BLASTX nr result

ID: Glycyrrhiza23_contig00006815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006815
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553228.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   417   e-114
ref|XP_003628623.1| DEAD-box ATP-dependent RNA helicase [Medicag...   407   e-111
ref|XP_003530661.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   406   e-111
ref|XP_002266408.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   287   2e-75
ref|XP_004155399.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   281   1e-73

>ref|XP_003553228.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22-like [Glycine
           max]
          Length = 579

 Score =  417 bits (1071), Expect = e-114
 Identities = 228/302 (75%), Positives = 252/302 (83%), Gaps = 1/302 (0%)
 Frame = +2

Query: 32  MIITRTSALVLHLQNPPIRYHQFFFSHFTHSLLCNPTSVSSRFINPK-PRSFFSSQTRAF 208
           MI+TR SAL+LHLQNPPIRYH  FFSHF+++    PT    R  +P  PR    +QTR F
Sbjct: 1   MIVTR-SALMLHLQNPPIRYH--FFSHFSYAPTF-PTLFKPRPFSPTTPRQ---AQTRTF 53

Query: 209 GXXXXXXXXXPEEGSKGARDTFFAEESVLWSSLGLSDTLSHALSNIGLHRPSLVQASSIP 388
                        GS G RDTFFAEE+V WSSLGLSDT+S ALSNIGL+RPSLVQASS+P
Sbjct: 54  -VSAVASSSSAAHGSNG-RDTFFAEENVSWSSLGLSDTISRALSNIGLNRPSLVQASSVP 111

Query: 389 SVLSGKDVVIAAETGSGKTYSYLVPLIDKLREAEEHSLHAGSDQEVSPSRKVLLVLCPNV 568
           SVL GKDV+IAAETGSGKTYSYLVPLIDKLR+A+EHSLHA  DQ+V+  + VLLVLCPNV
Sbjct: 112 SVLLGKDVIIAAETGSGKTYSYLVPLIDKLRDAQEHSLHAVLDQKVTSPQNVLLVLCPNV 171

Query: 569 QLCEQVVRMANSLCRDNGETIVSVAAICGRQGWPIQEPDVIVTTPAALLNYVDVDRHRRM 748
           QLCEQVVRMANSLCRD+GETIVSVAAICG+QGWPI+EPDVIVTTPAALLNYVD+DR RRM
Sbjct: 172 QLCEQVVRMANSLCRDDGETIVSVAAICGKQGWPIREPDVIVTTPAALLNYVDLDRTRRM 231

Query: 749 EFMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKVSVTKLPMELESSLSS 928
           EFMRGVKYVVFDEAD+LLCGSFQNKVIRLINLLRFDEKLLSRSK SV + PM+ E SLSS
Sbjct: 232 EFMRGVKYVVFDEADLLLCGSFQNKVIRLINLLRFDEKLLSRSKKSVAEFPMKQEFSLSS 291

Query: 929 HD 934
            D
Sbjct: 292 ED 293


>ref|XP_003628623.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355522645|gb|AET03099.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 594

 Score =  407 bits (1047), Expect = e-111
 Identities = 228/312 (73%), Positives = 250/312 (80%), Gaps = 11/312 (3%)
 Frame = +2

Query: 32  MIITRTSALVLHLQNPPIRYHQFFF-SHFTHSLLCNPT--SVSSRFINPKPRSFFS---- 190
           M +TR SAL LHLQN PIRYHQFFF S F ++L+ NPT  S SS   N     FFS    
Sbjct: 1   MNVTR-SALKLHLQNSPIRYHQFFFFSRFNNALIRNPTFSSSSSSLFNFNATRFFSVTLP 59

Query: 191 ---SQTRAFGXXXXXXXXXPEEGSKGARDTFFAEESVLWSSLGLSDTLSHALSNIGLHRP 361
               QT+ F            E   G RDTFFAE++V WSS+GLS TLS ALSNI L+ P
Sbjct: 60  RQTHQTQPF-----VGSAVSSEDFNG-RDTFFAEDNVSWSSIGLSHTLSRALSNIALNTP 113

