BLASTX nr result

ID: Glycyrrhiza23_contig00006723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00006723
         (1944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608138.1| Heterogeneous nuclear ribonucleoprotein A3-l...   424   e-116
ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816...   408   e-111
ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-lik...   404   e-110
ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, ...   330   1e-87
ref|XP_002305079.1| predicted protein [Populus trichocarpa] gi|2...   321   4e-85

>ref|XP_003608138.1| Heterogeneous nuclear ribonucleoprotein A3-like protein [Medicago
            truncatula] gi|355509193|gb|AES90335.1| Heterogeneous
            nuclear ribonucleoprotein A3-like protein [Medicago
            truncatula]
          Length = 401

 Score =  424 bits (1089), Expect = e-116
 Identities = 224/295 (75%), Positives = 248/295 (84%), Gaps = 3/295 (1%)
 Frame = -3

Query: 1861 MDFSKKRKTEENGDANSPPPSAEXXXXXXXXTLASEDIRRILQPFTQEQLLDLLQSASLR 1682
            M+F KKRKTEENGDANSPP S +         L S+DIR+ILQPFTQEQLLDLLQSASL+
Sbjct: 1    MEF-KKRKTEENGDANSPPSSIDAAVIPPA--LTSDDIRKILQPFTQEQLLDLLQSASLQ 57

Query: 1681 HPDVLDAVRSVADRDTTLRKLFVRGLAGDTTTDTLRAVFSAYGDLDEAIVIFDKSTGRSK 1502
            HPD+LDAVRSVADRDTT RKLFVRGL+G+TTT+TLR VFS+YGDLDEAIVIFDK+TGRSK
Sbjct: 58   HPDILDAVRSVADRDTTRRKLFVRGLSGETTTETLRTVFSSYGDLDEAIVIFDKATGRSK 117

Query: 1501 GYGFVVFRHVDGAILALKEPSKKIDGRMTVTQLAAAGAGSTGGDVSARKVFVGNVPFEIS 1322
            GYGFVV+RHVDGA+LALKEPSKKIDGRMTVTQLAA  AGSTGGDVS+RKVFVGNVPFE+S
Sbjct: 118  GYGFVVYRHVDGAVLALKEPSKKIDGRMTVTQLAA--AGSTGGDVSSRKVFVGNVPFEVS 175

Query: 1321 SERLLSEFLKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGARASLMEPLKTIEGHQVIC 1142
            +E LLSEF KYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGA+ S+ E +KT++GHQVIC
Sbjct: 176  AESLLSEFSKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGAKNSVAESMKTVDGHQVIC 235

Query: 1141 KLAVDNKKPKPGGTHNPSGFPVE--XXXXXXXXXXXXMPQYGAAANTY-GPPFSN 986
            K AVDNKKPKP G  NPSGFPV+               PQYGA  N+Y   P+ N
Sbjct: 236  KFAVDNKKPKPVG-QNPSGFPVDNSNVNYHPPNPTMMPPQYGAPPNSYVQQPYGN 289



 Score = 72.4 bits (176), Expect = 4e-10
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = -2

Query: 767 CFVQLCDGFLGANALNGCADFVHADNEIFGFGFMD 663
           CFVQLCDGFLGA+ALNGCADFVHA+NEIFG G+MD
Sbjct: 352 CFVQLCDGFLGASALNGCADFVHAENEIFGPGYMD 386


>ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816590 [Glycine max]
          Length = 384

 Score =  408 bits (1048), Expect = e-111
 Identities = 222/309 (71%), Positives = 245/309 (79%), Gaps = 17/309 (5%)
 Frame = -3

Query: 1861 MDFSKKRKTEENGDA--NSPPPSAEXXXXXXXXT------LASEDIRRILQPFTQEQLLD 1706
            M+F KKRKT+ENGD   +SPPP +         T      LASEDIR+ILQPF+QEQLLD
Sbjct: 1    MEFPKKRKTQENGDTTTDSPPPQSTEEAPLAAATPAPASPLASEDIRKILQPFSQEQLLD 60

Query: 1705 LLQSASLRHPDVLDAVRSVADRDTTLRKLFVRGLAGDTTTDTLRAVFSAYGDLDEAIVIF 1526
            LLQSASLRHPDVLDAVR+VAD D+TLRKLFVRGLAG+TTT+TLR+VFS +G+LDEAIVI 
Sbjct: 61   LLQSASLRHPDVLDAVRAVADCDSTLRKLFVRGLAGETTTETLRSVFSGFGELDEAIVIM 120

