BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007146
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   126   1e-31
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...   125   2e-29
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    86   4e-17
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    84   4e-17
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          78   1e-16

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score =  126 bits (316), Expect(2) = 1e-31
 Identities = 60/122 (49%), Positives = 85/122 (69%)
 Frame = +2

Query: 2    LSLAISEAVQTSKWHPIKVAKDGPYFSHFFSADDVFLFSKATCSQTRFIVDLFARFSVFS 181
            LS+AI +AV    W PI +  DGP  SH   ADDV LF+KA  SQ +FI +LF RFS  S
Sbjct: 653  LSVAIQDAVLQGSWEPIHIINDGPQISHLLFADDVLLFTKAKSSQLQFITNLFDRFSRAS 712

Query: 182  RLRINVAKSRSFFSKGVSCRKIEKIYSISSIRNITSLGKYLGFPLFKGKVKKEDFGFIID 361
             L+IN++KSR+++S G    KI  + +IS I++ T+LGKYLGFP+ +G+ K+ DF FI++
Sbjct: 713  GLKINISKSRAYYSSGTPNGKINNLTAISGIQSTTTLGKYLGFPMLQGRPKRSDFNFILE 772

Query: 362  EV 367
            ++
Sbjct: 773  KM 774



 Score = 35.4 bits (80), Expect(2) = 1e-31
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +1

Query: 367 VQAQLAYWKNKLLNKAGRITLLNRCLACLLPPWKLSWVWV 486
           +Q +LA WKN+LLN+ GR+TL    L+  +P + +   W+
Sbjct: 774 MQTRLASWKNRLLNRTGRLTLATSVLS-TIPTYYMQINWL 812


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score =  125 bits (315), Expect(2) = 2e-29
 Identities = 67/122 (54%), Positives = 88/122 (72%)
 Frame = +2

Query: 2   LSLAISEAVQTSKWHPIKVAKDGPYFSHFFSADDVFLFSKATCSQTRFIVDLFARFSVFS 181
           LSLAI++AV   +W PI+++   P  SH   ADDV LF+KA  SQ RFI DLF RFS   
Sbjct: 213 LSLAINKAVHEGEWEPIRMSASSPPLSHLLFADDVLLFTKAKNSQLRFIKDLFDRFSKAL 272

Query: 182 RLRINVAKSRSFFSKGVSCRKIEKIYSISSIRNITSLGKYLGFPLFKGKVKKEDFGFIID 361
            L+IN++KSR+F+S GV  +KI  + SIS IR+ TSLGKYLGFP+ KG+ K+ DF FII+
Sbjct: 273 GLKINLSKSRAFYS-GVPHQKIINLTSISGIRSTTSLGKYLGFPILKGRPKRSDFLFIIE 331

Query: 362 EV 367
           ++
Sbjct: 332 KM 333



 Score = 28.9 bits (63), Expect(2) = 2e-29
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 376 QLAYWKNKLLNKAG 417
           +LA WKNKLLNKAG
Sbjct: 336 RLATWKNKLLNKAG 349


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 85.9 bits (211), Expect(2) = 4e-17
 Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
 Frame = +2

Query: 14  ISEAVQTSKWHPIKVAKDGPYFSHFFSADDVFLFSKATCSQTRFIVDLFARFSVFSRLRI 193
           I  AV   +W  I +++ GP  SH   ADD+ LF++A+ SQ R I  +   F + S  ++
Sbjct: 332 IDRAVAVKEWKSIGLSQGGPKISHICFADDLILFAEASVSQIRVIRRILETFCIASGQKV 391

Query: 194 NVAKSRSFFSKGVSCRKIEKIYSISS-IRNITSLGKYLGFPLFKGKVKKEDFGFIIDEV 367
           ++ KS+ FFSK VS R +EK+ S  S I++   LGKYLG P+ + ++ K+ FG +++ V
Sbjct: 392 SLDKSKIFFSKNVS-RDLEKLISKESGIKSTRELGKYLGMPILQRRINKDTFGEVLERV 449



 Score = 27.3 bits (59), Expect(2) = 4e-17
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +1

Query: 367 VQAQLAYWKNKLLNKAGRITLLNRCLACLLPPWKLSWV 480
           V ++LA WK + L+ AGR+TL    L+ L+P   +S +
Sbjct: 449 VSSRLAGWKGRSLSFAGRLTLTKSVLS-LIPIHTMSTI 485


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 84.3 bits (207), Expect(2) = 4e-17
 Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
 Frame = +2

Query: 14  ISEAVQTSKWHPIKVAKDGPYFSHFFSADDVFLFSKATCSQTRFIVDLFARFSVFSRLRI 193
           I  AV T +W PI +++ GP  SH   ADD+ LF++A+ +Q R +  +  +F + S  ++
Sbjct: 110 IDLAVGTKEWKPISMSRGGPLLSHICFADDLILFAEASVAQIRVVRKVLEKFCIASGQKV 169

Query: 194 NVAKSRSFFSKGVSCRKIEKIYSISS-IRNITSLGKYLGFPLFKGKVKKEDFGFII 358
           ++ KS+ FFS+ V  R +EK  S  S I++   LGKYLG P+ + ++ K+ FG I+
Sbjct: 170 SLEKSKIFFSQNVH-RDLEKFISDESGIKSTKELGKYLGMPVLQKRINKDTFGEIL 224



 Score = 28.9 bits (63), Expect(2) = 4e-17
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +1

Query: 367 VQAQLAYWKNKLLNKAGRITLLNRCLACL 453
           V ++LA WK ++L+ AGR+TL    L+ +
Sbjct: 227 VSSRLAGWKGRMLSLAGRLTLTKSVLSSI 255


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 78.2 bits (191), Expect(2) = 1e-16
 Identities = 42/117 (35%), Positives = 63/117 (53%)
 Frame = +2

Query: 17   SEAVQTSKWHPIKVAKDGPYFSHFFSADDVFLFSKATCSQTRFIVDLFARFSVFSRLRIN 196
            S  V    W P+ +++ GP  SH   ADD+ LF KAT  Q + ++ +   F     ++IN
Sbjct: 989  SHQVDLGLWEPVAISRGGPRISHLMFADDLLLFCKATKRQVQNVMLVLETFCKAYGMKIN 1048

Query: 197  VAKSRSFFSKGVSCRKIEKIYSISSIRNITSLGKYLGFPLFKGKVKKEDFGFIIDEV 367
            V KS++  SK VS  + E    ISSI  +  LGKYLG  L   +V +  F  ++D++
Sbjct: 1049 VEKSKALCSKNVSATRKEVFTGISSIIFVQDLGKYLGVTLSHSRVTRLAFNGVLDKI 1105



 Score = 33.1 bits (74), Expect(2) = 1e-16
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +1

Query: 367  VQAQLAYWKNKLLNKAGRITLLNRCLACL 453
            ++++LA WK  LLN+AGR+ L+N  +A +
Sbjct: 1105 IRSRLASWKGSLLNRAGRLCLVNFVVAAI 1133