Query: 362 SLVQASSIPSVLSGKDVVIAAETGSGKTYSYLVPLIDKLREAEEHSLHAGSDQEVSP-SR 538
           SLVQASSIPSVLSGKDVVIAAETGSGKTYSYL+PLIDKLR  EE+SL   SD+E+SP +R
Sbjct: 114 SLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIDKLRGTEEYSLDVVSDKEISPPAR 173

Query: 539 KVLLVLCPNVQLCEQVVRMANSLCRDNGETIVSVAAICGRQGWPIQEPDVIVTTPAALLN 718
           KVLLVLCPNVQLCEQVVRMANSLC DN ETIVS AAICG+QGWPI+EPD+IVTTPAALLN
Sbjct: 174 KVLLVLCPNVQLCEQVVRMANSLCGDNDETIVSAAAICGKQGWPIREPDIIVTTPAALLN 233

Query: 719 YVDVDRHRRMEFMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKVSVTKL 898
           +VDVDR RRMEFM GVKYVVFDEADMLLCGSFQNKVIRLINLLR+DEKLLSRSK SV++L
Sbjct: 234 HVDVDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKVIRLINLLRYDEKLLSRSKTSVSEL 293

Query: 899 PMELESSLSSHD 934
           P+ LESSLSSHD
Sbjct: 294 PVTLESSLSSHD 305


>ref|XP_003530661.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22-like [Glycine
           max]
          Length = 577

 Score =  406 bits (1044), Expect = e-111
 Identities = 224/302 (74%), Positives = 249/302 (82%), Gaps = 1/302 (0%)
 Frame = +2

Query: 32  MIITRTSALVLHLQNPPIRYHQFFFSHFTHSLLCNPTSVSSRFIN-PKPRSFFSSQTRAF 208
           MI+TR SAL+LHLQNPPIRYH  FFSHF+ +    P+    RF +   PR    +QTR F
Sbjct: 1   MIVTR-SALMLHLQNPPIRYH--FFSHFSLAPTF-PSLFKPRFFSITTPRQ---AQTRTF 53

Query: 209 GXXXXXXXXXPEEGSKGARDTFFAEESVLWSSLGLSDTLSHALSNIGLHRPSLVQASSIP 388
                       +GS G RDTFFAEE+V WSSLGLSDT+S ALSNIGL+RPSLVQASS+P
Sbjct: 54  ---VSAVASSSSQGSNG-RDTFFAEENVSWSSLGLSDTISRALSNIGLNRPSLVQASSVP 109

Query: 389 SVLSGKDVVIAAETGSGKTYSYLVPLIDKLREAEEHSLHAGSDQEVSPSRKVLLVLCPNV 568
           SVLSGKDV+IAAETGSGKTYSYLVPLIDKLR  +E SL A SD+EV+   KVLLVLCPNV
Sbjct: 110 SVLSGKDVIIAAETGSGKTYSYLVPLIDKLRVTQERSLLAVSDREVTSLHKVLLVLCPNV 169

Query: 569 QLCEQVVRMANSLCRDNGETIVSVAAICGRQGWPIQEPDVIVTTPAALLNYVDVDRHRRM 748
           QLCEQVVRMANSLC+D+ ETIVS AAICG+QGWPI+EPDVIVTTPAALLNYVD+DR RR+
Sbjct: 170 QLCEQVVRMANSLCKDDSETIVSAAAICGKQGWPIREPDVIVTTPAALLNYVDLDRTRRV 229

Query: 749 EFMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKVSVTKLPMELESSLSS 928
           EFMRGVKYVVFDEAD+LLCGSFQNKVIRLINLLRFDEKLLSRSK SV + PM+ ESSLSS
Sbjct: 230 EFMRGVKYVVFDEADLLLCGSFQNKVIRLINLLRFDEKLLSRSKKSVAEFPMKQESSLSS 289

Query: 929 HD 934
            D
Sbjct: 290 ED 291


>ref|XP_002266408.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22 [Vitis vinifera]
           gi|296086509|emb|CBI32098.3| unnamed protein product
           [Vitis vinifera]
          Length = 593

 Score =  287 bits (735), Expect = 2e-75
 Identities = 149/249 (59%), Positives = 182/249 (73%), Gaps = 3/249 (1%)
 Frame = +2

