BLASTX nr result

ID: Glycyrrhiza23_contig00007263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007263
         (1361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   541   e-151
ref|XP_002322722.1| predicted protein [Populus trichocarpa] gi|2...   538   e-150
dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]                          535   e-150
ref|XP_002534470.1| transcription initiation factor iib, putativ...   533   e-149
ref|XP_002308933.1| predicted protein [Populus trichocarpa] gi|2...   532   e-149

>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
            sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
            transcription initiation factor IIB-2-like [Cucumis
            sativus]
          Length = 312

 Score =  541 bits (1394), Expect = e-151
 Identities = 273/308 (88%), Positives = 277/308 (89%)
 Frame = -3

Query: 1359 FCSDCKRETEVVFDHSAGDTVCSECGLVLDSHSIDEGSEWRIFANESNDNDPVRVGGPTN 1180
            FCSDCKR+TEVVFDHSAGDTVCSECGLVL+SHSIDE SEWR FANES DNDPVRVGGPTN
Sbjct: 5    FCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPTN 64

Query: 1179 PLLTDGGLSTVIAKPNXXXXXXXXXXXGRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT 1000
            PLL DGGLSTVIAKPN           GRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT
Sbjct: 65   PLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT 124

Query: 999  IKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG 820
            IKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG
Sbjct: 125  IKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG 184

Query: 819  RAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXXXEFDIRR 640
            RAKEYIVKQLGLE GQSVEMGTIHAGDFMRRFCSNLGMNN              EFDIRR
Sbjct: 185  RAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRR 244

Query: 639  SPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEE 460
            SPISIAAAVIYIITQLSDDKKPLKDIS+ATGVAEGTIRNSYKDLYPHVSKI+P WYAKEE
Sbjct: 245  SPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKILPGWYAKEE 304

Query: 459  DLKNLCSP 436
            DLKNLCSP
Sbjct: 305  DLKNLCSP 312


>ref|XP_002322722.1| predicted protein [Populus trichocarpa] gi|222867352|gb|EEF04483.1|
            predicted protein [Populus trichocarpa]
          Length = 312

 Score =  538 bits (1385), Expect = e-150
 Identities = 271/308 (87%), Positives = 276/308 (89%)
 Frame = -3

Query: 1359 FCSDCKRETEVVFDHSAGDTVCSECGLVLDSHSIDEGSEWRIFANESNDNDPVRVGGPTN 1180
            FCSDCKR TEVVFDHSAGDTVCSECGLVL+SHSIDE SEWR FANES DNDPVRVGGPTN
Sbjct: 5    FCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPTN 64

Query: 1179 PLLTDGGLSTVIAKPNXXXXXXXXXXXGRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT 1000
            PLLTDGGLSTVIAKPN           GRWQNRGSNPDRGLI AFKTIATMSDRLGLVAT
Sbjct: 65   PLLTDGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLITAFKTIATMSDRLGLVAT 124

Query: 999  IKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG 820
            IKDRANEIYK+VEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG
Sbjct: 125  IKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG 184

Query: 819  RAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXXXEFDIRR 640
            RAKEYIVKQLGLE GQSVEMGTIHAGDFMRRFCSNLGM+N              +FDIRR
Sbjct: 185  RAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQFDIRR 244

Query: 639  SPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEE 460
            SPISIAAAVIYIITQLSDDKKPL+DISLATGVAEGTIRNSYKDLYPHVSKIIPSWYA EE
Sbjct: 245  SPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPSWYASEE 304

Query: 459  DLKNLCSP 436
            DLKNLCSP
Sbjct: 305  DLKNLCSP 312


>dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]
          Length = 312

 Score =  535 bits (1379), Expect = e-150
 Identities = 270/308 (87%), Positives = 276/308 (89%)
 Frame = -3

Query: 1359 FCSDCKRETEVVFDHSAGDTVCSECGLVLDSHSIDEGSEWRIFANESNDNDPVRVGGPTN 1180
            FCSDCKR+TEVVFDHSAGDTVCSECGLVL+SHSIDE SEWR FANES DNDPVRVGGPTN
Sbjct: 5    FCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPTN 64

Query: 1179 PLLTDGGLSTVIAKPNXXXXXXXXXXXGRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT 1000
            PLL DGGLSTVIAKPN           GRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT
Sbjct: 65   PLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT 124

