BLASTX nr result

ID: Glycyrrhiza23_contig00007160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007160
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncat...   213   1e-53
ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...   186   1e-45
ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   182   3e-44
ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [...   153   1e-35
ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [...   148   4e-34

>ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncatula]
           gi|355521585|gb|AET02039.1| ATP-dependent helicase BRM
           [Medicago truncatula]
          Length = 2175

 Score =  213 bits (542), Expect = 1e-53
 Identities = 104/144 (72%), Positives = 119/144 (82%)
 Frame = -2

Query: 433 NIVAEQPRNIESNAKELKSIPAINEHSSIKQESFARDEKYTPPPIHTQAVMPXXXXXXXX 254
           +I AEQPR++E+NAKE KSIPA+N HSS+KQESF+R+EK  PPP+H QAVMP        
Sbjct: 521 HIAAEQPRHVEANAKESKSIPAVNGHSSVKQESFSREEKSAPPPVHIQAVMPSMSKESAS 580

Query: 253 XXSAGKEEQKSVGCSYKTNQDSERGSNSTPVRNEIALDRGKAIAAQASVSDTMQITKPAQ 74
             SAGKEEQK++G S+K  QDSE G+NSTPVRNE ALDRGKAIA QASVSDTMQITKPAQ
Sbjct: 581 TSSAGKEEQKTIGSSFKPKQDSEHGNNSTPVRNESALDRGKAIAPQASVSDTMQITKPAQ 640

Query: 73  TSTISQPKDVGSTRKYHGPLFDFP 2
            +T+SQPKDVG  RKYHGPLFDFP
Sbjct: 641 ATTVSQPKDVGPARKYHGPLFDFP 664


>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score =  186 bits (473), Expect = 1e-45
 Identities = 99/144 (68%), Positives = 111/144 (77%)
 Frame = -2

Query: 433 NIVAEQPRNIESNAKELKSIPAINEHSSIKQESFARDEKYTPPPIHTQAVMPXXXXXXXX 254
           NIVAE    IES+AKE  SIP+IN  SS+KQESF RDEK   P +H QAV P        
Sbjct: 537 NIVAELISPIESSAKEPLSIPSINGQSSLKQESFVRDEKSIVPAVHVQAVAPPVSKESAP 596

Query: 253 XXSAGKEEQKSVGCSYKTNQDSERGSNSTPVRNEIALDRGKAIAAQASVSDTMQITKPAQ 74
             SAGKEEQKS+GCS K+NQD ER +N+T VRNE+ALDRGKA+A QA VSDTMQI KPAQ
Sbjct: 597 TLSAGKEEQKSIGCSVKSNQDGERVNNNT-VRNELALDRGKAVAPQAHVSDTMQIKKPAQ 655

Query: 73  TSTISQPKDVGSTRKYHGPLFDFP 2
           TS++ QPKDVGSTRKYHGPLFDFP
Sbjct: 656 TSSVPQPKDVGSTRKYHGPLFDFP 679


>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  182 bits (461), Expect = 3e-44
 Identities = 97/144 (67%), Positives = 110/144 (76%)
 Frame = -2

Query: 433 NIVAEQPRNIESNAKELKSIPAINEHSSIKQESFARDEKYTPPPIHTQAVMPXXXXXXXX 254
           NI AEQ   IES+AKE +SIP+IN  SS+K ESFARDEK   PP+H QAV P        
Sbjct: 539 NIAAEQISPIESSAKEPQSIPSINGQSSLKHESFARDEKSIVPPVHVQAVAPPVSKESAP 598

Query: 253 XXSAGKEEQKSVGCSYKTNQDSERGSNSTPVRNEIALDRGKAIAAQASVSDTMQITKPAQ 74
             SAGK++QKS+GCS K+NQD E  +N+T VRNE+ALDRGKAIA QA VSDTMQI KP+Q
Sbjct: 599 TLSAGKKDQKSIGCSVKSNQDGECVNNTT-VRNELALDRGKAIAPQAPVSDTMQIKKPSQ 657

Query: 73  TSTISQPKDVGSTRKYHGPLFDFP 2
           TST  QPKDVG TRKYHGPLFDFP
Sbjct: 658 TSTGPQPKDVGPTRKYHGPLFDFP 681


>ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  153 bits (387), Expect = 1e-35
 Identities = 84/145 (57%), Positives = 99/145 (68%), Gaps = 1/145 (0%)
 Frame = -2

Query: 433 NIVAEQPRNIESNAKELKSIPAINEHSSIKQESFARDEKYTPPPIHTQAVMPXXXXXXXX 254
           NIVAE PR  E NAK+ + I +IN  +S KQE F RDE  T   +  Q            
Sbjct: 537 NIVAEHPRQNEVNAKDSQPISSINGKNSSKQEVFVRDENSTVTAVQVQGT------PRVT 590

Query: 253 XXSAGKEEQKSVGCSYKTNQDSERGSNSTPVRNEIALDRGKAIAA-QASVSDTMQITKPA 77
             SAGKEEQ+SV CS K++Q+SE G   TPVRNE+ LD+GKA+AA QASV+D MQ+ KPA
Sbjct: 591 KESAGKEEQQSVACSAKSDQESEHGIGRTPVRNELVLDKGKAVAAPQASVNDAMQLNKPA 650

Query: 76  QTSTISQPKDVGSTRKYHGPLFDFP 2
           Q S +SQ KDVGSTRKYHGPLFDFP
Sbjct: 651 QASAVSQTKDVGSTRKYHGPLFDFP 675


>ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  148 bits (374), Expect = 4e-34
 Identities = 83/145 (57%), Positives = 98/145 (67%), Gaps = 1/145 (0%)
 Frame = -2

Query: 433 NIVAEQPRNIESNAKELKSIPAINEHSSIKQESFARDEKYTPPPIHTQAVMPXXXXXXXX 254
           NIVAEQPR  E NAKE + I +IN   S KQE F RDE      +H Q   P        
Sbjct: 536 NIVAEQPRQNEVNAKESQPISSINGKISSKQEVFVRDENSPVTAVHLQPTPPVTKES--- 592

Query: 253 XXSAGKEEQKSVGCSYKTNQDSERGSNSTPVRNEIALDRGKAIAA-QASVSDTMQITKPA 77
              AG+EEQ+SV C+ K++Q+SE G      RNE+ LD+GKA+AA QASV+D MQ+ KPA
Sbjct: 593 ---AGQEEQQSVACAPKSDQESEHGIG----RNELVLDKGKAVAAPQASVTDAMQLNKPA 645

Query: 76  QTSTISQPKDVGSTRKYHGPLFDFP 2
           Q ST+SQPKDVGSTRKYHGPLFDFP
Sbjct: 646 QASTVSQPKDVGSTRKYHGPLFDFP 670


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