BLASTX nr result

ID: Glycyrrhiza23_contig00007214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007214
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32330.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_003625831.1| SnRNP core Sm protein Sm-X5-like protein [Me...   187   6e-46
ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containin...   186   2e-45
ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus ...   185   4e-45
ref|XP_002304049.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45

>emb|CBI32330.3| unnamed protein product [Vitis vinifera]
          Length = 137

 Score =  194 bits (492), Expect = 8e-48
 Identities = 102/119 (85%), Positives = 105/119 (88%), Gaps = 1/119 (0%)
 Frame = -2

Query: 437 GSGCKWR-RSRRVSNFVLFVFLRSVKMLFFSYFKDLVGREVTVELKNDLAFRGTLHSVDQ 261
           GSG + R R++R S F    FL    MLFFSYFKDLVGREVTVELKNDLA RGTLHSVDQ
Sbjct: 21  GSGLRSRPRNQRSSRFSPLSFL--FNMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQ 78

Query: 260 YLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 84
           YLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG
Sbjct: 79  YLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 137


>ref|XP_003625831.1| SnRNP core Sm protein Sm-X5-like protein [Medicago truncatula]
           gi|355500846|gb|AES82049.1| SnRNP core Sm protein
           Sm-X5-like protein [Medicago truncatula]
           gi|388519597|gb|AFK47860.1| unknown [Lotus japonicus]
          Length = 93

 Score =  187 bits (476), Expect = 6e-46
 Identities = 92/93 (98%), Positives = 92/93 (98%)
 Frame = -2

Query: 362 MLFFSYFKDLVGREVTVELKNDLAFRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 183
           MLFFSYFKDLVGREVTVELKNDLA RGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1   MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60

Query: 182 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 84
           FIRGSVVRYVQLPPEGVDIELLHDATRREARGG
Sbjct: 61  FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 93


>ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Vitis
           vinifera]
          Length = 489

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/94 (96%), Positives = 92/94 (97%)
 Frame = -2

Query: 365 KMLFFSYFKDLVGREVTVELKNDLAFRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 186
           + LFFSYFKDLVGREVTVELKNDLA RGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN
Sbjct: 396 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 455

Query: 185 CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 84
           CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG
Sbjct: 456 CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 489


>ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus communis]
           gi|223535995|gb|EEF37654.1| Speckle-type POZ protein,
           putative [Ricinus communis]
          Length = 500

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/94 (95%), Positives = 92/94 (97%)
 Frame = -2

Query: 365 KMLFFSYFKDLVGREVTVELKNDLAFRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 186
           + LFFSYFKDLVGREVTVELKNDLA RGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN
Sbjct: 407 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 466

Query: 185 CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 84
           CFIRGSVVRYVQLPPEGVDI+LLHDATRREARGG
Sbjct: 467 CFIRGSVVRYVQLPPEGVDIDLLHDATRREARGG 500


>ref|XP_002304049.1| predicted protein [Populus trichocarpa]
           gi|224118384|ref|XP_002331469.1| predicted protein
           [Populus trichocarpa] gi|118484877|gb|ABK94305.1|
           unknown [Populus trichocarpa]
           gi|222841481|gb|EEE79028.1| predicted protein [Populus
           trichocarpa] gi|222873547|gb|EEF10678.1| predicted
           protein [Populus trichocarpa]
          Length = 93

 Score =  185 bits (469), Expect = 4e-45
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = -2

Query: 362 MLFFSYFKDLVGREVTVELKNDLAFRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 183
           MLFFSYFKDLVG+EVTVELKNDLA RGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1   MLFFSYFKDLVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60

Query: 182 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 84
           FIRGSVVRYVQLPPEGVD++LLHDATRREARGG
Sbjct: 61  FIRGSVVRYVQLPPEGVDVDLLHDATRREARGG 93


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