Query: 999  IKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG 820
            IKDRANEIYK+VEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG
Sbjct: 125  IKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG 184

Query: 819  RAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXXXEFDIRR 640
            RAKEYIVKQLGLE GQSVEMGTIHAGDFMRRFCSNLGMNN              EFDIRR
Sbjct: 185  RAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAMKAAQEAVQKSEEFDIRR 244

Query: 639  SPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEE 460
            SPISIAAAVIYII+QLSDDKKPL++IS ATGVAEGTIRNSYKDLYPHVSKIIP WYAKEE
Sbjct: 245  SPISIAAAVIYIISQLSDDKKPLREISQATGVAEGTIRNSYKDLYPHVSKIIPGWYAKEE 304

Query: 459  DLKNLCSP 436
            DLKNLCSP
Sbjct: 305  DLKNLCSP 312


>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
            gi|223525233|gb|EEF27913.1| transcription initiation
            factor iib, putative [Ricinus communis]
          Length = 312

 Score =  533 bits (1373), Expect = e-149
 Identities = 270/308 (87%), Positives = 276/308 (89%)
 Frame = -3

Query: 1359 FCSDCKRETEVVFDHSAGDTVCSECGLVLDSHSIDEGSEWRIFANESNDNDPVRVGGPTN 1180
            +CSDCKR+TEVVFDHSAGDTVCSECGLVL+SHSIDE SEWR FANES DNDPVRVGGPTN
Sbjct: 5    YCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPTN 64

Query: 1179 PLLTDGGLSTVIAKPNXXXXXXXXXXXGRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT 1000
            PLL DGGLSTVIAKPN           GRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT
Sbjct: 65   PLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT 124

Query: 999  IKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG 820
            IKDRANEIYK+VEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG
Sbjct: 125  IKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG 184

Query: 819  RAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXXXEFDIRR 640
            RAKEYIVKQLGLE GQSVEMGTIHAGDFMRRFCSNLGMNN              EFDIRR
Sbjct: 185  RAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAMKAAQEAVQKSEEFDIRR 244

Query: 639  SPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEE 460
            SPISIAAAVIYII+QLSDDKK L+DIS ATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEE
Sbjct: 245  SPISIAAAVIYIISQLSDDKKLLRDISHATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEE 304

Query: 459  DLKNLCSP 436
            DLKNLCSP
Sbjct: 305  DLKNLCSP 312


>ref|XP_002308933.1| predicted protein [Populus trichocarpa] gi|222854909|gb|EEE92456.1|
            predicted protein [Populus trichocarpa]
          Length = 312

 Score =  532 bits (1371), Expect = e-149
 Identities = 269/308 (87%), Positives = 276/308 (89%)
 Frame = -3

Query: 1359 FCSDCKRETEVVFDHSAGDTVCSECGLVLDSHSIDEGSEWRIFANESNDNDPVRVGGPTN 1180
            FCSDCK+ TEVV DHSAGDTVCSECGLVL+SHSIDE SEWRIFANES DNDPVRVGGPTN
Sbjct: 5    FCSDCKKHTEVVCDHSAGDTVCSECGLVLESHSIDETSEWRIFANESGDNDPVRVGGPTN 64

Query: 1179 PLLTDGGLSTVIAKPNXXXXXXXXXXXGRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT 1000
            PLLTDGGLSTVIAKPN           GRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT
Sbjct: 65   PLLTDGGLSTVIAKPNGASGDFLSTSLGRWQNRGSNPDRGLILAFKTIATMSDRLGLVAT 124

Query: 999  IKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG 820
            IKDRANEIYK+VEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG
Sbjct: 125  IKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIG 184

Query: 819  RAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXXXEFDIRR 640
            RAKEYIVKQLGLE GQSVEMGTIHAGDFMRRFCSNLGM+N              +FDIRR
Sbjct: 185  RAKEYIVKQLGLEAGQSVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQFDIRR 244

Query: 639  SPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEE 460
            SPISIAAAVIYIITQLSDDKKPL+DISLATGVAEGTIRNSYKDLYPHVSKIIP+WYA EE
Sbjct: 245  SPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPAWYANEE 304

Query: 459  DLKNLCSP 436
            DLKNL SP
Sbjct: 305  DLKNLSSP 312


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