BLASTX nr result

ID: Glycyrrhiza23_contig00007266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007266
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein...   223   2e-56
ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein...   215   3e-54
ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein...   212   3e-53
ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like ...   207   5e-52
ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein...   206   2e-51

>ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1656

 Score =  223 bits (567), Expect = 2e-56
 Identities = 114/135 (84%), Positives = 119/135 (88%)
 Frame = +2

Query: 2   KQFLLSLMSGDSKPVNGQVQYHEVIYDLYCNAPQILSGVLPYVTGELQTDQLETRLKAVN 181
           KQFLLSLMSGDSK +N QVQYHEVIYDLYC APQ LSGVLPYVT EL  D+LETRLKAVN
Sbjct: 228 KQFLLSLMSGDSKTMNSQVQYHEVIYDLYCCAPQTLSGVLPYVTEELMADRLETRLKAVN 287

Query: 182 LVGDIIALPKSSIAEAFKPVLSEFLKRLTDSDFGVRMSVLEHVKKSLLSNPHRDEAPQII 361
           LVGDIIALP SS +EAF+P  SEFLKRLTD DFGVRMSVLEHVK SLLSNP R EAPQII
Sbjct: 288 LVGDIIALPGSSTSEAFQPTFSEFLKRLTDRDFGVRMSVLEHVKNSLLSNPSRAEAPQII 347

Query: 362 SSLCDRLLDFDENVR 406
           S+LCDRLLDFDEN R
Sbjct: 348 SALCDRLLDFDENFR 362


>ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1642

 Score =  215 bits (548), Expect = 3e-54
 Identities = 110/135 (81%), Positives = 118/135 (87%)
 Frame = +2

Query: 2   KQFLLSLMSGDSKPVNGQVQYHEVIYDLYCNAPQILSGVLPYVTGELQTDQLETRLKAVN 181
           KQFLLSLMSGDSKPVN QV+YH +IYDLYC APQILSGVLPYVTGEL TDQLE RLKA+N
Sbjct: 225 KQFLLSLMSGDSKPVNSQVEYHGIIYDLYCCAPQILSGVLPYVTGELLTDQLEIRLKAMN 284

Query: 182 LVGDIIALPKSSIAEAFKPVLSEFLKRLTDSDFGVRMSVLEHVKKSLLSNPHRDEAPQII 361
           LVGDII+LP SSI EAF+P+ SEFLKRLTD    VRMSVLEHVK  LL NP R EAPQII
Sbjct: 285 LVGDIISLPGSSIPEAFQPIFSEFLKRLTDRVVDVRMSVLEHVKNCLLLNPFRAEAPQII 344

Query: 362 SSLCDRLLDFDENVR 406
           S+LC+RLLDFDENVR
Sbjct: 345 SALCERLLDFDENVR 359


>ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1648

 Score =  212 bits (539), Expect = 3e-53
 Identities = 110/133 (82%), Positives = 114/133 (85%)
 Frame = +2

Query: 2   KQFLLSLMSGDSKPVNGQVQYHEVIYDLYCNAPQILSGVLPYVTGELQTDQLETRLKAVN 181
           KQFLLSLMSG SK +N QVQYHEVI+DLYC APQ LSGVLPYVT EL  DQLETRLKAVN
Sbjct: 228 KQFLLSLMSGGSKTMNSQVQYHEVIFDLYCCAPQTLSGVLPYVTEELMADQLETRLKAVN 287

Query: 182 LVGDIIALPKSSIAEAFKPVLSEFLKRLTDSDFGVRMSVLEHVKKSLLSNPHRDEAPQII 361
           LVGDIIALP  S AEAF+P  SEFLKRLTD DFGVRMSVLEHVK  LLSNP R EA QII
Sbjct: 288 LVGDIIALPGFSTAEAFQPTFSEFLKRLTDRDFGVRMSVLEHVKSCLLSNPSRAEARQII 347

Query: 362 SSLCDRLLDFDEN 400
           S+LCDRLLDFDEN
Sbjct: 348 SALCDRLLDFDEN 360


>ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
           truncatula] gi|124359430|gb|ABN05881.1| HEAT [Medicago
           truncatula] gi|355483356|gb|AES64559.1| Sister chromatid
           cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 1683

 Score =  207 bits (528), Expect = 5e-52
 Identities = 104/135 (77%), Positives = 118/135 (87%)
 Frame = +2

Query: 2   KQFLLSLMSGDSKPVNGQVQYHEVIYDLYCNAPQILSGVLPYVTGELQTDQLETRLKAVN 181
           K+F LSL+SG SKPVN Q+Q HEV+YD+ C APQILSG+LPYVTGELQTDQLETRLKAVN
Sbjct: 228 KEFFLSLVSGKSKPVNSQLQNHEVLYDICCCAPQILSGILPYVTGELQTDQLETRLKAVN 287

Query: 182 LVGDIIALPKSSIAEAFKPVLSEFLKRLTDSDFGVRMSVLEHVKKSLLSNPHRDEAPQII 361
           LVGDIIALP  S A AF+P+LSEFLK LTD+DFGVR+SVL+HVK SLLSNP R EAPQ+I
Sbjct: 288 LVGDIIALPGISSALAFQPILSEFLKTLTDTDFGVRISVLDHVKSSLLSNPQRPEAPQLI 347

Query: 362 SSLCDRLLDFDENVR 406
           S+LCD L+D DEN R
Sbjct: 348 SALCDGLMDSDENFR 362


>ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1641

 Score =  206 bits (524), Expect = 2e-51
 Identities = 105/135 (77%), Positives = 116/135 (85%)
 Frame = +2

Query: 2   KQFLLSLMSGDSKPVNGQVQYHEVIYDLYCNAPQILSGVLPYVTGELQTDQLETRLKAVN 181
           KQFLLSL+SGDSKPVN QV+YH +IYDLYC APQILS +LPYVTGEL TDQLE RLKA+N
Sbjct: 225 KQFLLSLISGDSKPVNSQVEYHGIIYDLYCCAPQILSRILPYVTGELLTDQLEIRLKAMN 284

Query: 182 LVGDIIALPKSSIAEAFKPVLSEFLKRLTDSDFGVRMSVLEHVKKSLLSNPHRDEAPQII 361
           LVGDII+LP SSI EAF+ + SEFLKRLTD    VRMSVLEHV+  LL NP R EAPQII
Sbjct: 285 LVGDIISLPGSSIPEAFQSIFSEFLKRLTDRVVDVRMSVLEHVRNCLLLNPFRAEAPQII 344

Query: 362 SSLCDRLLDFDENVR 406
           S+LC+RLLDFDENVR
Sbjct: 345 SALCERLLDFDENVR 359


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