Query: 1525 DKSTGRSKGYGFVVFRHVDGAILALKEPSKKIDGRMTVTQLAAAGAGSTGGDVSARKVFV 1346
            DK+TGRSKGYGFVVFRHVDGAILALK+PSKKIDGRMTVTQLAAAG G  GGDVS RKVFV
Sbjct: 121  DKATGRSKGYGFVVFRHVDGAILALKDPSKKIDGRMTVTQLAAAG-GPGGGDVSLRKVFV 179

Query: 1345 GNVPFEISSERLLSEFLKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGARASLMEPLKT 1166
            GNVPFEISSERLL EFLK+GE+EEGPLGFDK+SGK+RGFAFFVYKTEEGARASL+EPLKT
Sbjct: 180  GNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGARASLVEPLKT 239

Query: 1165 IEGHQVICKLAVDNKKPKPGGTHNPSGFPVEXXXXXXXXXXXXMPQYGA-AANTYG---- 1001
            IEGHQVICKLAVDNKK KP GT                     +PQYG    N YG    
Sbjct: 240  IEGHQVICKLAVDNKKTKPFGTDQHQHQQQHPQQQMQQQVSMMVPQYGGYGGNGYGMQQQ 299

Query: 1000 ----PPFSN 986
                PP++N
Sbjct: 300  QHQVPPYNN 308


>ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Glycine max]
          Length = 384

 Score =  404 bits (1037), Expect = e-110
 Identities = 219/309 (70%), Positives = 239/309 (77%), Gaps = 17/309 (5%)
 Frame = -3

Query: 1861 MDFSKKRKTEENGDANSPPPSAEXXXXXXXXT----LASEDIRRILQPFTQEQLLDLLQS 1694
            M+F+KKRKTEENGD    PP                LA+EDIR+ILQPF+QEQLLDLLQS
Sbjct: 1    MEFTKKRKTEENGDTTDYPPQQSTEESPIAAAAPAPLAAEDIRKILQPFSQEQLLDLLQS 60

Query: 1693 ASLRHPDVLDAVRSVADRDTTLRKLFVRGLAGDTTTDTLRAVFSAYGDLDEAIVIFDKST 1514
            ASLRHPDVLDAVR+VAD D+TLRKLFVRGLAG+TTT+TLR VFSA+G+LDEAIVI DK+T
Sbjct: 61   ASLRHPDVLDAVRAVADLDSTLRKLFVRGLAGETTTETLRGVFSAFGELDEAIVIIDKAT 120

Query: 1513 GRSKGYGFVVFRHVDGAILALKEPSKKIDGRMTVTQLAAAGAGSTGGDVSARKVFVGNVP 1334
            GRSKGYGFVVF HVDGAILALKEPSKKIDGRMTVTQLAAAG G  GGDVS RKVFVGNVP
Sbjct: 121  GRSKGYGFVVFSHVDGAILALKEPSKKIDGRMTVTQLAAAG-GPGGGDVSLRKVFVGNVP 179

Query: 1333 FEISSERLLSEFLKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGARASLMEPLKTIEGH 1154
            FEISSERLL EFLK+GE+EEGPLGFDK+SGK+RGFAFFVYKTEEGARASL+EPLKTIEGH
Sbjct: 180  FEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGARASLVEPLKTIEGH 239

Query: 1153 QVICKLAVDNKKPKP--GGTHNPSGFPVEXXXXXXXXXXXXMPQYGA-AANTYG------ 1001
            QVICKLAVDNKK KP     H                    +PQYG    N YG      
Sbjct: 240  QVICKLAVDNKKTKPFVADQHQQQHHQQHPQQQMQQQGSMMVPQYGGYGGNGYGMQQQQQ 299

Query: 1000 ----PPFSN 986
                PP++N
Sbjct: 300  QHQVPPYNN 308


>ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
            communis] gi|223538254|gb|EEF39863.1| Heterogeneous
            nuclear ribonucleoprotein A1, putative [Ricinus communis]
          Length = 398

 Score =  330 bits (845), Expect = 1e-87
 Identities = 166/300 (55%), Positives = 226/300 (75%), Gaps = 13/300 (4%)
 Frame = -3

Query: 1861 MDFSKKRKTEENGDA-----NSPPPSAEXXXXXXXXTLASEDIRRILQPFTQEQLLDLLQ 1697
            MDF+KKRK +ENG       +SPPP+           L+ +DIR+I++PFT+EQLL++LQ
Sbjct: 1    MDFTKKRKADENGTTTITTTSSPPPTTT---------LSPQDIRKIIEPFTKEQLLEILQ 51

