BLASTX nr result
ID: Glycyrrhiza23_contig00007250
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00007250
(1877 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi... 755 0.0
ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi... 675 0.0
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,... 658 0.0
ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containi... 653 0.0
ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containi... 653 0.0
>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 755 bits (1949), Expect = 0.0
Identities = 379/477 (79%), Positives = 413/477 (86%), Gaps = 3/477 (0%)
Frame = +1
Query: 127 PDSASETEKLVAVTDERRRRIAXXXXXXXXXXXXXXXXXXXXXVASQKAVSVILRREATK 306
P S S + VTDER RRIA VASQKAVSVIL REATK
Sbjct: 42 PPSPSSLSASLVVTDERTRRIARELEKLKARERKEMRNRK---VASQKAVSVILWREATK 98
Query: 307 AIIDKR---RTKKGPINSKKLLPRTVLEALHERVTAQRWESALKVFELMREQLWYRPNPG 477
A+IDK R KKGPINSKKLLPRTVLEALHERVTA RWESALKVFEL+ EQ+WY+P+ G
Sbjct: 99 AMIDKSGGGRKKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLHEQIWYKPDTG 158
Query: 478 VYIKLIVMLGKCRQPEKALELFQAMVDEGCVLDCESYTALLSAYSRSGLLERAFTLLEEM 657
VYIKLIVMLGKC+QPEKA ELFQAMVDEGCVLDCESYTALLSAYSRSGLL++AF+LLEEM
Sbjct: 159 VYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSAYSRSGLLDKAFSLLEEM 218
Query: 658 KSTPGCMPDVQTYSILIKSCMQVFAFDKVQNLLSDMAIHGVKPNTVTYNTLIDAYGKAKR 837
K+TPGC PDVQTYSIL+KSC+QVFAFDK+Q+LLSDM G+KPNTVTYNTLIDAYGKA++
Sbjct: 219 KNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTNRGIKPNTVTYNTLIDAYGKARK 278
Query: 838 FSEMESTLVEMLGDQDCQPDVWTMNSTLRAFGNLGQIETMERCYDKFQTTGIQPNVQTFN 1017
FSEMES LVEML D+ CQPDVWTMNSTLRAFGN+GQIETME+CY+KFQ GIQPNVQTFN
Sbjct: 279 FSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTFN 338
Query: 1018 ILLDSYGKARDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLRQMEYLFRLMQSE 1197
ILLDSYGKA+DYKKMSAVMEYMQKYHYSWTIVT+NIVIDAFGKAGDL+QMEYLFRLM+SE
Sbjct: 339 ILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSE 398
Query: 1198 RIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVENSDVSLDTIFFNCLVDAFGRLGCLDEM 1377
RIKPSCVTLCSLVRAYA AGKPEKI GVLRFVENSDV LDT+FFNCLVDA+ RLGCL EM
Sbjct: 399 RIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVFFNCLVDAYARLGCLAEM 458
Query: 1378 RKVLEIMEQKGCKPDIITYRTMIKAYSFKGMHSQVKELRALLTTVKRPPSKRDKPDF 1548
+ VLE+M+Q GCKPDI+TYRTMIK Y++KGM S KELR LL TV RPP KRDKPDF
Sbjct: 459 KGVLEMMKQNGCKPDIVTYRTMIKTYTYKGMDSHAKELRELLPTVNRPPLKRDKPDF 515
>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product
[Vitis vinifera]
Length = 497
Score = 675 bits (1742), Expect = 0.0
Identities = 330/431 (76%), Positives = 379/431 (87%)
Frame = +1
Query: 256 VASQKAVSVILRREATKAIIDKRRTKKGPINSKKLLPRTVLEALHERVTAQRWESALKVF 435
+AS+KA+SVILRREATKA+I+K+R GP NSKKLLPRTVLEALHER+TA RWESALKVF
Sbjct: 69 IASKKAISVILRREATKAVIEKKR---GPNNSKKLLPRTVLEALHERITALRWESALKVF 125
Query: 436 ELMREQLWYRPNPGVYIKLIVMLGKCRQPEKALELFQAMVDEGCVLDCESYTALLSAYSR 615
EL+REQLWYRPN G+YIKLIVMLGKC+QPEKA LF AM+DEGCV++ E+YTALLSAYSR
Sbjct: 126 ELLREQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSR 185
Query: 616 SGLLERAFTLLEEMKSTPGCMPDVQTYSILIKSCMQVFAFDKVQNLLSDMAIHGVKPNTV 795
