BLASTX nr result

ID: Glycyrrhiza23_contig00007093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00007093
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35237.1| unknown [Lotus japonicus]                              232   1e-58
gb|AFK42205.1| unknown [Medicago truncatula]                          228   1e-57
ref|XP_003592508.1| Endo-1 4-beta-xylanase [Medicago truncatula]...   228   1e-57
ref|XP_003517597.1| PREDICTED: uncharacterized protein LOC100819...   188   1e-45
ref|XP_003538108.1| PREDICTED: uncharacterized protein LOC100781...   178   2e-42

>gb|AFK35237.1| unknown [Lotus japonicus]
          Length = 330

 Score =  232 bits (591), Expect = 1e-58
 Identities = 131/247 (53%), Positives = 157/247 (63%), Gaps = 7/247 (2%)
 Frame = -2

Query: 722 PLPHHSTPQAVDLHNDTDNKPVDHYDHEAPKHAPDPT------QRDEQGSAGQDGRSSGQ 561
           P P HS  ++V      D K  DH   E PKH+  P       Q  E+G+  Q GRS+G+
Sbjct: 78  PPPPHSKQESVGAG---DKKSNDH--QEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGR 132

Query: 560 RKAGERGWWKDIKNQHNXXXXXXXXXRDEKSQAKPEDDTSRRRSGFSERKVYSPPASRKR 381
           R+AG + + +  +N            RDEKSQAK  DD   RR G  ERK   P  +RKR
Sbjct: 133 REAGGKAFAQSKENSERVETSQSREQRDEKSQAKL-DDNLHRRDGSPERKDDPPSNTRKR 191

Query: 380 PVFREKKIPVDSGDANPA-ATVTIMSSQIDHPPEKNERKEERSSNPYHLGRPEKQFADDR 204
           P FREKKI  DSGDANPA +T  + +S  DHPPE+NERKEERS NP HL R EKQ A DR
Sbjct: 192 PAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDR 251

Query: 203 APNKDEARRDGFPSRERYRGNANGGNDNYRGRDKLIGRQGFRPIKTQTEKWKHDLYQEVN 24
           APN+ E RRDGF SR RY G  +GGN+N RGRDK   RQG+ PIKT+TEKWKHDL+QE +
Sbjct: 252 APNRSEGRRDGFSSRARYGG--SGGNNNDRGRDKFNARQGYHPIKTRTEKWKHDLFQEAD 309

Query: 23  KDPIPQN 3
            DP+P+N
Sbjct: 310 NDPVPKN 316


>gb|AFK42205.1| unknown [Medicago truncatula]
          Length = 261

 Score =  228 bits (582), Expect = 1e-57
 Identities = 128/234 (54%), Positives = 150/234 (64%), Gaps = 1/234 (0%)
 Frame = -2

Query: 701 PQAVDLHNDTDNKPVDHYDHEAP-KHAPDPTQRDEQGSAGQDGRSSGQRKAGERGWWKDI 525
           P       D + + +    H  P KH+  P +     S  Q GRS+GQR+A E+ + +  
Sbjct: 20  PSPKKYRRDRERERLTTNGHSEPSKHSSQPPR---SRSYYQVGRSTGQREADEKVYAQSK 76

Query: 524 KNQHNXXXXXXXXXRDEKSQAKPEDDTSRRRSGFSERKVYSPPASRKRPVFREKKIPVDS 345
           +N            RDEKS AK  D   +RR  F ERK    P+ RKRP FREKKIPVDS
Sbjct: 77  ENNQRLETGQSREQRDEKSLAKL-DGNFQRRDSFRERKDDPTPSVRKRPAFREKKIPVDS 135

Query: 344 GDANPAATVTIMSSQIDHPPEKNERKEERSSNPYHLGRPEKQFADDRAPNKDEARRDGFP 165
            +ANPAATVT+ SS   HPPE+NERKEERSSNP HL RPEK+ A+DR  NK E R+DGF 
Sbjct: 136 REANPAATVTVKSSHTSHPPERNERKEERSSNPNHLDRPEKRIAEDRESNKREPRKDGFS 195

Query: 164 SRERYRGNANGGNDNYRGRDKLIGRQGFRPIKTQTEKWKHDLYQEVNKDPIPQN 3
           SR RY G  +GGN N+RGRDK  GRQ   PIKTQTEKWKHDLYQEVNKD IP+N
Sbjct: 196 SRVRYGG--SGGNSNHRGRDKFNGRQDNHPIKTQTEKWKHDLYQEVNKDSIPKN 247


>ref|XP_003592508.1| Endo-1 4-beta-xylanase [Medicago truncatula]
           gi|355481556|gb|AES62759.1| Endo-1 4-beta-xylanase
           [Medicago truncatula]
          Length = 671

 Score =  228 bits (582), Expect = 1e-57
 Identities = 128/234 (54%), Positives = 150/234 (64%), Gaps = 1/234 (0%)
 Frame = -2

Query: 701 PQAVDLHNDTDNKPVDHYDHEAP-KHAPDPTQRDEQGSAGQDGRSSGQRKAGERGWWKDI 525
           P       D + + +    H  P KH+  P +     S  Q GRS+GQR+A E+ + +  
Sbjct: 20  PSPKKYRRDRERERLTTNGHSEPSKHSSQPPR---SRSYYQVGRSTGQREADEKVYAQSK 76

