BLASTX nr result

ID: Glycyrrhiza23_contig00006881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006881
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   654   0.0  
ref|XP_003625193.1| Polygalacturonase [Medicago truncatula] gi|3...   646   0.0  
ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|2...   560   e-157
ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   530   e-148
ref|XP_004136584.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   528   e-148

>ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Glycine max]
          Length = 466

 Score =  654 bits (1686), Expect = 0.0
 Identities = 310/359 (86%), Positives = 333/359 (92%)
 Frame = -3

Query: 1287 ESWRWYVVVAENATXXXXXXXXXXXGQAEKFVVRQDPRKNVMVSWNHTGACLGDECRPRL 1108
            ESWRWYVVVAENAT           GQA KFVVR+DPRKNVMVSWN TGACLGDECRPRL
Sbjct: 107  ESWRWYVVVAENATDVGIRGGGAVDGQAAKFVVREDPRKNVMVSWNQTGACLGDECRPRL 166

Query: 1107 IGFIGCNNVRVSNITLNQPAYWCLHLVRSESISIQDVAIYGDLNIPNNDGIDIEDSNNTV 928
            IGF+ CNNV+VSNITLNQPAYWCLHLVRS +I IQD+AIYGD NIPNNDGIDIEDSNNTV
Sbjct: 167  IGFLDCNNVQVSNITLNQPAYWCLHLVRSNNICIQDIAIYGDFNIPNNDGIDIEDSNNTV 226

Query: 927  ITRCHIDTGDDAICPKTSTGPVFNLTVTNCWIRSKSSAIKLGSASWFDFKHFVFDNITIV 748
            ITRCHIDTGDDAICPK+STGPV+NLTVT+CWIRSKSSAIKLGSASWFDFKHFVFDNI IV
Sbjct: 227  ITRCHIDTGDDAICPKSSTGPVYNLTVTDCWIRSKSSAIKLGSASWFDFKHFVFDNIAIV 286

Query: 747  DSHRGIGFQIRDGGNVSDIVFSNINISTRYYDPSWWGRAEPIYVTTCPRNSTSKEASISN 568
            DSHRGIGFQIRDGGNVSDIVFSN+NISTRYYD  WWGRAEPIYVT+CPR+S+SKEASISN
Sbjct: 287  DSHRGIGFQIRDGGNVSDIVFSNMNISTRYYDSLWWGRAEPIYVTSCPRDSSSKEASISN 346

Query: 567  ILFINITADSENGIFLSGSKRGLLRNLRFINMNITYRRFTSYAGGLVDYRPGCQELVKHE 388
            +LFINITA+SENGIFLSGSKRGLLRNLRFI+M+ITYRRFT+YAGGL+DYRPGCQELVKH 
Sbjct: 347  VLFINITANSENGIFLSGSKRGLLRNLRFIDMDITYRRFTNYAGGLLDYRPGCQELVKHR 406

Query: 387  TAGMMMEHIEGLEVKNVEMRWETNQIEQWNNPMEFRPSTVNNIHFSNFNSVLYTNSKSS 211
            TAG+MMEHIEGLEVKNVEMRW  +Q+EQWNNP+EFRPSTVNNI F NFNS LYTNSKS+
Sbjct: 407  TAGIMMEHIEGLEVKNVEMRWSNDQLEQWNNPLEFRPSTVNNISFLNFNSGLYTNSKSN 465


>ref|XP_003625193.1| Polygalacturonase [Medicago truncatula] gi|355500208|gb|AES81411.1|
            Polygalacturonase [Medicago truncatula]
          Length = 482

 Score =  646 bits (1666), Expect = 0.0
 Identities = 308/359 (85%), Positives = 329/359 (91%)
 Frame = -3

Query: 1287 ESWRWYVVVAENATXXXXXXXXXXXGQAEKFVVRQDPRKNVMVSWNHTGACLGDECRPRL 1108
            ES RWYVV+AENAT           GQAEKFVVR + RKNVMVSWN TG CLGDECRPRL
Sbjct: 123  ESSRWYVVLAENATDVGIAGGGVVDGQAEKFVVRYNERKNVMVSWNQTGDCLGDECRPRL 182

Query: 1107 IGFIGCNNVRVSNITLNQPAYWCLHLVRSESISIQDVAIYGDLNIPNNDGIDIEDSNNTV 928
            IGF+GC NV+V N+TLNQPAYWCLHLVRSE+I+IQD+AIYGDLNIPNNDGIDIEDSNNTV
Sbjct: 183  IGFLGCKNVKVFNVTLNQPAYWCLHLVRSENITIQDIAIYGDLNIPNNDGIDIEDSNNTV 242

Query: 927  ITRCHIDTGDDAICPKTSTGPVFNLTVTNCWIRSKSSAIKLGSASWFDFKHFVFDNITIV 748
            ITRCHIDTGDDAICPK+STGPV NLTVTN WIRSKSSAIK GSASWF+FKHFVFDNITIV
Sbjct: 243  ITRCHIDTGDDAICPKSSTGPVHNLTVTNSWIRSKSSAIKFGSASWFEFKHFVFDNITIV 302