SGL ++AF+LLE+MK+TP C PDV TYS+LIKSC+QV AFDKV LLSDMA G+KPNTV
Sbjct: 186 SGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTV 245
Query: 796 TYNTLIDAYGKAKRFSEMESTLVEMLGDQDCQPDVWTMNSTLRAFGNLGQIETMERCYDK 975
TYNTLIDAYGKAKRF+EMESTL+EML + C+PDVWTMNSTLRAFG+ GQIETME+CY+K
Sbjct: 246 TYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEK 305
Query: 976 FQTTGIQPNVQTFNILLDSYGKARDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 1155
FQ+ GI+PN++TFNILLDSYGKA Y+KMSAVMEYMQKYH+SWTIVTYN+VIDAFG+AGD
Sbjct: 306 FQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGD 365
Query: 1156 LRQMEYLFRLMQSERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVENSDVSLDTIFFNC 1335
L+QMEYLFRLM+SERIKPSCVTLCSLVRAY AGK EKIGGVLRF+ENSDV LD +FFNC
Sbjct: 366 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNC 425
Query: 1336 LVDAFGRLGCLDEMRKVLEIMEQKGCKPDIITYRTMIKAYSFKGMHSQVKELRALLTTVK 1515
LVDA+GRLGC EM+ VLE+M++KGCKPD ITYRTMIKAY GM S KEL+ L+
Sbjct: 426 LVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGLMRMPD 485
Query: 1516 RPPSKRDKPDF 1548
+ KPDF
Sbjct: 486 ETRLEMGKPDF 496
>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 636
Score = 658 bits (1697), Expect = 0.0
Identities = 322/415 (77%), Positives = 366/415 (88%)
Frame = +1
Query: 256 VASQKAVSVILRREATKAIIDKRRTKKGPINSKKLLPRTVLEALHERVTAQRWESALKVF 435
+AS+KA+SVILRREATKAII+K+R GP NSKKLLPRTVLEALHER+TA RWESALKVF
Sbjct: 86 IASRKAISVILRREATKAIIEKKR---GPTNSKKLLPRTVLEALHERITALRWESALKVF 142
Query: 436 ELMREQLWYRPNPGVYIKLIVMLGKCRQPEKALELFQAMVDEGCVLDCESYTALLSAYSR 615
EL+REQ+WYRP G+YIKLIVMLGKC+QPEKA ELFQAM+ EGC + ESYTALLSAY R
Sbjct: 143 ELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGR 202
Query: 616 SGLLERAFTLLEEMKSTPGCMPDVQTYSILIKSCMQVFAFDKVQNLLSDMAIHGVKPNTV 795
SGLL++AF+LLEEMK P C PDV TYSILIKSC+QVFAFDK + LLS+M G+ PNT+
Sbjct: 203 SGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTI 262
Query: 796 TYNTLIDAYGKAKRFSEMESTLVEMLGDQDCQPDVWTMNSTLRAFGNLGQIETMERCYDK 975
TYNTLIDAYGKAK F EME+TLV+ML Q+C+PDVWTMNSTLRAFG GQIETME+CY+K
Sbjct: 263 TYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEK 322
Query: 976 FQTTGIQPNVQTFNILLDSYGKARDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 1155
FQ GI+P++ TFN+LLDSYGKA DYKKMSAVMEYMQKYHYSWTI+TYNIVIDAFG+AGD
Sbjct: 323 FQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGD 382
Query: 1156 LRQMEYLFRLMQSERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVENSDVSLDTIFFNC 1335
L+QMEYLFRLM+SERIKPSCVTLCSLVRAY A KPEKI GVLRF+ENSD++LDT+FFNC
Sbjct: 383 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNC 442
Query: 1336 LVDAFGRLGCLDEMRKVLEIMEQKGCKPDIITYRTMIKAYSFKGMHSQVKELRAL 1500
LVDA+GR+GC EM+ VL +MEQKG +PD ITYRTMIKAYS KGM VKEL+ L
Sbjct: 443 LVDAYGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQDL 497
>ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 511
Score = 653 bits (1684), Expect = 0.0
Identities = 318/430 (73%), Positives = 369/430 (85%)
Frame = +1
Query: 256 VASQKAVSVILRREATKAIIDKRRTKKGPINSKKLLPRTVLEALHERVTAQRWESALKVF 435
+ASQKA+SVILRREATKA+I+++R GP NSKKLLPRTVLEALH+R+T RWESALKVF
Sbjct: 86 IASQKAISVILRREATKAVIERKR---GPNNSKKLLPRTVLEALHDRITTLRWESALKVF 142
