BLASTX nr result

ID: Glycyrrhiza23_contig00006870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006870
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521595.1| PREDICTED: cytochrome c oxidase subunit 5C-l...   136   2e-30
ref|XP_003625971.1| Cytochrome c oxidase subunit 5C [Medicago tr...   126   2e-27
gb|AFK48388.1| unknown [Lotus japonicus]                              122   3e-26
ref|XP_003518793.1| PREDICTED: cytochrome c oxidase subunit 5C-2...   122   3e-26
gb|ACU15919.1| unknown [Glycine max]                                  121   7e-26

>ref|XP_003521595.1| PREDICTED: cytochrome c oxidase subunit 5C-like [Glycine max]
          Length = 103

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/84 (82%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
 Frame = +1

Query: 7   RKRSPASASELTSL-KAGKQMAGPRIAHATLKGPSVVKEICIGIVLGLAAGSVWKMHHWN 183
           +KRS AS SE+  L K  KQMAGPRIAHATLKGPSVVKEICIG+VLGLAAGSVWKMHHWN
Sbjct: 20  KKRSSASTSEIDKLLKTVKQMAGPRIAHATLKGPSVVKEICIGMVLGLAAGSVWKMHHWN 79

Query: 184 EQRKARTFYDLLEKGEISVVAEGE 255
           EQRK R FYDLLEK EISVVA+ E
Sbjct: 80  EQRKTRAFYDLLEKDEISVVADEE 103


>ref|XP_003625971.1| Cytochrome c oxidase subunit 5C [Medicago truncatula]
           gi|355500986|gb|AES82189.1| Cytochrome c oxidase subunit
           5C [Medicago truncatula] gi|388519391|gb|AFK47757.1|
           unknown [Medicago truncatula]
          Length = 64

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/64 (93%), Positives = 62/64 (96%)
 Frame = +1

Query: 64  MAGPRIAHATLKGPSVVKEICIGIVLGLAAGSVWKMHHWNEQRKARTFYDLLEKGEISVV 243
           MAGPRIAHATLKGPSVVKEICIGIVLGLAAGSVWKMHHWNEQRK RTF+DLLEKGEISV+
Sbjct: 1   MAGPRIAHATLKGPSVVKEICIGIVLGLAAGSVWKMHHWNEQRKTRTFHDLLEKGEISVI 60

Query: 244 AEGE 255
           AE E
Sbjct: 61  AEEE 64


>gb|AFK48388.1| unknown [Lotus japonicus]
          Length = 64

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/64 (92%), Positives = 60/64 (93%)
 Frame = +1

Query: 64  MAGPRIAHATLKGPSVVKEICIGIVLGLAAGSVWKMHHWNEQRKARTFYDLLEKGEISVV 243
           MAGPRIAHATLKGPSVVKEI IG+VLGLAAGSVWKMHHWNEQRK RTFYDLLEKGEI VV
Sbjct: 1   MAGPRIAHATLKGPSVVKEIVIGMVLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEIGVV 60

Query: 244 AEGE 255
           AE E
Sbjct: 61  AEEE 64


>ref|XP_003518793.1| PREDICTED: cytochrome c oxidase subunit 5C-2 [Glycine max]
          Length = 64

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/62 (95%), Positives = 59/62 (95%)
 Frame = +1

Query: 64  MAGPRIAHATLKGPSVVKEICIGIVLGLAAGSVWKMHHWNEQRKARTFYDLLEKGEISVV 243
           MAGPRIAHATLKGPSVVKEI IGI LGLAAGSVWKMHHWNEQRK RTFYDLLEKGEISVV
Sbjct: 1   MAGPRIAHATLKGPSVVKEIIIGITLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEISVV 60

Query: 244 AE 249
           AE
Sbjct: 61  AE 62


>gb|ACU15919.1| unknown [Glycine max]
          Length = 64

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/62 (93%), Positives = 59/62 (95%)
 Frame = +1

Query: 64  MAGPRIAHATLKGPSVVKEICIGIVLGLAAGSVWKMHHWNEQRKARTFYDLLEKGEISVV 243
           MAGPRIAHATL+GPSVVKEI IGI LGLAAGSVWKMHHWNEQRK RTFYDLLEKGEISVV
Sbjct: 1   MAGPRIAHATLRGPSVVKEIIIGITLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEISVV 60

Query: 244 AE 249
           AE
Sbjct: 61  AE 62


Top