65  SVPELSQQMWDSKNMMCAADP 3
           +VPEL+QQMWDSKNMMCAADP
Sbjct: 285 TVPELTQQMWDSKNMMCAADP 305


>gb|ACJ84349.1| unknown [Medicago truncatula]
          Length = 422

 Score =  492 bits (1266), Expect = e-137
 Identities = 240/261 (91%), Positives = 246/261 (94%)
 Frame = -3

Query: 785 ERINVYYNEAGGGRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG 606
           ERI+VYYNEA GGRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG
Sbjct: 18  ERIDVYYNEASGGRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG 77

Query: 605 HYTEGAELIDSVLDVVRKEAENCDCLQGFQLCHXXXXXXXXXXXXXLISKIREEYPDRMM 426
           HYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH             LISKIREEYPDRMM
Sbjct: 78  HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 137

Query: 425 MTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRILKLTNPSFGD 246
           +TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE MVLDNEALYDICFRILKL+NPSFGD
Sbjct: 138 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVLDNEALYDICFRILKLSNPSFGD 197

Query: 245 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTL 66
           LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTL
Sbjct: 198 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTL 257

Query: 65  SVPELSQQMWDSKNMMCAADP 3
           SVPEL+QQMWD+KNMMCAADP
Sbjct: 258 SVPELTQQMWDAKNMMCAADP 278


>sp|P29500.1|TBB1_PEA RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|20758|emb|CAA38613.1| beta-tubulin 1 [Pisum sativum]
          Length = 450

 Score =  492 bits (1266), Expect = e-137
 Identities = 240/261 (91%), Positives = 246/261 (94%)
 Frame = -3

Query: 785 ERINVYYNEAGGGRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG 606
           ERI+VYYNEA GGRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG
Sbjct: 45  ERIDVYYNEASGGRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG 104

Query: 605 HYTEGAELIDSVLDVVRKEAENCDCLQGFQLCHXXXXXXXXXXXXXLISKIREEYPDRMM 426
           HYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH             LISKIREEYPDRMM
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164

Query: 425 MTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRILKLTNPSFGD 246
           +TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE MVLDNEALYDICFRILKL+NPSFGD
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVLDNEALYDICFRILKLSNPSFGD 224

Query: 245 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTL 66
           LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTL
Sbjct: 225 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTL 284

Query: 65  SVPELSQQMWDSKNMMCAADP 3
           SVPEL+QQMWD+KNMMCAADP
Sbjct: 285 SVPELTQQMWDAKNMMCAADP 305


>sp|Q9ZPN8.1|TBB3_ELEIN RecName: Full=Tubulin beta-3 chain; AltName: Full=Beta-3-tubulin
           gi|4415994|gb|AAD20180.1| beta-tubulin 3 [Eleusine
           indica]
          Length = 446

 Score =  491 bits (1263), Expect = e-137
 Identities = 237/261 (90%), Positives = 245/261 (93%)
 Frame = -3

Query: 785 ERINVYYNEAGGGRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG 606
           ERINVYYNEAGGGRFVPRAVLMDLEPGTMDS+RSGPYGQIFRPDNFVFGQSGAGNNWAKG
Sbjct: 45  ERINVYYNEAGGGRFVPRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKG 104

Query: 605 HYTEGAELIDSVLDVVRKEAENCDCLQGFQLCHXXXXXXXXXXXXXLISKIREEYPDRMM 426
           HYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH             LISKIREEYPDRMM
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164

Query: 425 MTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRILKLTNPSFGD 246
           +TFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR LKL  P+FGD
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGD 224

Query: 245 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTL 66
           LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR+L
Sbjct: 225 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSL 284

Query: 65  SVPELSQQMWDSKNMMCAADP 3
           +VPEL+QQMWD+KNMMCAADP
Sbjct: 285 TVPELTQQMWDAKNMMCAADP 305


>ref|NP_001169695.1| uncharacterized protein LOC100383576 [Zea mays]
           gi|224030951|gb|ACN34551.1| unknown [Zea mays]
           gi|413935697|gb|AFW70248.1| hypothetical protein
           ZEAMMB73_202058 [Zea mays]
          Length = 444

 Score =  491 bits (1263), Expect = e-137
 Identities = 237/261 (90%), Positives = 244/261 (93%)
 Frame = -3

Query: 785 ERINVYYNEAGGGRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG 606
           ERINVYYNEAGGGRFVPRAVLMDLEPGTMDS+RSGPYGQIFRPDNFVFGQSGAGNNWAKG
Sbjct: 45  ERINVYYNEAGGGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKG 104

Query: 605 HYTEGAELIDSVLDVVRKEAENCDCLQGFQLCHXXXXXXXXXXXXXLISKIREEYPDRMM 426
           HYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH             LISKIREEYPDRMM
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164

Query: 425 MTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRILKLTNPSFGD 246
           +TFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR LKL  P+FGD
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGD 224

Query: 245 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTL 66
           LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR L
Sbjct: 225 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRAL 284

Query: 65  SVPELSQQMWDSKNMMCAADP 3
           +VPEL+QQMWD+KNMMCAADP
Sbjct: 285 TVPELTQQMWDAKNMMCAADP 305


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