Query: 1696 SASLRHPDVLDAVRSVADRDTTLRKLFVRGLAGDTTTDTLRAVFSAYGDLDEAIVIFDKS 1517
            +A+ RH DVL++VR++AD D +LRKLF+RGL+ +TTT+T+R +F+ YG+L+EAIVIFDK+
Sbjct: 52   NAATRHADVLESVRTLADSDISLRKLFIRGLSSETTTETIRNLFNNYGELEEAIVIFDKN 111

Query: 1516 TGRSKGYGFVVFRHVDGAILALKEPSKKIDGRMTVTQLAAAGAGST-------GGDVSAR 1358
            TG+SKG+GF+ F+HVDGA++ALKEPSKKIDGRMTVTQLA+AG  ++       G DVSAR
Sbjct: 112  TGKSKGFGFITFKHVDGALIALKEPSKKIDGRMTVTQLASAGLSNSSINSSGGGSDVSAR 171

Query: 1357 KVFVGNVPFEISSERLLSEFLKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGARASLME 1178
            K++VGNVP+ I SERLL  FL YGE+EEGPLGFDK++GK++GFAF +YKTEEGA+A++ +
Sbjct: 172  KIYVGNVPYNIPSERLLGFFLNYGEVEEGPLGFDKSTGKSKGFAFIIYKTEEGAKAAIAD 231

Query: 1177 PLKTIEGHQVICKLAV-DNKKPKPGGTHNPSGFPVEXXXXXXXXXXXXMPQYGAAANTYG 1001
            P+K I+GHQV+CK+AV +NKK K  G+   +   V+             PQ   + N YG
Sbjct: 232  PVKMIDGHQVVCKMAVANNKKVKTHGSSGENNVQVQ-SQPQPQPLPQQQPQSSMSGNQYG 290


>ref|XP_002305079.1| predicted protein [Populus trichocarpa] gi|222848043|gb|EEE85590.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  321 bits (823), Expect = 4e-85
 Identities = 168/300 (56%), Positives = 224/300 (74%), Gaps = 14/300 (4%)
 Frame = -3

Query: 1861 MDFSKKRKTEENG---DANSPPPSAEXXXXXXXXTLASEDIRRILQPFTQEQLLDLLQSA 1691
            M+F KKRK EENG      + PPS           L  E+IR+IL+PFT++QLLD+LQSA
Sbjct: 1    MEFIKKRKAEENGISIPTGTSPPSP-------ITPLTPEEIRKILEPFTKDQLLDILQSA 53

Query: 1690 SLRHPDVLDAVRSVADRDTTLRKLFVRGLAGDTTTDTLRAVFSAYGDLDEAIVIFDKSTG 1511
            +L H D+L++VRSVAD D +LRKLF+RGL+ +TT+DTLR +FS++G+L+EAIVI DK+TG
Sbjct: 54   TLHHSDILNSVRSVADGDISLRKLFIRGLSSETTSDTLRILFSSFGELEEAIVIHDKNTG 113

Query: 1510 RSKGYGFVVFRHVDGAILALKEPSKKIDGRMTVTQLAAAGAGSTGGDVSARKVFVGNVPF 1331
            +SKG+GF+ F+HVD A+L+++EPSKKIDGR+TVTQLA+    S+ GDVS RKV+VGNVPF
Sbjct: 114  KSKGFGFITFKHVDSAMLSIREPSKKIDGRITVTQLAS--NNSSTGDVSLRKVYVGNVPF 171

Query: 1330 EISSERLLSEFLKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGARASLMEPLKTIEGHQ 1151
            EI+SERLL  F  YGEIEEGPLGFDK++GK++GFAF +YK+E+GA+A++ +P+K I+GHQ
Sbjct: 172  EITSERLLGFFSMYGEIEEGPLGFDKSTGKSKGFAFLIYKSEDGAKAAIADPMKNIDGHQ 231

Query: 1150 VICKLAVDNK---KPKPGGTH--------NPSGFPVEXXXXXXXXXXXXMPQYGAAANTY 1004
            V+CKLAVDNK   K   GG +        +PS FP              +  YG+A+N+Y
Sbjct: 232  VVCKLAVDNKRVNKTSQGGANAQNSQPLAHPS-FPQPQPQNSIGGVTGSLQNYGSASNSY 290


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