Query: 524 KNQHNXXXXXXXXXRDEKSQAKPEDDTSRRRSGFSERKVYSPPASRKRPVFREKKIPVDS 345
           +N            RDEKS AK  D   +RR  F ERK    P+ RKRP FREKKIPVDS
Sbjct: 77  ENNQRLETGQSREQRDEKSLAKL-DGNFQRRDSFRERKDDPTPSVRKRPAFREKKIPVDS 135

Query: 344 GDANPAATVTIMSSQIDHPPEKNERKEERSSNPYHLGRPEKQFADDRAPNKDEARRDGFP 165
            +ANPAATVT+ SS   HPPE+NERKEERSSNP HL RPEK+ A+DR  NK E R+DGF 
Sbjct: 136 REANPAATVTVKSSHTSHPPERNERKEERSSNPNHLDRPEKRIAEDRESNKREPRKDGFS 195

Query: 164 SRERYRGNANGGNDNYRGRDKLIGRQGFRPIKTQTEKWKHDLYQEVNKDPIPQN 3
           SR RY G  +GGN N+RGRDK  GRQ   PIKTQTEKWKHDLYQEVNKD IP+N
Sbjct: 196 SRVRYGG--SGGNSNHRGRDKFNGRQDNHPIKTQTEKWKHDLYQEVNKDSIPKN 247


>ref|XP_003517597.1| PREDICTED: uncharacterized protein LOC100819584 [Glycine max]
          Length = 249

 Score =  188 bits (478), Expect = 1e-45
 Identities = 123/265 (46%), Positives = 144/265 (54%), Gaps = 4/265 (1%)
 Frame = -2

Query: 785 ENGDHRRHRQLPDAVPLSHEAPLPHHSTPQAVDLHNDTDNKP--VDHYDHEAPKHAPDPT 612
           E G   R R +     + +EAP   H+ P      ND    P  + ++ H          
Sbjct: 29  EYGKEERERVM-SRTNVQNEAPFSKHNKP------NDPIQLPSSLSYFQH---------- 71

Query: 611 QRDEQGSAGQDGRSSGQRKAGERGWWKDIKNQHNXXXXXXXXXR--DEKSQAKPEDDTSR 438
             DE+   GQ G SS  RKA ERGWWKD K Q N            +EKSQAK +D+T +
Sbjct: 72  --DERDGTGQVGLSSVSRKASERGWWKDTKKQLNEMEQTSHGREQRNEKSQAKLDDNTFQ 129

Query: 437 RRSGFSERKVYSPPASRKRPVFREKKIPVDSGDANPAATVTIMSSQIDHPPEKNERKEER 258
           RR GF+ER       SRKRP FREKKI VDSGDAN AA              K+ +KEER
Sbjct: 130 RRDGFTER-------SRKRPAFREKKIVVDSGDANVAAV-------------KSSQKEER 169

Query: 257 SSNPYHLGRPEKQFADDRAPNKDEARRDGFPSRERYRGNANGGNDNYRGRDKLIGRQGFR 78
           +SNP HL RPEK FADD    K EARR          G   GGND+Y+GRDK  GR+G+R
Sbjct: 170 NSNPQHLDRPEKHFADD----KGEARR----------GRRYGGNDSYKGRDKFNGRRGYR 215

Query: 77  PIKTQTEKWKHDLYQEVNKDPIPQN 3
                +EKWKHDLYQEVNKDPIPQN
Sbjct: 216 -----SEKWKHDLYQEVNKDPIPQN 235


>ref|XP_003538108.1| PREDICTED: uncharacterized protein LOC100781867 [Glycine max]
          Length = 249

 Score =  178 bits (451), Expect = 2e-42
 Identities = 110/207 (53%), Positives = 124/207 (59%), Gaps = 4/207 (1%)
 Frame = -2

Query: 611 QRDEQGSAGQDGRSSGQRKAGERGWWKDIKNQHNXXXXXXXXXR----DEKSQAKPEDDT 444
           Q +EQG  GQ GRSSGQRK  ERG WKD K + N              +EKSQAK +D+T
Sbjct: 70  QHNEQGGTGQVGRSSGQRK--ERGRWKDTKKRFNINEREEKNHGREQRNEKSQAKLDDNT 127

Query: 443 SRRRSGFSERKVYSPPASRKRPVFREKKIPVDSGDANPAATVTIMSSQIDHPPEKNERKE 264
            +RR GF+ R       SRKR  FREKKI  DSGDAN AA              K+ +KE
Sbjct: 128 FQRRDGFTGR-------SRKRASFREKKIVADSGDANVAAV-------------KSGQKE 167

Query: 263 ERSSNPYHLGRPEKQFADDRAPNKDEARRDGFPSRERYRGNANGGNDNYRGRDKLIGRQG 84
           ER+SNP HL RPEK FADD    K EARR          G   GGND+Y+GRDK  GRQG
Sbjct: 168 ERNSNPQHLDRPEKHFADD----KGEARR----------GRRYGGNDSYKGRDKFNGRQG 213

Query: 83  FRPIKTQTEKWKHDLYQEVNKDPIPQN 3
           +RP     EKWKHDLYQEVNKDPIP+N
Sbjct: 214 YRP-----EKWKHDLYQEVNKDPIPEN 235


Top