Query: 194 QTRAFGXXXXXXXXXPEEGSKGARDTFFAEESVLWSSLGLSDTLSHALSNIGLHRPSLVQ 373
           +TRAFG              +   +TFFA++ V W+SLG+SD L+ ALS IG+ RPSLVQ
Sbjct: 58  RTRAFGTASAASQ------DRNGAETFFADQGVSWASLGVSDRLTRALSTIGIERPSLVQ 111

Query: 374 ASSIPSVLSGKDVVIAAETGSGKTYSYLVPLIDKLREAEEHSLHAGSDQEVSPSRKVLLV 553
           A+ IP +LSG DVV+AAETGSGKT+ YLVPLIDKL      S+ A +DQE     ++ LV
Sbjct: 112 AACIPYILSGNDVVVAAETGSGKTHGYLVPLIDKLCGTPNDSVDASTDQESRHLHQLCLV 171

Query: 554 LCPNVQLCEQVVRMANSLCRDNGETIVSVAAICGRQGWPIQEPDVIVTTPAAL---LNYV 724
           LCPNV LCEQVV+MAN LC DNGE ++ V A+CGRQGWP++EPD+IV+TPAA    LN +
Sbjct: 172 LCPNVMLCEQVVQMANCLCGDNGEPLLRVVAVCGRQGWPVKEPDIIVSTPAAFLNNLNAI 231

Query: 725 DVDRHRRMEFMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKVSVTKLPM 904
           D ++ RR  F+RGVK VVFDEADMLLCGSFQN+VIRLI++LRFDEK+LSR K SV    M
Sbjct: 232 DPEKQRRSNFLRGVKCVVFDEADMLLCGSFQNQVIRLIDMLRFDEKILSRIKKSVPDKQM 291

Query: 905 ELESSLSSH 931
           ELES    H
Sbjct: 292 ELESDSMLH 300


>ref|XP_004155399.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22-like [Cucumis
           sativus]
          Length = 591

 Score =  281 bits (720), Expect = 1e-73
 Identities = 155/289 (53%), Positives = 198/289 (68%)
 Frame = +2

Query: 50  SALVLHLQNPPIRYHQFFFSHFTHSLLCNPTSVSSRFINPKPRSFFSSQTRAFGXXXXXX 229
           S   LHL+   +     F     +S L  P S S R      R   S Q+RA G      
Sbjct: 6   SVSALHLERLTLSSKLLF--SLKNSNLLVPNSCSIRIGLVCLRQACSRQSRAVGTVAASA 63

Query: 230 XXXPEEGSKGARDTFFAEESVLWSSLGLSDTLSHALSNIGLHRPSLVQASSIPSVLSGKD 409
                +G    +DTF+A E V W+SLG+SDT+S AL ++G+ RPSL+QA+ +PS++SG D
Sbjct: 64  ASTAADGI--GKDTFYAAEGVSWTSLGVSDTVSRALGSVGMQRPSLIQAACVPSIMSGND 121

Query: 410 VVIAAETGSGKTYSYLVPLIDKLREAEEHSLHAGSDQEVSPSRKVLLVLCPNVQLCEQVV 589
           VVIAAETGSGKT+ YLVPLI+K+            D ++    K+ LVLCPNV LCEQVV
Sbjct: 122 VVIAAETGSGKTHGYLVPLINKICCEHGEDKLTDGDHDLPSLNKLSLVLCPNVMLCEQVV 181

Query: 590 RMANSLCRDNGETIVSVAAICGRQGWPIQEPDVIVTTPAALLNYVDVDRHRRMEFMRGVK 769
           +MAN+LC ++G++I+ VAAICGRQGWP+ +PD++V+TPAALLNY++ +R RR  F+R VK
Sbjct: 182 QMANALCDEHGKSILRVAAICGRQGWPVHKPDIVVSTPAALLNYIEPNRSRRSAFLRAVK 241

Query: 770 YVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKVSVTKLPMELES 916
           +VVFDEADMLL GSFQNKVIRLINLLRF+EKLLSRSK    KL M LE+
Sbjct: 242 HVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKEFPEKL-MGLEA 289


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