Query: 436 ELMREQLWYRPNPGVYIKLIVMLGKCRQPEKALELFQAMVDEGCVLDCESYTALLSAYSR 615
EL+REQLWYRP G+YIKLIVMLGKC+Q EKA ELFQ M++EGC + ESYTALLSAYSR
Sbjct: 143 ELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSR 202
Query: 616 SGLLERAFTLLEEMKSTPGCMPDVQTYSILIKSCMQVFAFDKVQNLLSDMAIHGVKPNTV 795
SGLL+ AF++L EMK++P C PDV TYSILIKSC+QVFAF+K Q LLSDM G+KPNT+
Sbjct: 203 SGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTI 262
Query: 796 TYNTLIDAYGKAKRFSEMESTLVEMLGDQDCQPDVWTMNSTLRAFGNLGQIETMERCYDK 975
TYNT IDAYGKAK F+EMES LV+ML D C+PDVWTMNSTLRAFG GQ+ETME+CY+K
Sbjct: 263 TYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEK 322
Query: 976 FQTTGIQPNVQTFNILLDSYGKARDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 1155
FQ GIQP++QTFNILLDSYGKA Y+KMSAVMEYMQKYHYSWTIVTYNIVIDAFG+AG+
Sbjct: 323 FQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGN 382
Query: 1156 LRQMEYLFRLMQSERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVENSDVSLDTIFFNC 1335
L+QME+LFRLM+SERIKPSCVTLCSLVRAY AGK EKI VL VENSD+ LDT+F+NC
Sbjct: 383 LKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNC 442
Query: 1336 LVDAFGRLGCLDEMRKVLEIMEQKGCKPDIITYRTMIKAYSFKGMHSQVKELRALLTTVK 1515
LVDA+GRL C EM+KVL +MEQ+GCKPD TYRTM +AYS GM + KE++ L+TT +
Sbjct: 443 LVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAE 502
Query: 1516 RPPSKRDKPD 1545
PSKR +PD
Sbjct: 503 --PSKRTRPD 510
>ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 456
Score = 653 bits (1684), Expect = 0.0
Identities = 318/430 (73%), Positives = 369/430 (85%)
Frame = +1
Query: 256 VASQKAVSVILRREATKAIIDKRRTKKGPINSKKLLPRTVLEALHERVTAQRWESALKVF 435
+ASQKA+SVILRREATKA+I+++R GP NSKKLLPRTVLEALH+R+T RWESALKVF
Sbjct: 31 IASQKAISVILRREATKAVIERKR---GPNNSKKLLPRTVLEALHDRITTLRWESALKVF 87
Query: 436 ELMREQLWYRPNPGVYIKLIVMLGKCRQPEKALELFQAMVDEGCVLDCESYTALLSAYSR 615
EL+REQLWYRP G+YIKLIVMLGKC+Q EKA ELFQ M++EGC + ESYTALLSAYSR
Sbjct: 88 ELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSR 147
Query: 616 SGLLERAFTLLEEMKSTPGCMPDVQTYSILIKSCMQVFAFDKVQNLLSDMAIHGVKPNTV 795
SGLL+ AF++L EMK++P C PDV TYSILIKSC+QVFAF+K Q LLSDM G+KPNT+
Sbjct: 148 SGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTI 207
Query: 796 TYNTLIDAYGKAKRFSEMESTLVEMLGDQDCQPDVWTMNSTLRAFGNLGQIETMERCYDK 975
TYNT IDAYGKAK F+EMES LV+ML D C+PDVWTMNSTLRAFG GQ+ETME+CY+K
Sbjct: 208 TYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEK 267
Query: 976 FQTTGIQPNVQTFNILLDSYGKARDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 1155
FQ GIQP++QTFNILLDSYGKA Y+KMSAVMEYMQKYHYSWTIVTYNIVIDAFG+AG+
Sbjct: 268 FQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGN 327
Query: 1156 LRQMEYLFRLMQSERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVENSDVSLDTIFFNC 1335
L+QME+LFRLM+SERIKPSCVTLCSLVRAY AGK EKI VL VENSD+ LDT+F+NC
Sbjct: 328 LKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNC 387
Query: 1336 LVDAFGRLGCLDEMRKVLEIMEQKGCKPDIITYRTMIKAYSFKGMHSQVKELRALLTTVK 1515
LVDA+GRL C EM+KVL +MEQ+GCKPD TYRTM +AYS GM + KE++ L+TT +
Sbjct: 388 LVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAE 447
Query: 1516 RPPSKRDKPD 1545
PSKR +PD
Sbjct: 448 --PSKRTRPD 455