BLASTX nr result

ID: Glycyrrhiza23_contig00006869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006869
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521595.1| PREDICTED: cytochrome c oxidase subunit 5C-l...   105   8e-21
ref|XP_003518793.1| PREDICTED: cytochrome c oxidase subunit 5C-2...   103   5e-20
gb|AFK48388.1| unknown [Lotus japonicus]                              102   7e-20
ref|XP_003625971.1| Cytochrome c oxidase subunit 5C [Medicago tr...   102   1e-19
gb|ACU15919.1| unknown [Glycine max]                                  102   1e-19

>ref|XP_003521595.1| PREDICTED: cytochrome c oxidase subunit 5C-like [Glycine max]
          Length = 103

 Score =  105 bits (263), Expect = 8e-21
 Identities = 56/103 (54%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
 Frame = +1

Query: 76  VLLCLSVSASSTPWTTFVFARASEFTS------LTTKKQMAGPRIAHATLKGPSVVKEXX 237
           ++ CL ++ ++  +   V  + S  ++      L T KQMAGPRIAHATLKGPSVVKE  
Sbjct: 1   MICCLLLTPNTIEYRPIVAKKRSSASTSEIDKLLKTVKQMAGPRIAHATLKGPSVVKEIC 60

Query: 238 XXXXXXXXXXSVWKMHHWNEQRKARTFYDLLEKGEISVVAEEE 366
                     SVWKMHHWNEQRK R FYDLLEK EISVVA+EE
Sbjct: 61  IGMVLGLAAGSVWKMHHWNEQRKTRAFYDLLEKDEISVVADEE 103


>ref|XP_003518793.1| PREDICTED: cytochrome c oxidase subunit 5C-2 [Glycine max]
          Length = 64

 Score =  103 bits (256), Expect = 5e-20
 Identities = 50/64 (78%), Positives = 51/64 (79%)
 Frame = +1

Query: 175 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKARTFYDLLEKGEISVV 354
           MAGPRIAHATLKGPSVVKE            SVWKMHHWNEQRK RTFYDLLEKGEISVV
Sbjct: 1   MAGPRIAHATLKGPSVVKEIIIGITLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEISVV 60

Query: 355 AEEE 366
           AEE+
Sbjct: 61  AEEQ 64


>gb|AFK48388.1| unknown [Lotus japonicus]
          Length = 64

 Score =  102 bits (255), Expect = 7e-20
 Identities = 50/64 (78%), Positives = 50/64 (78%)
 Frame = +1

Query: 175 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKARTFYDLLEKGEISVV 354
           MAGPRIAHATLKGPSVVKE            SVWKMHHWNEQRK RTFYDLLEKGEI VV
Sbjct: 1   MAGPRIAHATLKGPSVVKEIVIGMVLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEIGVV 60

Query: 355 AEEE 366
           AEEE
Sbjct: 61  AEEE 64


>ref|XP_003625971.1| Cytochrome c oxidase subunit 5C [Medicago truncatula]
           gi|355500986|gb|AES82189.1| Cytochrome c oxidase subunit
           5C [Medicago truncatula] gi|388519391|gb|AFK47757.1|
           unknown [Medicago truncatula]
          Length = 64

 Score =  102 bits (253), Expect = 1e-19
 Identities = 49/64 (76%), Positives = 51/64 (79%)
 Frame = +1

Query: 175 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKARTFYDLLEKGEISVV 354
           MAGPRIAHATLKGPSVVKE            SVWKMHHWNEQRK RTF+DLLEKGEISV+
Sbjct: 1   MAGPRIAHATLKGPSVVKEICIGIVLGLAAGSVWKMHHWNEQRKTRTFHDLLEKGEISVI 60

Query: 355 AEEE 366
           AEEE
Sbjct: 61  AEEE 64


>gb|ACU15919.1| unknown [Glycine max]
          Length = 64

 Score =  102 bits (253), Expect = 1e-19
 Identities = 49/64 (76%), Positives = 51/64 (79%)
 Frame = +1

Query: 175 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKARTFYDLLEKGEISVV 354
           MAGPRIAHATL+GPSVVKE            SVWKMHHWNEQRK RTFYDLLEKGEISVV
Sbjct: 1   MAGPRIAHATLRGPSVVKEIIIGITLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEISVV 60

Query: 355 AEEE 366
           AEE+
Sbjct: 61  AEEQ 64


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