Query: 747  DSHRGIGFQIRDGGNVSDIVFSNINISTRYYDPSWWGRAEPIYVTTCPRNSTSKEASISN 568
            DSHRG+ FQIRDGGNVSDIVFSNI ISTRYYDP WWGRAEPIYVTTCPR+STSKEASISN
Sbjct: 303  DSHRGLAFQIRDGGNVSDIVFSNIKISTRYYDPLWWGRAEPIYVTTCPRDSTSKEASISN 362

Query: 567  ILFINITADSENGIFLSGSKRGLLRNLRFINMNITYRRFTSYAGGLVDYRPGCQELVKHE 388
            + FINITA+SENGIFLSGSKRGLLRNL FINMNITYRRFTSYAGG  DYRPGCQELVKH+
Sbjct: 363  VHFINITANSENGIFLSGSKRGLLRNLSFINMNITYRRFTSYAGGFFDYRPGCQELVKHK 422

Query: 387  TAGMMMEHIEGLEVKNVEMRWETNQIEQWNNPMEFRPSTVNNIHFSNFNSVLYTNSKSS 211
            TAG+MMEHIEGLEV+NVEMRWE N +EQWNNPMEF+PSTVNNIHFSNFNSV+Y+NSKSS
Sbjct: 423  TAGIMMEHIEGLEVRNVEMRWEKNDLEQWNNPMEFKPSTVNNIHFSNFNSVVYSNSKSS 481


>ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|222867323|gb|EEF04454.1|
            predicted protein [Populus trichocarpa]
          Length = 445

 Score =  560 bits (1442), Expect = e-157
 Identities = 262/350 (74%), Positives = 297/350 (84%)
 Frame = -3

Query: 1278 RWYVVVAENATXXXXXXXXXXXGQAEKFVVRQDPRKNVMVSWNHTGACLGDECRPRLIGF 1099
            RWYVV+AENA+           GQ  KFV R + RKNVMVSWN TGACLGDECRPRL+GF
Sbjct: 93   RWYVVLAENASDVGITGGGVVDGQGLKFVKRFNERKNVMVSWNSTGACLGDECRPRLVGF 152

Query: 1098 IGCNNVRVSNITLNQPAYWCLHLVRSESISIQDVAIYGDLNIPNNDGIDIEDSNNTVITR 919
            IGC NV+V N+ L++PAYWCLH+V+  +  I DV+IYGD N PNNDGIDIEDSNNT+ITR
Sbjct: 153  IGCTNVKVWNVRLSEPAYWCLHIVQCLNTHISDVSIYGDFNSPNNDGIDIEDSNNTLITR 212

Query: 918  CHIDTGDDAICPKTSTGPVFNLTVTNCWIRSKSSAIKLGSASWFDFKHFVFDNITIVDSH 739
            CHIDTGDDAICPKT TGP++NLT T+CWIR+KSSAIKLGSASWF+FK  VFDNITIVDSH
Sbjct: 213  CHIDTGDDAICPKTYTGPIYNLTATDCWIRTKSSAIKLGSASWFEFKGLVFDNITIVDSH 272

Query: 738  RGIGFQIRDGGNVSDIVFSNINISTRYYDPSWWGRAEPIYVTTCPRNSTSKEASISNILF 559
            RG+G QIRDGGNVSDI FSNINISTRYYDPSWWGRAEPIYVTTCPR+S+SKE SISN+ F
Sbjct: 273  RGLGLQIRDGGNVSDITFSNINISTRYYDPSWWGRAEPIYVTTCPRHSSSKEGSISNLQF 332

Query: 558  INITADSENGIFLSGSKRGLLRNLRFINMNITYRRFTSYAGGLVDYRPGCQELVKHETAG 379
            INIT +SENG+FLSGSK GLL NLRFINMN+T+RR+T+Y GGLVDYRPGCQ LV H  AG
Sbjct: 333  INITTNSENGVFLSGSKGGLLSNLRFINMNLTFRRWTTYPGGLVDYRPGCQGLVNHSAAG 392

Query: 378  MMMEHIEGLEVKNVEMRWETNQIEQWNNPMEFRPSTVNNIHFSNFNSVLY 229
            ++MEHIEG EV+NV MRW   Q E W+NP++FRPSTVNNI F NF+S LY
Sbjct: 393  IIMEHIEGFEVENVNMRWSDYQNEPWDNPLDFRPSTVNNISFLNFHSALY 442


>ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis sativus]
          Length = 463

 Score =  530 bits (1366), Expect = e-148
 Identities = 249/351 (70%), Positives = 288/351 (82%), Gaps = 1/351 (0%)
 Frame = -3

