BLASTX nr result

ID: Glycyrrhiza23_contig00006736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006736
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containin...   261   3e-68
ref|XP_003516267.1| PREDICTED: zinc finger CCCH domain-containin...   253   1e-65
emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]   250   1e-64
ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containin...   246   2e-63
ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containin...   236   2e-60

>ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           isoform 1 [Glycine max] gi|356520842|ref|XP_003529069.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           20-like isoform 2 [Glycine max]
          Length = 359

 Score =  261 bits (668), Expect = 3e-68
 Identities = 124/154 (80%), Positives = 134/154 (87%), Gaps = 3/154 (1%)
 Frame = -2

Query: 455 MMLGEHHRANPHPTVHVPPWPIDNDPTAEMYSPY---DGNAGGEYSPYYLGEALAALQRY 285
           MMLGEHHRANP  TVHVPPWP  +DPTAEMYS +   D NAG EYSPYYL EAL ALQR+
Sbjct: 1   MMLGEHHRANP--TVHVPPWPTHDDPTAEMYSAFLTNDVNAG-EYSPYYLQEALTALQRF 57

Query: 284 LPSNELDAESDSEAVTGREPDAPVDAYTCDHFRMFEFKVRRCARGRSHDWTECPYAHPGE 105
           LPSNE DA+SD+EA    +PDA VDAY+CDHFRM+EFKVRRCARGRSHDWTECPYAHPGE
Sbjct: 58  LPSNETDADSDTEA----QPDAAVDAYSCDHFRMYEFKVRRCARGRSHDWTECPYAHPGE 113

Query: 104 KARRRDPRKFHYSGTACPDFRKGNCKKGDACEYA 3
           KARRRDPRKFHYSG ACP+FRKGNCKKGD CE+A
Sbjct: 114 KARRRDPRKFHYSGAACPEFRKGNCKKGDTCEFA 147


>ref|XP_003516267.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 350

 Score =  253 bits (645), Expect = 1e-65
 Identities = 120/154 (77%), Positives = 131/154 (85%), Gaps = 3/154 (1%)
 Frame = -2

Query: 455 MMLGEHHRANPHPTVHVPPWPIDNDPTAEMYSPY---DGNAGGEYSPYYLGEALAALQRY 285
           MMLGEHHR NP  TV VPPWP  +DPTAEMYS +   D NAG EYSPY+L EAL ALQR+
Sbjct: 1   MMLGEHHRGNP--TVLVPPWPAHDDPTAEMYSAFLTNDVNAG-EYSPYHLQEALTALQRF 57

Query: 284 LPSNELDAESDSEAVTGREPDAPVDAYTCDHFRMFEFKVRRCARGRSHDWTECPYAHPGE 105
           LPSNE DA+SDS      +PDA VDAYTCDHFRM+EFKVRRCARGRSHDWTECPYAHPGE
Sbjct: 58  LPSNETDADSDSSEAA--QPDAAVDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGE 115

Query: 104 KARRRDPRKFHYSGTACPDFRKGNCKKGDACEYA 3
           KARRRDPR+FHYSG ACP+FRKGNC+KGDACE+A
Sbjct: 116 KARRRDPRRFHYSGVACPEFRKGNCRKGDACEFA 149


>emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]
          Length = 460

 Score =  250 bits (638), Expect = 1e-64
 Identities = 117/168 (69%), Positives = 136/168 (80%), Gaps = 13/168 (7%)
 Frame = -2

Query: 467 KKTKMMLGEHHRANPHPTVHVPPWPIDNDPTAEMYSPY-------------DGNAGGEYS 327
           ++ KMM+GE  R  P+PTV VPPWP  +DPT ++  PY             +G  GGE+S
Sbjct: 37  QRIKMMIGESRR--PNPTVLVPPWPHFDDPTVDISFPYPVSGVSVNSNANANGLQGGEHS 94

Query: 326 PYYLGEALAALQRYLPSNELDAESDSEAVTGREPDAPVDAYTCDHFRMFEFKVRRCARGR 147
           P+ LGEAL ALQRYLPSN++D +SDS+ ++GRE D PVDAY+CDHFRMFEFKVRRCARGR
Sbjct: 95  PFLLGEALTALQRYLPSNDVDVDSDSD-ISGREADIPVDAYSCDHFRMFEFKVRRCARGR 153

Query: 146 SHDWTECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDACEYA 3
           SHDWTECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGD+CE+A
Sbjct: 154 SHDWTECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFA 201


>ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 388

 Score =  246 bits (627), Expect = 2e-63
 Identities = 115/164 (70%), Positives = 133/164 (81%), Gaps = 13/164 (7%)
 Frame = -2

Query: 455 MMLGEHHRANPHPTVHVPPWPIDNDPTAEMYSPY-------------DGNAGGEYSPYYL 315
           MM+GE    +P+PTV VPPWP  +DPT ++  PY             +G  GGE+SP+ L
Sbjct: 1   MMIGESR--HPNPTVLVPPWPHFDDPTVDISFPYPVSGVSVNSNANANGLQGGEHSPFLL 58

Query: 314 GEALAALQRYLPSNELDAESDSEAVTGREPDAPVDAYTCDHFRMFEFKVRRCARGRSHDW 135
           GEAL ALQRYLPSN++D +SDS+ ++GRE D PVDAY+CDHFRMFEFKVRRCARGRSHDW
Sbjct: 59  GEALTALQRYLPSNDVDVDSDSD-ISGREADIPVDAYSCDHFRMFEFKVRRCARGRSHDW 117

Query: 134 TECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDACEYA 3
           TECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGD+CE+A
Sbjct: 118 TECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFA 161


>ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 355

 Score =  236 bits (601), Expect = 2e-60
 Identities = 116/151 (76%), Positives = 124/151 (82%)
 Frame = -2

Query: 455 MMLGEHHRANPHPTVHVPPWPIDNDPTAEMYSPYDGNAGGEYSPYYLGEALAALQRYLPS 276
           MMLGE HRANP  TVHVPPW      T E++SPY GNA  +YSPY L EAL+ALQ Y   
Sbjct: 1   MMLGETHRANP--TVHVPPW------TPEIFSPYTGNA--DYSPYSLQEALSALQHY--- 47

Query: 275 NELDAESDSEAVTGREPDAPVDAYTCDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKAR 96
              DAESDSE    REP+ PVDAY+CDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKAR
Sbjct: 48  ESTDAESDSE-FPSREPEVPVDAYSCDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKAR 106

Query: 95  RRDPRKFHYSGTACPDFRKGNCKKGDACEYA 3
           RRDPRK+HYSGTACPDFRKG+CKKGDACEYA
Sbjct: 107 RRDPRKYHYSGTACPDFRKGSCKKGDACEYA 137


Top