Query: 1287 ESWRWYVVVAENATXXXXXXXXXXXGQAEKFVVRQDPRKNVMVSWNHTGACLGDECRPRL 1108
            +S RW+ VVAENA+           GQ  KFV + D RKNVMVSWN TGAC GDECRP L
Sbjct: 108  DSSRWFAVVAENASDVGISGGGTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDL 167

Query: 1107 IGFIGCNNVRVSNITLNQPAYWCLHLVRSESISIQDVAIYGDLNIPNNDGIDIEDSNNTV 928
            +GFIG N VRVSN++ NQPA+WCLHLVR E+  I+DV+IYGD + PNNDGIDIEDSNNT+
Sbjct: 168  VGFIGSNKVRVSNVSFNQPAHWCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTL 227

Query: 927  ITRCHIDTGDDAICPKTSTGPVFNLTVTNCWIRSKSSAIKLGSASWFDFKHFVFDNITIV 748
            ITRC IDTGDDAICPK+S GPVFNLT TNCWIR+KSSAIKLGSASWF+F   +FDN+TIV
Sbjct: 228  ITRCRIDTGDDAICPKSSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTIV 287

Query: 747  DSHRGIGFQIRDGGNVSDIVFSNINISTRYYDPSWWGRAEPIYVTTCPRNSTSKEASISN 568
            DSHRG+ FQ+RDGG+ +DI FSNINI+TRYYDPSWWGRAEPIYVTTCPR+  SKE SISN
Sbjct: 288  DSHRGLAFQLRDGGSANDITFSNINITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISN 347

Query: 567  ILFINITADSENGIFLSGSKRGLLRNLRFINMNITYRRFTSYAGGLVDYRPGCQELVKHE 388
            I FINITA SENG+FLSGSK G+L NLRF N+ + Y+R+T Y GG+ DYRPGCQ  VKH 
Sbjct: 348  IRFINITATSENGVFLSGSKSGVLSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHG 407

Query: 387  TAGMMMEHIEGLEVKNVEMRW-ETNQIEQWNNPMEFRPSTVNNIHFSNFNS 238
             AGM+MEHIEGL ++NV+M W +TN   QWNNP++FRPSTVNNI F NF+S
Sbjct: 408  MAGMIMEHIEGLNLENVDMHWFDTNGSLQWNNPLDFRPSTVNNISFFNFHS 458


>ref|XP_004136584.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis sativus]
          Length = 463

 Score =  528 bits (1361), Expect = e-148
 Identities = 248/351 (70%), Positives = 287/351 (81%), Gaps = 1/351 (0%)
 Frame = -3

Query: 1287 ESWRWYVVVAENATXXXXXXXXXXXGQAEKFVVRQDPRKNVMVSWNHTGACLGDECRPRL 1108
            +S RW+ VVAENA+           GQ  KFV + D RKNVMVSWN TGAC GDECRP L
Sbjct: 108  DSSRWFAVVAENASDVGISGGGTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDL 167

Query: 1107 IGFIGCNNVRVSNITLNQPAYWCLHLVRSESISIQDVAIYGDLNIPNNDGIDIEDSNNTV 928
            +GFIG N VRVSN++ NQPA+WCLHLVR E+  I+DV+IYGD + PNNDGIDIEDSNNT+
Sbjct: 168  VGFIGSNKVRVSNVSFNQPAHWCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTL 227

Query: 927  ITRCHIDTGDDAICPKTSTGPVFNLTVTNCWIRSKSSAIKLGSASWFDFKHFVFDNITIV 748
            ITRC IDTGDDAICPK+S GPVFNLT TNCWIR+KSSAIKLGSASWF+F   +FDN+TIV
Sbjct: 228  ITRCRIDTGDDAICPKSSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTIV 287

Query: 747  DSHRGIGFQIRDGGNVSDIVFSNINISTRYYDPSWWGRAEPIYVTTCPRNSTSKEASISN 568
            DSHRG+ FQ+RDGG+ +DI FSNINI+TRYYDPSWWGRAEPIYVTTCPR+  SKE SISN
Sbjct: 288  DSHRGLAFQLRDGGSANDITFSNINITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISN 347

Query: 567  ILFINITADSENGIFLSGSKRGLLRNLRFINMNITYRRFTSYAGGLVDYRPGCQELVKHE 388
            I F NITA SENG+FLSGSK G+L NLRF N+ + Y+R+T Y GG+ DYRPGCQ  VKH 
Sbjct: 348  IRFTNITATSENGVFLSGSKSGVLSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHG 407

Query: 387  TAGMMMEHIEGLEVKNVEMRW-ETNQIEQWNNPMEFRPSTVNNIHFSNFNS 238
             AGM+MEHIEGL ++NV+M W +TN   QWNNP++FRPSTVNNI F NF+S
Sbjct: 408  MAGMIMEHIEGLNLENVDMHWFDTNGSLQWNNPLDFRPSTVNNISFLNFHS 458


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